Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000695g0140 Nicotiana tabacum HOM05D004869 ORTHO05D005893 0.0e+00 1729.1 852 100.0
Nitab4.5_0008670g0020 Nicotiana tabacum HOM05D004869 ORTHO05D005893 0.0e+00 1573.5 812 95.8
Peaxi162Scf00065g01213 Petunia axillaris HOM05D004869 ORTHO05D005893 0.0e+00 1500.0 830 89.3
Sopen01g027900 Solanum pennellii HOM05D004869 ORTHO05D005893 0.0e+00 1496.5 829 88.9
Solyc01g066310.4 Solanum lycopersicum HOM05D004869 ORTHO05D005893 0.0e+00 1482.6 829 88.2
Sopen05g032860 Solanum pennellii HOM05D004869 ORTHO05D005893 0.0e+00 1404.0 830 83.7
Solyc05g054370.2 Solanum lycopersicum HOM05D004869 ORTHO05D005893 0.0e+00 1401.7 830 83.7
PGSC0003DMG400023436 Solanum tuberosum HOM05D004869 ORTHO05D005893 0.0e+00 1399.4 830 83.6
CAN.G449.73 Capsicum annuum HOM05D004869 ORTHO05D005893 0.0e+00 1363.6 830 81.8
Oeu016255.1 Olea europaea HOM05D004869 ORTHO05D005893 0.0e+00 1320.1 836 78.1
Cc03_g01500 Coffea canephora HOM05D004869 ORTHO05D005893 0.0e+00 1300.8 830 77.6
Migut.N00074 Erythranthe guttata HOM05D004869 ORTHO05D005893 0.0e+00 1298.9 828 75.7
Rhsim04G0226400 Rhododendron simsii HOM05D004869 ORTHO05D005893 0.0e+00 1295.4 828 76.0
Dinv44350 Davidia involucrata HOM05D004869 ORTHO05D005893 0.0e+00 1288.1 816 76.5
vmacro08186 Vaccinium macrocarpon HOM05D004869 ORTHO05D005893 0.0e+00 1284.2 850 74.2
Hma1.2p1_1352F.1_g277460 Hydrangea macrophylla HOM05D004869 ORTHO05D005893 0.0e+00 1270.4 831 74.8
Actinidia40299 Actinidia chinensis HOM05D004869 ORTHO05D005893 0.0e+00 1270.0 831 75.7
Cfa015427 Carpinus fangiana HOM05D004869 ORTHO05D005893 0.0e+00 1266.1 834 74.9
QL06p010392 Quercus lobata HOM05D004869 ORTHO05D005893 0.0e+00 1266.1 832 74.5
CiPaw.01G145300 Carya illinoinensis HOM05D004869 ORTHO05D005893 0.0e+00 1261.9 831 75.0
GSVIVG01035107001 Vitis vinifera HOM05D004869 ORTHO05D005893 0.0e+00 1259.2 829 74.8
Prupe.1G131800 Prunus persica HOM05D004869 ORTHO05D005893 0.0e+00 1255.7 818 75.2
Cpa.g.sc50.161 Carica papaya HOM05D004869 ORTHO05D005893 0.0e+00 1247.6 828 73.9
Thecc.04G289100 Theobroma cacao HOM05D004869 ORTHO05D005893 0.0e+00 1247.6 828 73.6
HanXRQChr17g0535991 Helianthus annuus HOM05D004869 ORTHO05D005893 0.0e+00 1246.1 822 73.4
MD16G1164100 Malus domestica HOM05D004869 ORTHO05D005893 0.0e+00 1244.2 815 74.8
MD13G1164300 Malus domestica HOM05D004869 ORTHO05D005893 0.0e+00 1238.4 815 74.5
Atru.chr4.2905 Acer truncatum HOM05D004869 ORTHO05D005893 0.0e+00 1236.9 826 73.2
MELO3C006684.2 Cucumis melo HOM05D004869 ORTHO05D005893 0.0e+00 1234.6 831 72.7
Sabra10G0006600 Salix brachista HOM05D004869 ORTHO05D005893 0.0e+00 1234.6 832 72.8
COL.COLO4_13820 Corchorus olitorius HOM05D004869 ORTHO05D005893 0.0e+00 1233.8 829 73.2
TWI73G0801 Tripterygium wilfordii HOM05D004869 ORTHO05D005893 0.0e+00 1233.4 830 72.8
VMungo1309G2596 Vigna mungo HOM05D004869 ORTHO05D005893 0.0e+00 1232.2 831 73.0
RcHm_v2.0_Chr4g0423401 Rosa chinensis HOM05D004869 ORTHO05D005893 0.0e+00 1231.5 816 72.9
THA.LOC104802695 Tarenaya hassleriana HOM05D004869 ORTHO05D005893 0.0e+00 1229.9 820 73.0
ClCG05G006260 Citrullus lanatus HOM05D004869 ORTHO05D005893 0.0e+00 1228.4 831 72.3
CANSAT78G0178 Cannabis sativa HOM05D004869 ORTHO05D005893 0.0e+00 1227.6 831 72.1
Duzib212G0051 Durio zibethinus HOM05D004869 ORTHO05D005893 0.0e+00 1227.2 828 72.8
Potri.008G219000 Populus trichocarpa HOM05D004869 ORTHO05D005893 0.0e+00 1224.5 825 72.6
Glyma.09G042000 Glycine max HOM05D004869 ORTHO05D005893 0.0e+00 1223.8 831 72.6
Potri.010G010448 Populus trichocarpa HOM05D004869 ORTHO05D005893 0.0e+00 1223.4 826 73.0
Sed0001345 Sechium edule HOM05D004869 ORTHO05D005893 0.0e+00 1223.0 833 71.1
Phvul.009G250700 Phaseolus vulgaris HOM05D004869 ORTHO05D005893 0.0e+00 1222.6 828 72.5
Glyma.15G150900 Glycine max HOM05D004869 ORTHO05D005893 0.0e+00 1221.5 831 72.0
AT3G06810 Arabidopsis thaliana HOM05D004869 ORTHO05D005893 0.0e+00 1220.3 822 71.8
CsaV3_3G014880 Cucumis sativus L. HOM05D004869 ORTHO05D005893 0.0e+00 1219.5 831 71.7
Lj6g0019427 Lotus japonicus HOM05D004869 ORTHO05D005893 0.0e+00 1219.1 820 73.8
FvH4_4g18700 Fragaria vesca HOM05D004869 ORTHO05D005893 0.0e+00 1216.4 816 71.9
TWI53G1493 Tripterygium wilfordii HOM05D004869 ORTHO05D005893 0.0e+00 1216.4 830 72.0
AL3G17930 Arabidopsis lyrata HOM05D004869 ORTHO05D005893 0.0e+00 1216.1 821 71.4
Gorai.005G061800 Gossypium raimondii HOM05D004869 ORTHO05D005893 0.0e+00 1216.1 828 72.0
Lsat_1_v5_gn_3_21560 Lactuca sativa HOM05D004869 ORTHO05D005893 0.0e+00 1216.1 870 69.3
ECA246G3101 Erigeron canadensis HOM05D004869 ORTHO05D005893 0.0e+00 1215.7 831 71.2
Aqoxy5G00789 Aquilegia oxysepala HOM05D004869 ORTHO05D005893 0.0e+00 1214.9 834 72.1
DCAR_027053 Daucus carota HOM05D004869 ORTHO05D005893 0.0e+00 1214.9 809 73.7
Carub.0003s0635 Capsella rubella HOM05D004869 ORTHO05D005893 0.0e+00 1214.5 821 71.3
Lj6A681T39 Lonicera japonica HOM05D004869 ORTHO05D005893 0.0e+00 1213.4 831 72.0
Thhalv10020074m.g Eutrema salsugineum HOM05D004869 ORTHO05D005893 0.0e+00 1211.4 821 71.4
Sc19g0005490 Simmondsia chinensis HOM05D004869 ORTHO05D005893 0.0e+00 1206.8 788 74.6
Gohir.A02G051000 Gossypium hirsutum HOM05D004869 ORTHO05D005893 0.0e+00 1204.1 826 71.2
FAN12G0537 Fragaria x ananassa HOM05D004869 ORTHO05D005893 0.0e+00 1203.7 825 70.8
FAN17G0377 Fragaria x ananassa HOM05D004869 ORTHO05D005893 0.0e+00 1203.7 833 70.2
BraA05t22852Z Brassica rapa HOM05D004869 ORTHO05D005893 0.0e+00 1202.6 820 71.5
Ciclev10004342m.g Citrus clementina HOM05D004869 ORTHO05D005893 0.0e+00 1200.3 822 71.5
A05p41290 Brassica napus HOM05D004869 ORTHO05D005893 0.0e+00 1198.3 820 71.2
Lalb_Chr15g0086081 Lupinus albus HOM05D004869 ORTHO05D005893 0.0e+00 1198.3 830 70.1
C05p60510 Brassica napus HOM05D004869 ORTHO05D005893 0.0e+00 1196.8 819 71.2
CARHR081430 Cardamine hirsuta HOM05D004869 ORTHO05D005893 0.0e+00 1195.6 821 70.4
BolC5t34705H Brassica oleracea HOM05D004869 ORTHO05D005893 0.0e+00 1194.1 819 71.1
FAN12G1313 Fragaria x ananassa HOM05D004869 ORTHO05D005893 0.0e+00 1194.1 855 68.7
arahy.Tifrunner.gnm1.ann1.ZXWI6N Arachis hypogaea HOM05D004869 ORTHO05D005893 0.0e+00 1193.3 832 71.0
Ciclev10004291m.g Citrus clementina HOM05D004869 ORTHO05D005893 0.0e+00 1191.4 829 70.7
Aa31LG5G17400 Aethionema arabicum HOM05D004869 ORTHO05D005893 0.0e+00 1190.6 821 69.8
Gohir.D02G055900 Gossypium hirsutum HOM05D004869 ORTHO05D005893 0.0e+00 1190.6 828 70.9
Hund20507 Selenicereus undatus HOM05D004869 ORTHO05D005893 0.0e+00 1187.9 835 71.0
Sp3g05780 Schrenkiella parvula HOM05D004869 ORTHO05D005893 0.0e+00 1187.2 820 70.2
PSO210G1050 Papaver somniferum HOM05D004869 ORTHO05D005893 0.0e+00 1186.4 829 69.7
SGA_v2.0_scaffold119G32706 Striga asiatica HOM05D004869 ORTHO05D005893 0.0e+00 1186.4 839 70.4
PSO832G2232 Papaver somniferum HOM05D004869 ORTHO05D005893 0.0e+00 1185.6 834 69.7
EL10Ac3g06663 Beta vulgaris HOM05D004869 ORTHO05D005893 0.0e+00 1181.8 838 69.3
Lalb_Chr20g0117401 Lupinus albus HOM05D004869 ORTHO05D005893 0.0e+00 1180.2 831 69.3
Manes.03G198800 Manihot esculenta HOM05D004869 ORTHO05D005893 0.0e+00 1170.2 817 70.6
Ca_01910_v3 Cicer arietinum L. HOM05D004869 ORTHO05D005893 0.0e+00 1169.8 831 69.8
CDE11G0521 Ceratophyllum demersum HOM05D004869 ORTHO05D005893 0.0e+00 1161.4 832 68.6
AUR62018045 Chenopodium quinoa HOM05D004869 ORTHO05D005893 0.0e+00 1161.4 819 69.6
ATR0693G241 Amborella trichopoda HOM05D004869 ORTHO05D005893 0.0e+00 1157.5 827 69.2
AUR62015247 Chenopodium quinoa HOM05D004869 ORTHO05D005893 0.0e+00 1151.0 819 69.0
Nn3g21544 Nelumbo nucifera HOM05D004869 ORTHO05D005893 0.0e+00 1146.0 775 73.3
Os07g0675000 Oryza sativa ssp. japonica HOM05D004869 ORTHO05D005893 0.0e+00 1143.6 830 68.0
Zm00001eb111400 Zea mays HOM05D004869 ORTHO05D005893 0.0e+00 1139.0 840 68.2
HPP92_003120 Vanilla planifolia HOM05D004869 ORTHO05D005893 0.0e+00 1088.9 828 66.3
TAR365G0733 Trochodendron aralioides HOM05D004869 ORTHO05D005893 0.0e+00 1083.6 839 66.3
Ah.04g153720 Amaranthus hybridus HOM05D004869 ORTHO05D005893 0.0e+00 1077.0 838 65.9
Eucgr.B01578 Eucalyptus grandis HOM05D004869 ORTHO05D005893 1.0e-306 1056.6 719 72.0
MBI18_g44774_MAGBIO Magnolia biondii HOM05D004869 ORTHO05D005893 2.3e-303 1045.4 802 65.1
Pp3c18_21710 Physcomitrium patens HOM05D004869 ORTHO05D005893 7.8e-291 1003.8 824 61.2
Haze_01165 Corylus avellana HOM05D004869 ORTHO05D005893 7.3e-289 997.3 835 62.3
Pp3c22_4180 Physcomitrium patens HOM05D004869 ORTHO05D005893 9.6e-289 996.9 828 61.2
SMO202G0033 Selaginella moellendorffii HOM05D004869 ORTHO05D005893 4.8e-280 968.0 825 57.8
arahy.Tifrunner.gnm1.ann1.YH0B1H Arachis hypogaea HOM05D004869 ORTHO05D005893 6.2e-280 967.6 820 62.0
Mapoly0111s0015 Marchantia polymorpha HOM05D004869 ORTHO05D005893 7.4e-273 944.1 817 56.8
SMO169G0300 Selaginella moellendorffii HOM05D004869 ORTHO05D005893 2.2e-245 852.8 839 52.9
AagrBONN_evm.TU.Sc2ySwM_228.2629 Anthoceros agrestis HOM05D004869 ORTHO05D005893 2.1e-243 846.3 708 59.3
CBR_g54445 Chara braunii HOM05D004869 ORTHO05D005893 2.6e-238 829.3 926 49.9
TPR.G26039 Trifolium pratense HOM05D004869 ORTHO05D005893 1.9e-236 823.2 586 68.1
SHI00220 Sapria himalayana HOM05D004869 ORTHO05D005893 1.9e-220 770.0 619 62.4
Medtr2g435800 Medicago truncatula HOM05D004869 ORTHO05D005893 1.3e-216 757.3 568 64.8
DCAR_000477 Daucus carota HOM05D004869 ORTHO05D005893 2.4e-215 753.1 487 74.9
unitig_26.g10563 Utricularia gibba HOM05D004869 ORTHO05D005893 7.0e-215 751.5 489 75.7
CSS0035117 Camellia sinensis var. sinensis HOM05D004869 ORTHO05D005893 2.7e-206 723.0 459 77.1
Psat1g156400 Pisum sativum HOM05D004869 ORTHO05D005893 2.7e-206 723.0 567 62.8
BcaNung06666 Brassica carinata HOM05D004869 ORTHO05D005893 4.5e-206 722.2 485 73.0
Cre16.g675850 Chlamydomonas reinhardtii HOM05D004869 ORTHO05D005893 5.2e-202 708.8 955 43.9
PRCOL_00002960 Prasinoderma coloniale HOM05D004869 ORTHO05D005893 9.6e-172 608.2 801 43.8
Hma1.2p1_0804F.1_g221110 Hydrangea macrophylla HOM05D004869 ORTHO05D005893 2.6e-153 547.0 381 69.6
Oeu031983.1 Olea europaea HOM05D004869 ORTHO05D005893 2.5e-148 530.4 421 62.7
BcaC05g30559 Brassica carinata HOM05D004869 ORTHO05D005893 7.4e-148 528.9 620 48.4
MCO01G041 Micromonas commoda HOM05D004869 ORTHO05D005893 3.9e-133 479.9 427 56.9
MBI18_g37159_MAGBIO Magnolia biondii HOM05D004869 ORTHO05D005893 5.0e-128 463.0 424 59.7
DCAR_023301 Daucus carota HOM05D004869 ORTHO05D005893 1.7e-107 394.8 298 64.8
Cfa024444 Carpinus fangiana HOM05D004869 ORTHO05D005893 7.0e-106 389.4 434 46.3
Cfa022681 Carpinus fangiana HOM05D004869 ORTHO05D005893 3.1e-98 364.0 425 45.2
Medtr2g436030 Medicago truncatula HOM05D004869 ORTHO05D005893 3.2e-95 354.0 223 78.5
QL06p007479 Quercus lobata HOM05D004869 ORTHO05D005893 5.2e-93 346.7 233 73.0
Nn1g04010 Nelumbo nucifera HOM05D004869 ORTHO05D005893 8.9e-85 319.3 190 82.1
Rhsim04G0225600 Rhododendron simsii HOM05D004869 ORTHO05D005893 2.1e-78 298.1 318 52.8
TPR.G13211 Trifolium pratense HOM05D004869 ORTHO05D005893 2.7e-73 281.2 170 84.1
SEGI_30643 Sequoiadendron giganteum HOM05D004869 ORTHO05D005893 2.4e-66 258.1 197 65.5
unitig_26.g10564 Utricularia gibba HOM05D004869 ORTHO05D005893 3.0e-64 251.1 247 54.3
QL93p0200_0027 Quercus lobata HOM05D004869 ORTHO05D005893 1.8e-53 215.3 157 68.8
Rhsim04G0225700 Rhododendron simsii HOM05D004869 ORTHO05D005893 9.6e-47 193.0 133 75.2
MCO01G771 Micromonas commoda HOM05D004869 ORTHO05D005893 1.7e-43 182.2 370 35.1
RcHm_v2.0_Chr3g0480631 Rosa chinensis HOM05D004869 ORTHO05D005893 4.9e-43 180.6 123 69.1
Lsat_1_v5_gn_3_21640 Lactuca sativa HOM05D004869 ORTHO05D005893 2.4e-42 178.3 138 69.6
Rhsim04G0226200 Rhododendron simsii HOM05D004869 ORTHO05D005893 5.1e-40 170.6 150 63.3
RcHm_v2.0_Chr6g0311831 Rosa chinensis HOM05D004869 ORTHO05D005893 3.9e-32 144.4 109 66.1
HanXRQChr01g0024801 Helianthus annuus HOM05D004869 ORTHO05D005893 1.5e-31 142.5 176 44.9
Lsat_1_v5_gn_5_23780 Lactuca sativa HOM05D004869 ORTHO05D005893 1.4e-29 136.0 156 48.1
SEGI_32872 Sequoiadendron giganteum HOM05D004869 ORTHO05D005893 1.8e-29 135.6 89 76.4
SalBow5G3485 Salvia bowleyana HOM05D004869 ORTHO05D005893 1.7e-27 129.0 69 92.8
SEGI_25692 Sequoiadendron giganteum HOM05D004869 ORTHO05D005893 7.9e-25 120.2 103 52.4
MBI18_g46557_MAGBIO Magnolia biondii HOM05D004869 ORTHO05D005893 1.3e-24 119.4 93 64.5
MBI18_g23297_MAGBIO Magnolia biondii HOM05D004869 ORTHO05D005893 2.3e-24 118.6 93 63.4
PGSC0003DMG400027831 Solanum tuberosum HOM05D004869 ORTHO05D005893 8.7e-24 116.7 59 98.3
SMO367G1086 Selaginella moellendorffii HOM05D001528 ORTHO05D006464 1.9e-23 115.5 299 30.4
Haze_26447 Corylus avellana HOM05D001528 ORTHO05D006464 7.4e-23 113.6 413 26.9
BNapus_Darmor_BZH_scaffold_117p00100 Brassica napus HOM05D004869 ORTHO05D005893 1.3e-22 112.8 73 80.8
AagrBONN_evm.TU.Sc2ySwM_117.3343 Anthoceros agrestis HOM05D001528 ORTHO05D006464 5.3e-21 107.5 308 29.5
BolC1t05585H Brassica oleracea HOM05D004869 ORTHO05D005893 6.9e-21 107.1 65 86.2
unitig_747.g22005 Utricularia gibba HOM05D001528 ORTHO05D006464 6.9e-21 107.1 332 27.7
TPR.G15436 Trifolium pratense HOM05D004869 ORTHO05D005893 3.4e-20 104.8 73 68.5
Pp3c3_14940 Physcomitrium patens HOM05D001528 ORTHO05D006464 4.2e-18 97.8 279 29.4
PRCOL_00006365 Prasinoderma coloniale HOM05D001528 ORTHO05D006464 5.5e-18 97.4 331 26.0
PSO339G5049 Papaver somniferum HOM05D001528 ORTHO05D006464 9.4e-18 96.7 319 26.3
PSO384G1162 Papaver somniferum HOM05D001528 ORTHO05D006464 1.6e-17 95.9 319 26.3
PRCOL_00001565 Prasinoderma coloniale HOM05D001528 ORTHO05D006464 2.1e-17 95.5 288 29.2
BcaC09g47921 Brassica carinata HOM05D004869 ORTHO05D005893 1.8e-16 92.4 57 84.2
Mapoly0154s0036 Marchantia polymorpha HOM05D001528 ORTHO05D006464 5.1e-16 90.9 282 28.7
TPR.G25902 Trifolium pratense HOM05D000002 ORTHO05D000001 1.1e-15 89.7 60 70.0
Lsat_1_v5_gn_4_34540 Lactuca sativa HOM05D004869 ORTHO05D005893 2.0e-15 89.0 185 35.1
Medtr0837s0010 Medicago truncatula HOM05D001528 ORTHO05D006464 4.3e-15 87.8 284 26.8
Hma1.2p1_1662F.1_g296280 Hydrangea macrophylla HOM05D004869 ORTHO05D005893 2.0e-12 79.0 53 69.8
Medtr2057s0010 Medicago truncatula HOM05D001528 ORTHO05D265507 1.1e-10 73.2 260 25.0


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