Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001015g0070 Nicotiana tabacum HOM05D000216 ORTHO05D003638 4.8e-61 237.7 121 100.0
Lsat_1_v5_gn_3_17360 Lactuca sativa HOM05D000216 ORTHO05D003638 1.2e-30 136.7 123 63.4
CDE02G3154 Ceratophyllum demersum HOM05D000216 ORTHO05D003638 2.9e-29 132.1 164 51.2
CAN.G386.26 Capsicum annuum HOM05D000216 ORTHO05D003638 3.7e-29 131.7 157 52.9
QL93p0837_0003 Quercus lobata HOM05D000216 ORTHO05D003638 6.4e-29 131.0 153 54.2
Hund15942 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.4e-29 131.0 116 64.7
CSS0018496 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D003638 8.3e-29 130.6 177 48.0
Lalb_Chr07g0192171 Lupinus albus HOM05D000216 ORTHO05D003638 8.3e-29 130.6 167 50.9
LjContig00318g0018562 Lotus japonicus HOM05D000216 ORTHO05D003638 1.8e-28 129.4 153 53.6
Phvul.003G256800 Phaseolus vulgaris HOM05D000216 ORTHO05D003638 1.8e-28 129.4 153 53.6
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 2.4e-28 129.0 153 52.9
PSO548G0039 Papaver somniferum HOM05D000216 ORTHO05D003638 2.4e-28 129.0 153 52.9
DCAR_032472 Daucus carota HOM05D000216 ORTHO05D003638 3.2e-28 128.6 153 52.9
HanXRQChr08g0210201 Helianthus annuus HOM05D000216 ORTHO05D003638 3.2e-28 128.6 153 52.9
HanXRQChr10g0282501 Helianthus annuus HOM05D000216 ORTHO05D003638 3.2e-28 128.6 153 52.9
HanXRQChr11g0326631 Helianthus annuus HOM05D000216 ORTHO05D003638 3.2e-28 128.6 153 52.9
HanXRQChr13g0415501 Helianthus annuus HOM05D000216 ORTHO05D003638 3.2e-28 128.6 153 52.9
HanXRQCPg0579821 Helianthus annuus HOM05D000216 ORTHO05D003638 3.2e-28 128.6 153 52.9
Lsat_1_v5_gn_2_1641 Lactuca sativa HOM05D000216 ORTHO05D003638 3.2e-28 128.6 153 52.9
Lj2C1237G0 Lonicera japonica HOM05D000216 ORTHO05D003638 3.2e-28 128.6 153 52.9
Lj2C1238G11 Lonicera japonica HOM05D000216 ORTHO05D003638 3.2e-28 128.6 153 52.9
LjContig00489g0001571 Lotus japonicus HOM05D000216 ORTHO05D003638 3.2e-28 128.6 153 52.9
PGR111G0049 Punica granatum HOM05D000216 ORTHO05D003638 3.2e-28 128.6 153 52.9
RcHm_v2.0_CPg0502431 Rosa chinensis HOM05D000216 ORTHO05D003638 3.2e-28 128.6 153 52.9
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 3.2e-28 128.6 153 52.9
arahy.Tifrunner.gnm1.ann1.49E3RC Arachis hypogaea HOM05D000216 ORTHO05D003638 4.1e-28 128.3 153 52.3
arahy.Tifrunner.gnm1.ann1.77R9Y6 Arachis hypogaea HOM05D000216 ORTHO05D003638 4.1e-28 128.3 153 52.3
arahy.Tifrunner.gnm1.ann1.KPH33C Arachis hypogaea HOM05D000216 ORTHO05D003638 4.1e-28 128.3 153 52.3
Ciclev10013984m.g Citrus clementina HOM05D000216 ORTHO05D003638 5.4e-28 127.9 153 52.3
Medtr4g051103 Medicago truncatula HOM05D000216 ORTHO05D003638 5.4e-28 127.9 153 52.9
Psat0s2754g0240 Pisum sativum HOM05D000216 ORTHO05D003638 5.4e-28 127.9 153 52.9
Psat0s2961g0080 Pisum sativum HOM05D000216 ORTHO05D003638 5.4e-28 127.9 153 52.9
Psat0s3650g0160 Pisum sativum HOM05D000216 ORTHO05D003638 5.4e-28 127.9 153 52.9
Psat1g003880 Pisum sativum HOM05D000216 ORTHO05D003638 5.4e-28 127.9 153 52.9
Psat6g219400 Pisum sativum HOM05D000216 ORTHO05D003638 5.4e-28 127.9 153 52.9
Psat7g033680 Pisum sativum HOM05D000216 ORTHO05D003638 5.4e-28 127.9 153 52.9
Potri.013G139080 Populus trichocarpa HOM05D000216 ORTHO05D003638 5.4e-28 127.9 153 52.3
SalBow1G2877 Salvia bowleyana HOM05D000216 ORTHO05D003638 7.0e-28 127.5 153 52.3
Sed0006587 Sechium edule HOM05D000216 ORTHO05D003638 7.0e-28 127.5 153 52.3
Sed0012920 Sechium edule HOM05D000216 ORTHO05D003638 7.0e-28 127.5 153 52.3
ATCG00150 Arabidopsis thaliana HOM05D000216 ORTHO05D003638 1.6e-27 126.3 153 52.9
Sed0015108 Sechium edule HOM05D000216 ORTHO05D003638 1.6e-27 126.3 153 52.3
Zm00001eb435250 Zea mays HOM05D000216 ORTHO05D003638 1.6e-27 126.3 153 51.6
Zm00001eb435460 Zea mays HOM05D000216 ORTHO05D003638 1.6e-27 126.3 153 51.6
Zm00001eb435730 Zea mays HOM05D000216 ORTHO05D003638 1.6e-27 126.3 153 51.6
Zm00001eb436810 Zea mays HOM05D000216 ORTHO05D003638 1.6e-27 126.3 153 51.6
Zm00001eb437240 Zea mays HOM05D000216 ORTHO05D003638 1.6e-27 126.3 153 51.6
Zm00001eb438330 Zea mays HOM05D000216 ORTHO05D003638 1.6e-27 126.3 153 51.6
Zm00001eb441010 Zea mays HOM05D000216 ORTHO05D003638 1.6e-27 126.3 153 51.6
Zm00001eb442740 Zea mays HOM05D000216 ORTHO05D003638 1.6e-27 126.3 153 51.6
Lsat_1_v5_gn_8_19261 Lactuca sativa HOM05D000216 ORTHO05D003638 2.0e-27 125.9 153 52.3
Medtr0002s0530 Medicago truncatula HOM05D000216 ORTHO05D003638 2.0e-27 125.9 153 51.0
EL10As12g24015 Beta vulgaris HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
AUR62012105 Chenopodium quinoa HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Medtr3g029550 Medicago truncatula HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Psat5g134680 Pisum sativum HOM05D000216 ORTHO05D003638 2.7e-27 125.6 159 50.9
Hund03957 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund18044 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund27559 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund27611 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund27865 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund27918 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund27995 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund28152 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund28178 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund28276 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund28388 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund28560 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund28651 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund28794 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund29068 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund29351 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund29741 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund29885 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund30206 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund30310 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund30432 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund30437 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund30852 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund31037 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Hund31056 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.7e-27 125.6 153 52.3
Ah.10g027620 Amaranthus hybridus HOM05D000216 ORTHO05D003638 4.6e-27 124.8 153 51.6
Ah.10g027780 Amaranthus hybridus HOM05D000216 ORTHO05D003638 4.6e-27 124.8 153 51.6
Ah.10g028520 Amaranthus hybridus HOM05D000216 ORTHO05D003638 4.6e-27 124.8 153 51.6
BNapus_Darmor_BZH_scaffold_253p00040 Brassica napus HOM05D000216 ORTHO05D003638 4.6e-27 124.8 153 52.3
BolSC37t60770H Brassica oleracea HOM05D000216 ORTHO05D003638 4.6e-27 124.8 153 52.3
BolSC45t60878H Brassica oleracea HOM05D000216 ORTHO05D003638 4.6e-27 124.8 153 52.3
BraSC151t45693Z Brassica rapa HOM05D000216 ORTHO05D003638 4.6e-27 124.8 153 52.3
BraSC59t46515Z Brassica rapa HOM05D000216 ORTHO05D003638 4.6e-27 124.8 153 52.3
CARHR281900 Cardamine hirsuta HOM05D000216 ORTHO05D003638 4.6e-27 124.8 153 52.3
unitig_91.g26494 Utricularia gibba HOM05D000216 ORTHO05D003638 4.6e-27 124.8 153 51.6
arahy.Tifrunner.gnm1.ann1.T8J8BP Arachis hypogaea HOM05D000216 ORTHO05D003638 1.0e-26 123.6 70 87.1
Migut.D01337 Erythranthe guttata HOM05D000216 ORTHO05D003638 1.7e-26 122.9 70 87.1
Manes.13G021650 Manihot esculenta HOM05D000216 ORTHO05D003638 1.7e-26 122.9 70 85.7
Hund27653 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.7e-26 122.9 153 51.6
MELO3C000995.2 Cucumis melo HOM05D000216 ORTHO05D003638 2.3e-26 122.5 69 88.4
Gohir.A10G169433 Gossypium hirsutum HOM05D000216 ORTHO05D003638 3.9e-26 121.7 70 85.7
HanXRQChr13g0425811 Helianthus annuus HOM05D000216 ORTHO05D003638 6.6e-26 120.9 70 85.7
Oeu028759.1 Olea europaea HOM05D000216 ORTHO05D003638 8.6e-26 120.6 157 48.4
Psat7g038960 Pisum sativum HOM05D000216 ORTHO05D003638 8.6e-26 120.6 153 51.0
BolSC45t60935H Brassica oleracea HOM05D000216 ORTHO05D003638 1.1e-25 120.2 70 87.1
CAN.G1185.18 Capsicum annuum HOM05D000216 ORTHO05D003638 1.1e-25 120.2 86 76.7
HanXRQChr12g0380621 Helianthus annuus HOM05D000216 ORTHO05D003638 1.1e-25 120.2 70 85.7
HanXRQChr14g0427991 Helianthus annuus HOM05D000216 ORTHO05D003638 1.5e-25 119.8 68 88.2
Psat2g044440 Pisum sativum HOM05D000216 ORTHO05D003518 1.5e-25 119.8 70 85.7
Gohir.A05G086000 Gossypium hirsutum HOM05D000216 ORTHO05D003638 1.9e-25 119.4 70 85.7
HanXRQChr00c0300g0573211 Helianthus annuus HOM05D000216 ORTHO05D003638 5.6e-25 117.9 67 88.1
BolSC29t60571H Brassica oleracea HOM05D000216 ORTHO05D003638 9.5e-25 117.1 69 85.5
CAN.G993.7 Capsicum annuum HOM05D000216 ORTHO05D003638 2.1e-24 115.9 70 82.9
SEGI_03518 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 2.1e-24 115.9 154 50.0
SEGI_24812 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 2.1e-24 115.9 154 50.0
SEGI_31181 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 2.1e-24 115.9 154 50.0
Psat0s1586g0120 Pisum sativum HOM05D000216 ORTHO05D003638 3.6e-24 115.2 69 82.6
arahy.Tifrunner.gnm1.ann1.M78D68 Arachis hypogaea HOM05D000216 ORTHO05D003638 6.2e-24 114.4 153 49.0
Gohir.A03G085501 Gossypium hirsutum HOM05D000216 ORTHO05D003638 6.2e-24 114.4 70 82.9
SEGI_00749 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 8.0e-24 114.0 164 48.2
Nn2g15011 Nelumbo nucifera HOM05D000216 ORTHO05D003638 2.3e-23 112.5 64 87.5
SEGI_26801 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 5.2e-23 111.3 71 81.7
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 1.2e-22 110.2 63 87.3
Nn092s42878 Nelumbo nucifera HOM05D000216 ORTHO05D003638 1.2e-22 110.2 65 84.6
SEGI_01684 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.2e-22 110.2 154 48.7
CARHR056700 Cardamine hirsuta HOM05D000216 ORTHO05D003638 1.5e-22 109.8 66 83.3
SEGI_02904 Sequoiadendron giganteum HOM05D000743 ORTHO05D000580 1.5e-22 109.8 89 70.8
Oeu022568.1 Olea europaea HOM05D000216 ORTHO05D003638 2.0e-22 109.4 70 80.0
Eucgr.A00333 Eucalyptus grandis HOM05D000216 ORTHO05D003638 2.6e-22 109.0 65 83.1
Mapoly0044s0072 Marchantia polymorpha HOM05D000216 ORTHO05D003638 3.4e-22 108.6 154 46.1
Medtr7g116680 Medicago truncatula HOM05D000216 ORTHO05D003638 3.4e-22 108.6 69 82.6
MD16G1100100 Malus domestica HOM05D000216 ORTHO05D003638 4.4e-22 108.2 70 80.0
Sed0022034 Sechium edule HOM05D000216 ORTHO05D003638 7.5e-22 107.5 103 62.1
SEGI_36364 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.3e-21 106.7 71 78.9
CDE02G2969 Ceratophyllum demersum HOM05D000216 ORTHO05D003638 4.9e-21 104.8 60 83.3
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 1.1e-20 103.6 68 79.4
Solyc00g500051.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.1e-20 103.6 75 77.3
Solyc00g500134.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.1e-20 103.6 75 77.3
Solyc00g500204.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.1e-20 103.6 75 77.3
Solyc00g500291.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.1e-20 103.6 75 77.3
Solyc00g500320.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.1e-20 103.6 75 77.3
Ah.05g176550 Amaranthus hybridus HOM05D000216 ORTHO05D003638 2.4e-20 102.4 62 83.9
AUR62042525 Chenopodium quinoa HOM05D000216 ORTHO05D000580 1.2e-19 100.1 60 81.7
Sed0017816 Sechium edule HOM05D000216 ORTHO05D003518 2.7e-19 99.0 68 75.0
TPR.G20776 Trifolium pratense HOM05D000216 ORTHO05D003638 6.0e-19 97.8 70 74.3
Ah.11g051390 Amaranthus hybridus HOM05D000013 ORTHO05D000011 1.5e-17 93.2 81 64.2
CAN.G229.14 Capsicum annuum HOM05D000216 ORTHO05D003638 3.3e-17 92.0 155 43.9
HanXRQChr00c0165g0572141 Helianthus annuus HOM05D000216 ORTHO05D003638 2.1e-16 89.4 134 47.8
SMO086G0032 Selaginella moellendorffii HOM05D000216 ORTHO05D003638 2.1e-16 89.4 71 66.2
CsaV3_UNG207830 Cucumis sativus L. HOM05D000216 ORTHO05D003638 3.6e-16 88.6 119 47.9
Solyc00g500335.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 8.1e-16 87.4 124 47.6
MELO3C027395.2 Cucumis melo HOM05D000216 ORTHO05D003638 5.2e-15 84.7 51 88.2
Hma1.2p1_0414F.1_g147690 Hydrangea macrophylla HOM05D000216 ORTHO05D003638 8.9e-15 84.0 132 44.7
HanXRQChr13g0425721 Helianthus annuus HOM05D000216 ORTHO05D003638 1.5e-14 83.2 51 86.3
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 1.5e-14 83.2 124 46.0
Sed0025462 Sechium edule HOM05D000216 ORTHO05D003638 4.4e-14 81.6 152 41.4
CAN.G517.19 Capsicum annuum HOM05D000216 ORTHO05D003638 7.5e-14 80.9 121 46.3
SGA_v2.0_scaffold95G28823 Striga asiatica HOM05D000216 ORTHO05D003638 2.2e-13 79.3 124 44.4
CAN.G201.5 Capsicum annuum HOM05D000216 ORTHO05D003638 2.9e-13 79.0 123 44.7
Psat0s2288g0040 Pisum sativum HOM05D000216 ORTHO05D003638 2.4e-12 75.9 120 43.3
Gorai.013G017800 Gossypium raimondii HOM05D000216 ORTHO05D003638 5.4e-12 74.7 135 41.5
MD16G1263300 Malus domestica HOM05D000216 ORTHO05D003638 7.1e-12 74.3 84 56.0
arahy.Tifrunner.gnm1.ann1.TG7LSU Arachis hypogaea HOM05D000216 ORTHO05D003638 1.6e-11 73.2 68 58.8
HanXRQChr00c0601g0576511 Helianthus annuus HOM05D000216 ORTHO05D003638 3.5e-11 72.0 151 37.7
Hund30593 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.0e-11 71.2 78 51.3
Gohir.D08G103720 Gossypium hirsutum HOM05D000216 ORTHO05D003518 1.0e-10 70.5 84 53.6
Solyc12g062630.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.7e-10 69.7 39 84.6
SEGI_31125 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 3.0e-10 68.9 48 72.9
Nitab4.5_0002175g0020 Nicotiana tabacum HOM05D000216 ORTHO05D003638 2.5e-09 65.9 101 48.5
Medtr0140s0070 Medicago truncatula HOM05D000216 ORTHO05D003638 3.3e-09 65.5 106 49.1
Hund20346 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.6e-09 64.7 134 40.3
arahy.Tifrunner.gnm1.ann1.3KQL5I Arachis hypogaea HOM05D000216 ORTHO05D003518 3.6e-08 62.0 33 93.9
CAN.G559.2 Capsicum annuum HOM05D000216 ORTHO05D003638 3.6e-08 62.0 37 78.4
HanXRQChr00c0492g0575101 Helianthus annuus HOM05D000216 ORTHO05D003638 3.6e-08 62.0 37 78.4
MD02G1261800 Malus domestica HOM05D000216 ORTHO05D003638 4.7e-08 61.6 45 71.1
Solyc08g028875.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 4.7e-08 61.6 84 53.6
Solyc07g021270.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 6.2e-08 61.2 60 55.0
Sc10g0008860 Simmondsia chinensis HOM05D000216 ORTHO05D003638 1.1e-07 60.5 29 100.0
Solyc12g035845.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 1.1e-07 60.5 52 67.3
Migut.D01412 Erythranthe guttata HOM05D000216 ORTHO05D003638 1.2e-06 57.0 37 75.7
Medtr6g025470 Medicago truncatula HOM05D000216 ORTHO05D003638 1.2e-06 57.0 119 37.8
HanXRQChr14g0428011 Helianthus annuus HOM05D000216 ORTHO05D003638 5.8e-06 54.7 29 79.3
HPP92_007916 Vanilla planifolia HOM05D000216 ORTHO05D003638 5.8e-06 54.7 26 88.5
Gorai.001G035800 Gossypium raimondii HOM05D000216 ORTHO05D003638 7.6e-06 54.3 28 92.9
Migut.L00411 Erythranthe guttata HOM05D000216 ORTHO05D003638 9.9e-06 53.9 108 40.7


User provided reference genes

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