Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001014g0070 Nicotiana tabacum HOM05D005480 ORTHO05D006735 3.4e-173 612.1 443 100.0
Nitab4.5_0000108g0300 Nicotiana tabacum HOM05D005480 ORTHO05D006735 6.3e-167 591.3 443 97.7
Peaxi162Scf00993g00022 Petunia axillaris HOM05D005480 ORTHO05D006735 1.4e-150 537.0 377 85.7
Sopen02g034920 Solanum pennellii HOM05D005480 ORTHO05D006735 5.9e-149 531.6 377 84.9
Solyc02g090230.4 Solanum lycopersicum HOM05D005480 ORTHO05D006735 1.0e-148 530.8 377 84.6
PGSC0003DMG400010074 Solanum tuberosum HOM05D005480 ORTHO05D006735 3.8e-148 528.9 377 83.6
CAN.G836.34 Capsicum annuum HOM05D005480 ORTHO05D006735 3.0e-145 519.2 364 89.0
Lj7A20T61 Lonicera japonica HOM05D005480 ORTHO05D006735 2.4e-126 456.4 380 71.3
CSS0014684 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 3.9e-124 449.1 377 73.7
Lj7A18T44 Lonicera japonica HOM05D005480 ORTHO05D006735 8.6e-124 448.0 388 69.6
Dinv39906 Davidia involucrata HOM05D005480 ORTHO05D006735 8.0e-122 441.4 380 67.4
Eucgr.H01972 Eucalyptus grandis HOM05D005480 ORTHO05D006735 5.2e-121 438.7 389 68.9
CSS0005424 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 4.4e-120 435.6 377 72.4
DCAR_021432 Daucus carota HOM05D005480 ORTHO05D006735 1.7e-119 433.7 379 69.4
Dinv26753 Davidia involucrata HOM05D005480 ORTHO05D006735 4.1e-118 429.1 278 83.1
vmacro05295 Vaccinium macrocarpon HOM05D005480 ORTHO05D006735 4.1e-118 429.1 363 75.5
MSTRG.23794 Avicennia marina HOM05D005480 ORTHO05D006735 9.2e-118 427.9 379 73.1
Cc07_g05560 Coffea canephora HOM05D005480 ORTHO05D006735 2.7e-117 426.4 379 66.0
Cfa004218 Carpinus fangiana HOM05D005480 ORTHO05D006735 1.3e-116 424.1 387 64.3
CiPaw.01G026500 Carya illinoinensis HOM05D005480 ORTHO05D006735 1.9e-115 420.2 388 64.2
QL06p043724 Quercus lobata HOM05D005480 ORTHO05D006735 5.6e-115 418.7 389 63.2
Actinidia12077 Actinidia chinensis HOM05D005480 ORTHO05D006735 7.3e-115 418.3 378 70.6
Gohir.A12G068600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 4.7e-114 415.6 386 71.5
MELO3C007529.2 Cucumis melo HOM05D005480 ORTHO05D006735 8.1e-114 414.8 384 62.0
Migut.H00485 Erythranthe guttata HOM05D005480 ORTHO05D006735 8.1e-114 414.8 412 68.9
Thecc.01G048100 Theobroma cacao HOM05D005480 ORTHO05D006735 8.1e-114 414.8 385 63.9
Hma1.2p1_0546F.1_g176180 Hydrangea macrophylla HOM05D005480 ORTHO05D006735 2.3e-113 413.3 380 69.2
Rhsim02G0168000 Rhododendron simsii HOM05D005480 ORTHO05D006735 4.0e-113 412.5 278 77.7
TAR625G1062 Trochodendron aralioides HOM05D005480 ORTHO05D006735 4.4e-112 409.1 389 63.8
Glyma.01G181500 Glycine max HOM05D005480 ORTHO05D006735 7.6e-112 408.3 381 63.8
TPR.G11349 Trifolium pratense HOM05D005480 ORTHO05D006735 9.9e-112 407.9 387 63.8
COL.COLO4_11327 Corchorus olitorius HOM05D005480 ORTHO05D006735 2.2e-111 406.8 276 77.9
PGR102G0042 Punica granatum HOM05D005480 ORTHO05D006735 2.2e-111 406.8 389 65.0
Gohir.D12G090600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 6.4e-111 405.2 378 65.1
CsaV3_6G042900 Cucumis sativus L. HOM05D005480 ORTHO05D006735 8.3e-111 404.8 386 61.1
Duzib187G0998 Durio zibethinus HOM05D005480 ORTHO05D006735 1.4e-110 404.1 391 65.0
MD15G1275400 Malus domestica HOM05D005480 ORTHO05D006735 3.2e-110 402.9 374 71.1
Gorai.008G072400 Gossypium raimondii HOM05D005480 ORTHO05D006735 9.2e-110 401.4 386 69.2
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 2.1e-109 400.2 278 76.3
Medtr5g018390 Medicago truncatula HOM05D005480 ORTHO05D006735 2.7e-109 399.8 384 65.1
TAR381G0420 Trochodendron aralioides HOM05D005480 ORTHO05D006735 4.6e-109 399.1 278 75.9
Duzib147G0741 Durio zibethinus HOM05D005480 ORTHO05D006735 6.0e-109 398.7 391 66.8
Lj2g0021055 Lotus japonicus HOM05D005480 ORTHO05D006735 6.0e-109 398.7 386 67.9
MBI16_g19897_MAGBIO Magnolia biondii HOM05D005480 ORTHO05D006735 7.8e-109 398.3 389 59.9
Potri.007G036600 Populus trichocarpa HOM05D005480 ORTHO05D006735 1.7e-108 397.1 279 76.7
Ciclev10025487m.g Citrus clementina HOM05D005480 ORTHO05D006735 3.0e-108 396.4 278 76.3
Sed0026694 Sechium edule HOM05D005480 ORTHO05D006735 6.6e-108 395.2 385 60.0
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 2.5e-107 393.3 390 61.8
MD02G1161300 Malus domestica HOM05D005480 ORTHO05D006735 2.1e-106 390.2 377 61.3
Glyma.11G059700 Glycine max HOM05D005480 ORTHO05D006735 2.8e-106 389.8 278 73.7
Lalb_Chr09g0322931 Lupinus albus HOM05D005480 ORTHO05D006735 2.8e-106 389.8 278 76.3
Sc03g0001260 Simmondsia chinensis HOM05D005480 ORTHO05D006735 2.8e-106 389.8 387 63.0
Manes.13G130100 Manihot esculenta HOM05D005480 ORTHO05D006735 4.7e-106 389.0 389 65.0
Psat2g164160 Pisum sativum HOM05D005480 ORTHO05D006735 1.1e-105 387.9 278 74.5
Phvul.002G022500 Phaseolus vulgaris HOM05D005480 ORTHO05D006735 2.4e-105 386.7 374 64.7
SGA_v2.0_scaffold15G07231 Striga asiatica HOM05D005480 ORTHO05D006735 4.0e-105 386.0 372 70.2
CANSAT01G1679 Cannabis sativa HOM05D005480 ORTHO05D006735 3.4e-104 382.9 386 64.2
THA.LOC104819823 Tarenaya hassleriana HOM05D005480 ORTHO05D006735 3.4e-104 382.9 279 72.8
FvH4_1g14810 Fragaria vesca HOM05D005480 ORTHO05D006735 9.9e-104 381.3 387 68.2
Prupe.7G142300 Prunus persica HOM05D005480 ORTHO05D006735 1.7e-103 380.6 391 59.6
FAN19G1500 Fragaria x ananassa HOM05D005480 ORTHO05D006735 2.9e-103 379.8 387 68.0
RcHm_v2.0_Chr2g0103771 Rosa chinensis HOM05D005480 ORTHO05D006735 2.9e-103 379.8 380 63.9
VMungo1215G2543 Vigna mungo HOM05D005480 ORTHO05D006735 2.9e-103 379.8 379 59.9
FAN28G0426 Fragaria x ananassa HOM05D005480 ORTHO05D006735 8.4e-103 378.3 279 72.8
Sabra07G0032600 Salix brachista HOM05D005480 ORTHO05D006735 8.4e-103 378.3 273 75.5
FAN23G2977 Fragaria x ananassa HOM05D005480 ORTHO05D006735 1.4e-102 377.5 381 67.5
ClCG01G016580 Citrullus lanatus HOM05D005480 ORTHO05D006735 4.2e-102 375.9 432 54.4
arahy.Tifrunner.gnm1.ann1.E9URZA Arachis hypogaea HOM05D005480 ORTHO05D006735 1.2e-101 374.4 278 73.7
FAN26G2127 Fragaria x ananassa HOM05D005480 ORTHO05D006735 1.2e-101 374.4 387 68.0
AUR62003828 Chenopodium quinoa HOM05D005480 ORTHO05D006735 7.8e-101 371.7 381 65.1
HanXRQChr04g0123741 Helianthus annuus HOM05D005480 ORTHO05D006735 3.9e-100 369.4 364 65.7
Oeu003952.2 Olea europaea HOM05D005480 ORTHO05D006735 6.6e-100 368.6 553 46.5
PSO170G5089 Papaver somniferum HOM05D005480 ORTHO05D006735 1.5e-99 367.5 278 71.6
Aqoxy5G01417 Aquilegia oxysepala HOM05D005480 ORTHO05D006735 2.5e-99 366.7 381 64.0
PSO210G7251 Papaver somniferum HOM05D005480 ORTHO05D006735 2.5e-99 366.7 278 71.6
Nn6g32121 Nelumbo nucifera HOM05D005480 ORTHO05D006735 7.3e-99 365.2 278 71.6
AL7G13910 Arabidopsis lyrata HOM05D005480 ORTHO05D006735 1.4e-97 360.9 284 70.1
AT4G37130 Arabidopsis thaliana HOM05D005480 ORTHO05D006735 1.8e-97 360.5 284 70.1
Thhalv10025060m.g Eutrema salsugineum HOM05D005480 ORTHO05D006735 1.8e-97 360.5 367 68.7
Hund13586 Selenicereus undatus HOM05D005480 ORTHO05D006735 3.1e-97 359.8 387 59.2
Carub.0007s0332 Capsella rubella HOM05D005480 ORTHO05D006735 5.3e-97 359.0 282 70.6
Aa31LG6G13860 Aethionema arabicum HOM05D005480 ORTHO05D006735 2.2e-95 353.6 280 68.2
Sp7g34650 Schrenkiella parvula HOM05D005480 ORTHO05D006735 2.2e-95 353.6 405 59.3
ECA232G3160 Erigeron canadensis HOM05D005480 ORTHO05D006735 4.9e-95 352.4 407 54.8
CARHR245380 Cardamine hirsuta HOM05D005480 ORTHO05D006735 1.4e-94 350.9 285 68.4
CDE02G2721 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 7.8e-93 345.1 262 69.8
A01p01950 Brassica napus HOM05D005480 ORTHO05D006735 3.9e-92 342.8 283 68.9
BraA01t00184Z Brassica rapa HOM05D005480 ORTHO05D006735 3.9e-92 342.8 283 68.9
ATR0733G143 Amborella trichopoda HOM05D005480 ORTHO05D006735 4.3e-91 339.3 280 66.1
CDE01G0732 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 5.6e-91 339.0 387 57.6
Haze_15193 Corylus avellana HOM05D005480 ORTHO05D006735 1.3e-90 337.8 341 63.9
Lsat_1_v5_gn_4_179460 Lactuca sativa HOM05D005480 ORTHO05D006735 1.1e-89 334.7 396 58.3
unitig_899.g14972 Utricularia gibba HOM05D005480 ORTHO05D006735 1.4e-89 334.3 307 60.9
AUR62001975 Chenopodium quinoa HOM05D005480 ORTHO05D006735 4.0e-89 332.8 345 62.0
Ca_24802_v3 Cicer arietinum L. HOM05D005480 ORTHO05D006735 1.2e-88 331.3 343 63.8
C01p02120 Brassica napus HOM05D005480 ORTHO05D006735 2.0e-88 330.5 281 67.6
BcaNung03510 Brassica carinata HOM05D005480 ORTHO05D006735 7.6e-88 328.6 282 67.7
BolC1t00204H Brassica oleracea HOM05D005480 ORTHO05D006735 2.9e-87 326.6 281 67.6
BolC3t20222H Brassica oleracea HOM05D005480 ORTHO05D006735 1.9e-86 323.9 286 65.7
BcaC01g00434 Brassica carinata HOM05D005480 ORTHO05D006735 3.9e-84 316.2 295 63.4
C03p79710 Brassica napus HOM05D005480 ORTHO05D006735 3.9e-84 316.2 295 63.4
A08p22500 Brassica napus HOM05D005480 ORTHO05D006735 3.1e-81 306.6 366 52.7
BcaB03g12366 Brassica carinata HOM05D005480 ORTHO05D006735 9.0e-81 305.1 397 51.6
BraA08t34205Z Brassica rapa HOM05D005480 ORTHO05D006735 1.2e-80 304.7 364 52.7
arahy.Tifrunner.gnm1.ann1.HXIH5S Arachis hypogaea HOM05D005480 ORTHO05D006735 2.6e-80 303.5 359 58.2
SHI08751 Sapria himalayana HOM05D005480 ORTHO05D006735 1.2e-77 294.7 375 55.5
Os09g0453500 Oryza sativa ssp. japonica HOM05D005480 ORTHO05D006735 3.0e-76 290.0 374 51.9
GSVIVG01005079001 Vitis vinifera HOM05D005480 ORTHO05D006735 3.0e-76 290.0 206 75.7
Lalb_Chr05g0213141 Lupinus albus HOM05D005480 ORTHO05D006735 4.3e-75 286.2 218 70.6
Zm00001eb100530 Zea mays HOM05D005480 ORTHO05D006735 9.6e-75 285.0 278 54.7
Zm00001eb314700 Zea mays HOM05D005480 ORTHO05D006735 9.6e-75 285.0 381 56.2
AagrBONN_evm.TU.Sc2ySwM_117.4106 Anthoceros agrestis HOM05D005480 ORTHO05D006735 9.7e-67 258.5 283 52.7
BcaB03g12364 Brassica carinata HOM05D005480 ORTHO05D006735 2.2e-66 257.3 244 60.7
Ah.03g144040 Amaranthus hybridus HOM05D005480 ORTHO05D006735 1.1e-62 245.0 227 56.8
SEGI_40098 Sequoiadendron giganteum HOM05D005480 ORTHO05D006735 9.4e-62 241.9 214 62.6
SGA_v2.0_scaffold135G34951 Striga asiatica HOM05D005480 ORTHO05D006735 1.1e-59 235.0 381 47.5
Mapoly0027s0041 Marchantia polymorpha HOM05D005480 ORTHO05D006735 2.2e-58 230.7 283 48.8
Pp3c24_6760 Physcomitrium patens HOM05D005480 ORTHO05D006735 2.0e-51 207.6 278 45.0
HPP92_016040 Vanilla planifolia HOM05D005480 ORTHO05D006735 1.6e-45 188.0 173 55.5
Os03g0765400 Oryza sativa ssp. japonica HOM05D005480 ORTHO05D006735 6.1e-45 186.0 364 36.8
CBR_g66690 Chara braunii HOM05D005480 ORTHO05D006735 8.5e-39 165.6 309 39.8
Psat5g148720 Pisum sativum HOM05D005480 ORTHO05D006735 6.1e-37 159.5 198 52.0
Mapoly0016s0112 Marchantia polymorpha HOM05D005480 ORTHO05D006735 7.2e-30 136.0 259 36.3
Cpa.g.c44085 Carica papaya HOM05D005480 ORTHO05D006735 5.2e-28 129.8 181 51.9
Sabra07G0033400 Salix brachista HOM05D005480 ORTHO05D006735 4.4e-27 126.7 82 80.5
HPP92_016039 Vanilla planifolia HOM05D005480 ORTHO05D006735 7.5e-27 125.9 71 87.3
Sabra07G0032900 Salix brachista HOM05D005480 ORTHO05D006735 2.2e-26 124.4 82 79.3
Sabra07G0033100 Salix brachista HOM05D005480 ORTHO05D006735 6.6e-23 112.8 204 50.0
BcaC02g10502 Brassica carinata HOM05D005480 ORTHO05D006735 4.9e-10 70.1 44 77.3
CBR_g66696 Chara braunii HOM05D005480 ORTHO05D006735 3.2e-09 67.4 89 42.7
C04p28170 Brassica napus HOM05D005480 ORTHO05D006735 6.0e-08 63.2 95 48.4
BolC4t24360H Brassica oleracea HOM05D005480 ORTHO05D006735 6.0e-08 63.2 95 48.4
C04p33290 Brassica napus HOM05D005480 ORTHO05D006735 7.8e-08 62.8 58 60.3
Cre16.g685217 Chlamydomonas reinhardtii HOM05D005480 ORTHO05D006735 5.0e-07 60.1 235 25.5


User provided reference genes

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