Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001303g0160 Nicotiana tabacum HOM05D003810 ORTHO05D004416 1.1e-153 546.6 266 100.0
Nitab4.5_0000611g0250 Nicotiana tabacum HOM05D003810 ORTHO05D004416 1.3e-18 97.8 209 36.8
Nitab4.5_0001622g0070 Nicotiana tabacum HOM05D003810 ORTHO05D004416 2.2e-18 97.1 209 36.8
Dinv40895 Davidia involucrata HOM05D003810 ORTHO05D004416 1.6e-16 90.9 208 35.6
Cc00_g20590 Coffea canephora HOM05D003810 ORTHO05D004416 2.7e-16 90.1 211 34.6
Solyc10g005900.3 Solanum lycopersicum HOM05D003810 ORTHO05D004416 3.6e-16 89.7 209 34.0
Sopen10g001850 Solanum pennellii HOM05D003810 ORTHO05D004416 3.6e-16 89.7 209 34.0
CAN.G492.44 Capsicum annuum HOM05D003810 ORTHO05D004416 1.0e-15 88.2 210 34.8
Peaxi162Scf00212g00616 Petunia axillaris HOM05D003810 ORTHO05D004416 1.4e-15 87.8 209 34.0
Lj3A773G17 Lonicera japonica HOM05D003810 ORTHO05D004416 1.1e-14 84.7 197 36.5
Hma1.2p1_0193F.1_g084130 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 9.7e-14 81.6 206 35.4
CSS0024914 Camellia sinensis var. sinensis HOM05D003810 ORTHO05D004416 1.3e-13 81.3 218 31.2
Eucgr.J01409 Eucalyptus grandis HOM05D003810 ORTHO05D004416 3.7e-13 79.7 203 33.5
Dinv10375 Davidia involucrata HOM05D003810 ORTHO05D004416 4.8e-13 79.3 178 33.1
Migut.H01729 Erythranthe guttata HOM05D003810 ORTHO05D004416 8.2e-13 78.6 215 28.4
unitig_61.g26129 Utricularia gibba HOM05D003810 ORTHO05D004416 8.2e-13 78.6 198 29.3
Atru.chr12.1053 Acer truncatum HOM05D003810 ORTHO05D004416 1.1e-12 78.2 203 32.5
COL.COLO4_25217 Corchorus olitorius HOM05D003810 ORTHO05D004416 1.1e-12 78.2 209 33.0
MD15G1441400 Malus domestica HOM05D003810 ORTHO05D004416 1.1e-12 78.2 208 30.3
Lj3C711T10 Lonicera japonica HOM05D003810 ORTHO05D004416 1.4e-12 77.8 212 34.0
Thecc.09G267400 Theobroma cacao HOM05D003810 ORTHO05D004416 2.4e-12 77.0 211 30.3
Duzib150G1314 Durio zibethinus HOM05D003810 ORTHO05D004416 3.1e-12 76.6 211 32.2
GSVIVG01014785001 Vitis vinifera HOM05D003810 ORTHO05D004416 3.1e-12 76.6 214 31.8
AUR62015172 Chenopodium quinoa HOM05D003810 ORTHO05D004416 4.1e-12 76.3 214 29.9
Nn2g14662 Nelumbo nucifera HOM05D003810 ORTHO05D004416 4.1e-12 76.3 204 31.4
Rhsim04G0009500 Rhododendron simsii HOM05D003810 ORTHO05D004416 5.3e-12 75.9 196 34.7
Haze_09895 Corylus avellana HOM05D003810 ORTHO05D004416 9.1e-12 75.1 188 32.4
Aqoxy3G00950 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 1.6e-11 74.3 203 29.1
Atru.chr2.3847 Acer truncatum HOM05D003810 ORTHO05D004416 2.0e-11 73.9 217 30.9
ClCG04G003010 Citrullus lanatus HOM05D003810 ORTHO05D004416 2.0e-11 73.9 181 32.0
Gohir.D07G118250 Gossypium hirsutum HOM05D003810 ORTHO05D004416 2.0e-11 73.9 211 29.9
Cfa016940 Carpinus fangiana HOM05D003810 ORTHO05D004416 2.6e-11 73.6 208 31.2
Gohir.A07G114448 Gossypium hirsutum HOM05D003810 ORTHO05D004416 2.6e-11 73.6 211 29.9
Gorai.001G127200 Gossypium raimondii HOM05D003810 ORTHO05D004416 2.6e-11 73.6 198 31.3
Oeu062684.4 Olea europaea HOM05D003810 ORTHO05D004416 2.6e-11 73.6 45 82.2
PSO063G0853 Papaver somniferum HOM05D003810 ORTHO05D004416 2.6e-11 73.6 208 29.3
PSO782G5597 Papaver somniferum HOM05D003810 ORTHO05D004416 2.6e-11 73.6 208 29.3
arahy.Tifrunner.gnm1.ann1.60T2A8 Arachis hypogaea HOM05D003810 ORTHO05D004416 3.5e-11 73.2 179 32.4
ECA246G2898 Erigeron canadensis HOM05D003810 ORTHO05D004416 3.5e-11 73.2 196 32.7
Lj1A897G42 Lonicera japonica HOM05D003810 ORTHO05D004416 5.9e-11 72.4 45 80.0
Prupe.1G583500 Prunus persica HOM05D003810 ORTHO05D004416 5.9e-11 72.4 202 30.2
AUR62017624 Chenopodium quinoa HOM05D003810 ORTHO05D004416 7.7e-11 72.0 224 28.6
arahy.Tifrunner.gnm1.ann1.KKS8QY Arachis hypogaea HOM05D003810 ORTHO05D004416 1.0e-10 71.6 200 30.5
Ciclev10007802m.g Citrus clementina HOM05D003810 ORTHO05D004416 1.0e-10 71.6 205 32.7
FAN02G2818 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.0e-10 71.6 257 30.4
Sc14g0003560 Simmondsia chinensis HOM05D003810 ORTHO05D004416 1.0e-10 71.6 209 28.7
SGA_v2.0_scaffold42G15939 Striga asiatica HOM05D003810 ORTHO05D004416 1.0e-10 71.6 45 75.6
Zm00001eb172700 Zea mays HOM05D003810 ORTHO05D004416 1.0e-10 71.6 208 29.8
Lsat_1_v5_gn_1_66020 Lactuca sativa HOM05D003810 ORTHO05D004416 1.3e-10 71.2 206 33.0
CiPaw.11G208700 Carya illinoinensis HOM05D003810 ORTHO05D004416 1.7e-10 70.9 196 29.6
Ah.01g013210 Amaranthus hybridus HOM05D003810 ORTHO05D004416 2.2e-10 70.5 45 75.6
SGA_v2.0_scaffold146G36126 Striga asiatica HOM05D003810 ORTHO05D004416 2.2e-10 70.5 174 32.2
Actinidia00838 Actinidia chinensis HOM05D003810 ORTHO05D004416 2.9e-10 70.1 44 79.5
MSTRG.13036 Avicennia marina HOM05D003810 ORTHO05D004416 2.9e-10 70.1 45 77.8
vmacro09609 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 2.9e-10 70.1 212 30.2
vmacro22299 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 2.9e-10 70.1 212 30.2
Os08g0338200 Oryza sativa ssp. japonica HOM05D003810 ORTHO05D004416 3.8e-10 69.7 198 31.3
TAR627G1185 Trochodendron aralioides HOM05D003810 ORTHO05D004416 3.8e-10 69.7 193 31.6
PGR042G2745 Punica granatum HOM05D003810 ORTHO05D004416 5.0e-10 69.3 247 26.3
Rhsim05G0134800 Rhododendron simsii HOM05D003492 ORTHO05D005115 8.5e-10 68.6 145 33.1
EL10Ac9g22878 Beta vulgaris HOM05D003810 ORTHO05D004416 1.1e-09 68.2 45 73.3
MELO3C020474.2 Cucumis melo HOM05D003810 ORTHO05D004416 1.1e-09 68.2 209 31.1
Aqoxy7G03331 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 1.5e-09 67.8 213 29.1
Cpa.g.sc181.12 Carica papaya HOM05D003810 ORTHO05D004416 1.5e-09 67.8 196 30.1
MBI15_g00877_MAGBIO Magnolia biondii HOM05D003810 ORTHO05D004416 1.5e-09 67.8 45 75.6
CsaV3_4G027560 Cucumis sativus L. HOM05D003810 ORTHO05D004416 1.9e-09 67.4 209 31.6
QL08p001596 Quercus lobata HOM05D003810 ORTHO05D004416 1.9e-09 67.4 201 30.8
TAR627G1127 Trochodendron aralioides HOM05D003810 ORTHO05D004416 1.9e-09 67.4 45 73.3
CDE04G2581 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 2.5e-09 67.0 195 28.7
HanXRQChr05g0160211 Helianthus annuus HOM05D003810 ORTHO05D004416 2.5e-09 67.0 45 75.6
Aa31LG10G490 Aethionema arabicum HOM05D003810 ORTHO05D004416 3.2e-09 66.6 210 28.6
Lj1A897G41 Lonicera japonica HOM05D003810 ORTHO05D004416 3.2e-09 66.6 225 28.4
HPP92_028601 Vanilla planifolia HOM05D003810 ORTHO05D004416 3.2e-09 66.6 196 29.1
Aqoxy2G00893 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 4.2e-09 66.2 45 71.1
THA.LOC104815683 Tarenaya hassleriana HOM05D003810 ORTHO05D004416 5.5e-09 65.9 211 28.9
Prupe.5G213500 Prunus persica HOM05D003810 ORTHO05D004416 7.2e-09 65.5 192 30.7
Prupe.5G046900 Prunus persica HOM05D003810 ORTHO05D004416 9.4e-09 65.1 192 30.2
AT3G61420 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 1.2e-08 64.7 204 28.9
AL5G43720 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 1.6e-08 64.3 205 28.3
RcHm_v2.0_Chr7g0221221 Rosa chinensis HOM05D003810 ORTHO05D004416 2.1e-08 63.9 193 29.5
VMungo0720G2836 Vigna mungo HOM05D003810 ORTHO05D004416 2.1e-08 63.9 204 29.4
Carub.0001s4426 Capsella rubella HOM05D003810 ORTHO05D004416 3.6e-08 63.2 202 29.7
Thhalv10011333m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 4.7e-08 62.8 211 28.0
FAN05G0299 Fragaria x ananassa HOM05D003810 ORTHO05D010162 4.7e-08 62.8 178 29.2
ATR0751G036 Amborella trichopoda HOM05D003810 ORTHO05D004416 6.1e-08 62.4 75 46.7
CARHR045410 Cardamine hirsuta HOM05D003810 ORTHO05D004416 6.1e-08 62.4 45 66.7
FAN04G0096 Fragaria x ananassa HOM05D003810 ORTHO05D004416 6.1e-08 62.4 45 66.7
FAN18G3759 Fragaria x ananassa HOM05D003810 ORTHO05D004416 6.1e-08 62.4 45 66.7
Lsat_1_v5_gn_9_33460 Lactuca sativa HOM05D003810 ORTHO05D004416 6.1e-08 62.4 45 75.6
BcaB05g24435 Brassica carinata HOM05D003810 ORTHO05D004416 8.0e-08 62.0 208 28.4
FvH4_5g28910 Fragaria vesca HOM05D003810 ORTHO05D004416 8.0e-08 62.0 203 28.1
FAN02G0111 Fragaria x ananassa HOM05D003810 ORTHO05D004416 8.0e-08 62.0 176 33.5
Glyma.20G197500 Glycine max HOM05D003810 ORTHO05D004416 8.0e-08 62.0 204 28.9
Sed0019869 Sechium edule HOM05D003810 ORTHO05D004416 8.0e-08 62.0 45 66.7
TPR.G13386 Trifolium pratense HOM05D003810 ORTHO05D004416 8.0e-08 62.0 200 28.0
A02p15760 Brassica napus HOM05D003810 ORTHO05D004416 1.0e-07 61.6 45 64.4
BraA02t06637Z Brassica rapa HOM05D003810 ORTHO05D004416 1.0e-07 61.6 45 64.4
Phvul.007G134900 Phaseolus vulgaris HOM05D003810 ORTHO05D004416 1.0e-07 61.6 204 28.9
Sp5g24310 Schrenkiella parvula HOM05D003810 ORTHO05D004416 1.0e-07 61.6 75 46.7
AL1G63840 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 1.4e-07 61.2 75 46.7
AT1G55750 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 1.4e-07 61.2 201 28.9
Glyma.10G193000 Glycine max HOM05D003810 ORTHO05D004416 1.8e-07 60.8 204 28.9
BcaC03g15064 Brassica carinata HOM05D003810 ORTHO05D004416 2.3e-07 60.5 75 44.0
C02p26210 Brassica napus HOM05D003810 ORTHO05D004416 2.3e-07 60.5 75 44.0
BolC2t08687H Brassica oleracea HOM05D003810 ORTHO05D004416 2.3e-07 60.5 75 44.0
CANSAT11G0157 Cannabis sativa HOM05D003810 ORTHO05D004416 2.3e-07 60.5 74 48.6
Potri.005G061432 Populus trichocarpa HOM05D003810 ORTHO05D004416 2.3e-07 60.5 256 25.8
Hund17711 Selenicereus undatus HOM05D003810 ORTHO05D004416 2.3e-07 60.5 41 70.7
Lj5g0018758 Lotus japonicus HOM05D003810 ORTHO05D004416 3.0e-07 60.1 204 29.4
Medtr6g071555 Medicago truncatula HOM05D003810 ORTHO05D004416 3.0e-07 60.1 201 27.4
Hund17709 Selenicereus undatus HOM05D003810 ORTHO05D004416 4.0e-07 59.7 202 28.2
TWI23G0485 Tripterygium wilfordii HOM05D003810 ORTHO05D004416 4.0e-07 59.7 200 28.5
DCAR_017597 Daucus carota HOM05D003810 ORTHO05D004416 5.2e-07 59.3 262 28.2
Psat6g170400 Pisum sativum HOM05D003810 ORTHO05D004416 5.2e-07 59.3 200 27.0
FAN14G4445 Fragaria x ananassa HOM05D003810 ORTHO05D004416 6.7e-07 58.9 193 28.5
CARHR219980 Cardamine hirsuta HOM05D003810 ORTHO05D004416 8.8e-07 58.5 45 62.2
FvH4_6g25000 Fragaria vesca HOM05D003810 ORTHO05D004416 8.8e-07 58.5 193 28.5
Potri.005G061366 Populus trichocarpa HOM05D003810 ORTHO05D004416 8.8e-07 58.5 46 56.5
FAN02G0356 Fragaria x ananassa HOM05D003810 ORTHO05D004416 2.0e-06 57.4 149 33.6
Ca_10408_v3 Cicer arietinum L. HOM05D003810 ORTHO05D004416 2.6e-06 57.0 45 62.2
Duzib168G0397 Durio zibethinus HOM05D003810 ORTHO05D004416 3.3e-06 56.6 45 62.2
FAN08G2973 Fragaria x ananassa HOM05D003810 ORTHO05D004416 4.4e-06 56.2 45 64.4
SMO031G0001 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 4.4e-06 56.2 45 55.6
SMO228G0023 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 4.4e-06 56.2 45 55.6
TAR629G3163 Trochodendron aralioides HOM05D003810 ORTHO05D004416 4.4e-06 56.2 165 27.3
ClCG09G022970 Citrullus lanatus HOM05D003810 ORTHO05D004416 5.7e-06 55.8 45 62.2
Hma1.2p1_2995F.1_g331430 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 5.7e-06 55.8 69 53.6
Manes.02G224100 Manihot esculenta HOM05D003810 ORTHO05D004416 7.5e-06 55.5 47 53.2
Potri.007G107400 Populus trichocarpa HOM05D003810 ORTHO05D004416 7.5e-06 55.5 246 26.4


User provided reference genes

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