Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001027g0140 Nicotiana tabacum HOM05D001426 ORTHO05D000022 1.2e-91 339.7 166 100.0
Nitab4.5_0010722g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000022 2.1e-14 83.2 103 36.9
Sopen04g014310 Solanum pennellii HOM05D000155 ORTHO05D000022 3.0e-13 79.3 114 35.1
Nitab4.5_0000512g0090 Nicotiana tabacum HOM05D011511 ORTHO05D000022 5.1e-13 78.6 101 38.6
Nitab4.5_0008471g0050 Nicotiana tabacum HOM05D011511 ORTHO05D000022 3.3e-12 75.9 101 36.6
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-11 73.6 107 32.7
Sopen00g003380 Solanum pennellii HOM05D000155 ORTHO05D000022 2.2e-11 73.2 113 31.0
Sopen00g003540 Solanum pennellii HOM05D000003 ORTHO05D000004 2.2e-11 73.2 113 31.0
Nitab4.5_0008964g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.8e-11 72.0 88 38.6
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-10 70.9 97 36.1
Sopen07g021380 Solanum pennellii HOM05D000155 ORTHO05D000034 1.1e-10 70.9 101 38.6
PGSC0003DMG400035792 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.8e-10 70.1 112 28.6
PGSC0003DMG400015911 Solanum tuberosum HOM05D000003 ORTHO05D001389 2.4e-10 69.7 101 35.6
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 3.1e-10 69.3 111 29.7
Sopen08g015240 Solanum pennellii HOM05D000003 ORTHO05D000004 3.1e-10 69.3 113 30.1
Sopen00g012040 Solanum pennellii HOM05D000003 ORTHO05D000004 4.1e-10 68.9 97 34.0
Nitab4.5_0000754g0070 Nicotiana tabacum HOM05D009916 ORTHO05D000022 5.3e-10 68.6 61 44.3
PGSC0003DMG400046872 Solanum tuberosum HOM05D000003 ORTHO05D000022 5.3e-10 68.6 102 36.3
PGSC0003DMG400040069 Solanum tuberosum HOM05D000155 ORTHO05D000022 6.9e-10 68.2 105 34.3
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 9.1e-10 67.8 101 30.7
Sopen06g007150 Solanum pennellii HOM05D000003 ORTHO05D000004 9.1e-10 67.8 108 30.6
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 9.1e-10 67.8 101 30.7
Peaxi162Scf00059g00130 Petunia axillaris HOM05D001426 ORTHO05D001389 1.2e-09 67.4 106 35.8
Sopen08g015180 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-09 67.4 101 31.7
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 1.5e-09 67.0 102 30.4
Sopen03g008140 Solanum pennellii HOM05D000014 ORTHO05D000016 2.0e-09 66.6 111 29.7
Nitab4.5_0001170g0060 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.6e-09 66.2 108 34.3
Sopen09g009790 Solanum pennellii HOM05D000155 ORTHO05D000022 4.5e-09 65.5 100 32.0
PGSC0003DMG400021434 Solanum tuberosum HOM05D001426 ORTHO05D000022 5.9e-09 65.1 99 35.4
Sopen09g015010 Solanum pennellii HOM05D000003 ORTHO05D000022 7.7e-09 64.7 102 31.4
PGSC0003DMG400035850 Solanum tuberosum HOM05D000003 ORTHO05D000022 7.7e-09 64.7 156 28.2
PGSC0003DMG400040103 Solanum tuberosum HOM05D000003 ORTHO05D000022 1.0e-08 64.3 107 31.8
Cc05_g02910 Coffea canephora HOM05D000003 ORTHO05D000004 1.3e-08 63.9 121 30.6
PGSC0003DMG400010787 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.3e-08 63.9 106 34.0
PGSC0003DMG402031434 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.3e-08 63.9 97 30.9
PGSC0003DMG400045895 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.7e-08 63.5 200 24.5
Cc03_g15170 Coffea canephora HOM05D000025 ORTHO05D000022 2.9e-08 62.8 92 38.0
Nitab4.5_0000333g0040 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.8e-08 62.4 113 32.7
Sopen11g015660 Solanum pennellii HOM05D000003 ORTHO05D023159 3.8e-08 62.4 113 28.3
PGSC0003DMG401009742 Solanum tuberosum HOM05D001426 ORTHO05D001389 5.0e-08 62.0 99 33.3
Nitab4.5_0000249g0360 Nicotiana tabacum HOM05D009916 ORTHO05D000022 6.5e-08 61.6 97 33.0
Nitab4.5_0000417g0090 Nicotiana tabacum HOM05D009916 ORTHO05D000022 6.5e-08 61.6 114 29.8
Nitab4.5_0000147g0150 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.5e-08 61.2 113 32.7
Cc00_g03270 Coffea canephora HOM05D000155 ORTHO05D000022 1.1e-07 60.8 92 39.1
Nitab4.5_0006480g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.1e-07 60.8 108 30.6
Nitab4.5_0007438g0060 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.1e-07 60.8 101 32.7
Cc00_g15230 Coffea canephora HOM05D000155 ORTHO05D000022 1.4e-07 60.5 99 35.4
Cc00_g21050 Coffea canephora HOM05D000155 ORTHO05D000022 1.4e-07 60.5 99 35.4
Cc00_g24940 Coffea canephora HOM05D000155 ORTHO05D000022 1.4e-07 60.5 99 35.4
Cc06_g22510 Coffea canephora HOM05D000155 ORTHO05D000022 1.4e-07 60.5 99 35.4
PGSC0003DMG400045833 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.4e-07 60.5 97 30.9
Sopen09g012310 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-07 60.1 99 31.3
Thecc.04G000200 Theobroma cacao HOM05D000155 ORTHO05D000022 1.9e-07 60.1 94 34.0
Nitab4.5_0000186g0090 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.2e-07 59.3 100 33.0
Peaxi162Scf00479g00117 Petunia axillaris HOM05D000155 ORTHO05D000022 4.2e-07 58.9 53 47.2
Peaxi162Scf00552g00012 Petunia axillaris HOM05D001426 ORTHO05D001389 4.2e-07 58.9 112 31.2
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 4.2e-07 58.9 96 32.3
Nitab4.5_0000031g0460 Nicotiana tabacum HOM05D009916 ORTHO05D000022 5.5e-07 58.5 95 34.7
Peaxi162Scf00492g00016 Petunia axillaris HOM05D001426 ORTHO05D001389 7.2e-07 58.2 112 30.4
PGSC0003DMG400012502 Solanum tuberosum HOM05D000003 ORTHO05D000004 7.2e-07 58.2 101 34.7
PGSC0003DMG400023605 Solanum tuberosum HOM05D000003 ORTHO05D000004 7.2e-07 58.2 101 34.7
Nitab4.5_0005029g0020 Nicotiana tabacum HOM05D011511 ORTHO05D000022 9.4e-07 57.8 107 31.8
PGSC0003DMG400008628 Solanum tuberosum HOM05D000155 ORTHO05D000022 9.4e-07 57.8 110 33.6
Nitab4.5_0001903g0110 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.2e-06 57.4 104 28.8
Peaxi162Scf00056g00119 Petunia axillaris HOM05D001426 ORTHO05D001389 1.2e-06 57.4 161 28.0
Sopen09g015050 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-06 57.0 96 31.2
Nitab4.5_0000061g0260 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.1e-06 56.6 98 31.6
Nitab4.5_0007662g0020 Nicotiana tabacum HOM05D000801 ORTHO05D001389 2.1e-06 56.6 90 34.4
Nitab4.5_0000957g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.7e-06 56.2 101 31.7
Nitab4.5_0001771g0080 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.7e-06 56.2 109 27.5
Peaxi162Scf00131g01713 Petunia axillaris HOM05D001426 ORTHO05D001389 2.7e-06 56.2 102 32.4
Lj7P241T13 Lonicera japonica HOM05D000155 ORTHO05D000022 3.6e-06 55.8 97 32.0
PGSC0003DMG400014002 Solanum tuberosum HOM05D000003 ORTHO05D001389 3.6e-06 55.8 96 31.2
Nitab4.5_0004409g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.7e-06 55.5 114 28.9
PGSC0003DMG400037811 Solanum tuberosum HOM05D000155 ORTHO05D000022 4.7e-06 55.5 100 28.0
Thecc.02G366600 Theobroma cacao HOM05D000003 ORTHO05D000006 4.7e-06 55.5 90 32.2
Nitab4.5_0000153g0160 Nicotiana tabacum HOM05D001426 ORTHO05D001389 7.9e-06 54.7 91 33.0
Nitab4.5_0006950g0060 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.9e-06 54.7 57 35.1
Peaxi162Scf00251g00097 Petunia axillaris HOM05D000155 ORTHO05D000022 7.9e-06 54.7 72 37.5
SHI49182 Sapria himalayana HOM05D000024 ORTHO05D000006 7.9e-06 54.7 112 31.2


User provided reference genes

Program Settings