Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000670g0070 Nicotiana tabacum HOM05D004834 ORTHO05D006247 8.8e-44 179.9 89 100.0
PGSC0003DMG403008663 Solanum tuberosum HOM05D004834 ORTHO05D006247 1.3e-31 139.4 75 88.0
Prupe.7G088900 Prunus persica HOM05D004834 ORTHO05D006247 5.0e-31 137.5 114 64.0
Sopen11g020840 Solanum pennellii HOM05D004834 ORTHO05D006247 8.5e-31 136.7 75 86.7
CAN.G409.3 Capsicum annuum HOM05D004834 ORTHO05D006247 1.9e-30 135.6 75 86.7
Nitab4.5_0000117g0030 Nicotiana tabacum HOM05D004834 ORTHO05D006247 3.2e-30 134.8 83 84.3
Migut.J00722 Erythranthe guttata HOM05D004834 ORTHO05D006247 4.2e-30 134.4 75 86.7
THA.LOC104799266 Tarenaya hassleriana HOM05D004834 ORTHO05D006247 1.2e-29 132.9 75 86.7
FAN05G2138 Fragaria x ananassa HOM05D004834 ORTHO05D006247 6.1e-29 130.6 75 82.7
FAN05G4019 Fragaria x ananassa HOM05D004834 ORTHO05D006247 6.1e-29 130.6 75 82.7
SalBow1G1939 Salvia bowleyana HOM05D004834 ORTHO05D006247 6.1e-29 130.6 75 84.0
RcHm_v2.0_Chr3g0477531 Rosa chinensis HOM05D004834 ORTHO05D006247 8.0e-29 130.2 75 82.7
Haze_20096 Corylus avellana HOM05D004834 ORTHO05D006247 1.0e-28 129.8 75 81.3
COL.COLO4_29472 Corchorus olitorius HOM05D004834 ORTHO05D006247 2.3e-28 128.6 75 81.3
Gohir.D09G128200 Gossypium hirsutum HOM05D004834 ORTHO05D006247 2.3e-28 128.6 75 81.3
SGA_v2.0_scaffold112G31558 Striga asiatica HOM05D004834 ORTHO05D006247 2.3e-28 128.6 75 84.0
Cfa020095 Carpinus fangiana HOM05D004834 ORTHO05D006247 3.0e-28 128.3 75 80.0
FAN02G4310 Fragaria x ananassa HOM05D004834 ORTHO05D006247 3.0e-28 128.3 75 81.3
QL07p026067 Quercus lobata HOM05D004834 ORTHO05D006247 3.0e-28 128.3 75 78.7
Hma1.2p1_0304F.1_g119280 Hydrangea macrophylla HOM05D004834 ORTHO05D006247 4.0e-28 127.9 75 81.3
VMungo1383G2386 Vigna mungo HOM05D004834 ORTHO05D006247 4.0e-28 127.9 83 77.1
Cc06_g07030 Coffea canephora HOM05D004834 ORTHO05D006247 5.2e-28 127.5 75 84.0
FvH4_6g21120 Fragaria vesca HOM05D004834 ORTHO05D006247 5.2e-28 127.5 75 81.3
FAN14G4987 Fragaria x ananassa HOM05D004834 ORTHO05D006247 5.2e-28 127.5 75 81.3
Phvul.001G199000 Phaseolus vulgaris HOM05D004834 ORTHO05D006247 5.2e-28 127.5 83 75.9
CiPaw.09G024600 Carya illinoinensis HOM05D004834 ORTHO05D006247 6.7e-28 127.1 75 81.3
Thhalv10013121m.g Eutrema salsugineum HOM05D004834 ORTHO05D006247 6.7e-28 127.1 75 80.0
Gorai.006G146800 Gossypium raimondii HOM05D004834 ORTHO05D006247 6.7e-28 127.1 75 80.0
Potri.016G064800 Populus trichocarpa HOM05D004834 ORTHO05D006247 6.7e-28 127.1 75 80.0
Rhsim03G0058000 Rhododendron simsii HOM05D004834 ORTHO05D006247 6.7e-28 127.1 75 80.0
Sp6g36280 Schrenkiella parvula HOM05D004834 ORTHO05D006247 6.7e-28 127.1 75 80.0
CSS0012663 Camellia sinensis var. sinensis HOM05D004834 ORTHO05D006247 8.8e-28 126.7 75 80.0
Duzib093G1706 Durio zibethinus HOM05D004834 ORTHO05D006247 8.8e-28 126.7 75 80.0
Gohir.A09G131900 Gossypium hirsutum HOM05D004834 ORTHO05D006247 8.8e-28 126.7 75 78.7
Medtr7g107050 Medicago truncatula HOM05D004834 ORTHO05D006247 8.8e-28 126.7 75 80.0
PSO339G5030 Papaver somniferum HOM05D004834 ORTHO05D006247 8.8e-28 126.7 75 80.0
PSO384G0426 Papaver somniferum HOM05D004834 ORTHO05D006247 8.8e-28 126.7 75 80.0
CANSAT64G0017 Cannabis sativa HOM05D004834 ORTHO05D006247 1.2e-27 126.3 75 78.7
ClCG10G017910 Citrullus lanatus HOM05D004834 ORTHO05D006247 1.2e-27 126.3 75 80.0
Glyma.03G205500 Glycine max HOM05D004834 ORTHO05D006247 1.2e-27 126.3 75 78.7
Lj1g0003379 Lotus japonicus HOM05D004834 ORTHO05D006247 1.2e-27 126.3 75 78.7
Oeu063072.1 Olea europaea HOM05D004834 ORTHO05D006247 1.2e-27 126.3 75 81.3
Sed0002421 Sechium edule HOM05D004834 ORTHO05D006247 1.2e-27 126.3 75 78.7
TWI53G0913 Tripterygium wilfordii HOM05D004834 ORTHO05D006247 1.2e-27 126.3 75 80.0
AUR62038413 Chenopodium quinoa HOM05D004834 ORTHO05D006247 1.5e-27 125.9 75 78.7
Manes.09G041400 Manihot esculenta HOM05D004834 ORTHO05D006247 1.5e-27 125.9 75 80.0
Prupe.7G088800 Prunus persica HOM05D004834 ORTHO05D006247 1.5e-27 125.9 75 80.0
vmacro07522 Vaccinium macrocarpon HOM05D004834 ORTHO05D006247 1.5e-27 125.9 75 80.0
AUR62036303 Chenopodium quinoa HOM05D004834 ORTHO05D006247 2.0e-27 125.6 75 77.3
Ca_09087_v3 Cicer arietinum L. HOM05D004834 ORTHO05D006247 2.0e-27 125.6 75 78.7
Lalb_Chr20g0111191 Lupinus albus HOM05D004834 ORTHO05D006247 2.0e-27 125.6 75 78.7
AL6G16670 Arabidopsis lyrata HOM05D004834 ORTHO05D006247 2.6e-27 125.2 75 78.7
AT5G06580 Arabidopsis thaliana HOM05D004834 ORTHO05D006247 2.6e-27 125.2 75 78.7
CSS0029343 Camellia sinensis var. sinensis HOM05D004834 ORTHO05D006247 2.6e-27 125.2 75 78.7
Psat3g026160 Pisum sativum HOM05D004834 ORTHO05D006247 2.6e-27 125.2 75 77.3
TPR.G14418 Trifolium pratense HOM05D004834 ORTHO05D006247 2.6e-27 125.2 75 78.7
vmacro07524 Vaccinium macrocarpon HOM05D004834 ORTHO05D006247 2.6e-27 125.2 75 80.0
MSTRG.19322 Avicennia marina HOM05D004834 ORTHO05D006247 3.3e-27 124.8 75 77.3
Carub.0006s0546 Capsella rubella HOM05D004834 ORTHO05D006247 3.3e-27 124.8 75 78.7
Zm00001eb117230 Zea mays HOM05D004834 ORTHO05D006247 3.3e-27 124.8 75 77.3
CDE07G2068 Ceratophyllum demersum HOM05D004834 ORTHO05D006247 4.4e-27 124.4 75 77.3
TAR633G1355 Trochodendron aralioides HOM05D004834 ORTHO05D006247 4.4e-27 124.4 75 80.0
Atru.chr8.1261 Acer truncatum HOM05D004834 ORTHO05D006247 5.7e-27 124.0 75 78.7
ECA238G0502 Erigeron canadensis HOM05D004834 ORTHO05D006247 5.7e-27 124.0 75 80.0
Aa31sc167G60 Aethionema arabicum HOM05D004834 ORTHO05D006247 7.5e-27 123.6 75 78.7
HanXRQChr14g0453201 Helianthus annuus HOM05D004834 ORTHO05D006247 7.5e-27 123.6 75 80.0
Lsat_1_v5_gn_2_102000 Lactuca sativa HOM05D004834 ORTHO05D006247 7.5e-27 123.6 75 78.7
Rhsim03G0058100 Rhododendron simsii HOM05D004834 ORTHO05D006247 7.5e-27 123.6 75 77.3
Thecc.05G183400 Theobroma cacao HOM05D004834 ORTHO05D006247 7.5e-27 123.6 75 78.7
TAR636G2709 Trochodendron aralioides HOM05D004834 ORTHO05D006247 7.5e-27 123.6 75 78.7
Actinidia03850 Actinidia chinensis HOM05D004834 ORTHO05D006247 9.7e-27 123.2 75 78.7
MD12G1046600 Malus domestica HOM05D004834 ORTHO05D006247 9.7e-27 123.2 75 77.3
Ciclev10011373m.g Citrus clementina HOM05D004834 ORTHO05D006247 1.3e-26 122.9 75 74.7
MELO3C009581.2 Cucumis melo HOM05D004834 ORTHO05D006247 1.3e-26 122.9 75 77.3
DCAR_013465 Daucus carota HOM05D004834 ORTHO05D006247 1.3e-26 122.9 75 78.7
Nn2g14430 Nelumbo nucifera HOM05D004834 ORTHO05D006247 1.7e-26 122.5 75 77.3
arahy.Tifrunner.gnm1.ann1.5D1JVS Arachis hypogaea HOM05D004834 ORTHO05D006247 2.2e-26 122.1 75 77.3
CsaV3_3G038380 Cucumis sativus L. HOM05D004834 ORTHO05D006247 2.2e-26 122.1 75 78.7
Sc01g0005240 Simmondsia chinensis HOM05D004834 ORTHO05D006247 2.2e-26 122.1 75 77.3
Ah.02g115150 Amaranthus hybridus HOM05D004834 ORTHO05D006247 3.7e-26 121.3 75 76.0
A10p29810 Brassica napus HOM05D004834 ORTHO05D006247 3.7e-26 121.3 75 77.3
C09p70190 Brassica napus HOM05D004834 ORTHO05D006247 3.7e-26 121.3 75 77.3
BolC9t59763H Brassica oleracea HOM05D004834 ORTHO05D006247 3.7e-26 121.3 75 77.3
BraA10t45020Z Brassica rapa HOM05D004834 ORTHO05D006247 3.7e-26 121.3 75 77.3
MD12G1046700 Malus domestica HOM05D004834 ORTHO05D006247 3.7e-26 121.3 75 77.3
unitig_26.g9147 Utricularia gibba HOM05D004834 ORTHO05D006247 3.7e-26 121.3 75 77.3
MBI11_g39498_MAGBIO Magnolia biondii HOM05D004834 ORTHO05D006247 6.3e-26 120.6 75 76.0
Hund10783 Selenicereus undatus HOM05D004834 ORTHO05D006247 6.3e-26 120.6 75 73.3
GSVIVG01022507001 Vitis vinifera HOM05D004834 ORTHO05D006247 8.3e-26 120.2 75 76.0
CANSAT64G2176 Cannabis sativa HOM05D004834 ORTHO05D006247 1.1e-25 119.8 75 74.7
HPP92_012150 Vanilla planifolia HOM05D004834 ORTHO05D006247 1.1e-25 119.8 75 76.0
EL10Ac5g11795 Beta vulgaris HOM05D004834 ORTHO05D006247 1.4e-25 119.4 75 74.7
Eucgr.A02536 Eucalyptus grandis HOM05D004834 ORTHO05D006247 1.4e-25 119.4 75 73.3
Aqoxy1G00576 Aquilegia oxysepala HOM05D004834 ORTHO05D006247 1.8e-25 119.0 75 76.0
arahy.Tifrunner.gnm1.ann1.5D1K5R Arachis hypogaea HOM05D004834 ORTHO05D006247 3.1e-25 118.2 75 76.0
ATR0697G015 Amborella trichopoda HOM05D004834 ORTHO05D006247 3.5e-24 114.8 75 69.3
Sabra16G0066600 Salix brachista HOM05D004834 ORTHO05D006247 7.7e-24 113.6 95 62.1
Pp3c24_4090 Physcomitrium patens HOM05D004834 ORTHO05D006247 4.2e-22 107.8 75 66.7
AagrBONN_evm.TU.Sc2ySwM_228.4653 Anthoceros agrestis HOM05D004834 ORTHO05D006247 4.0e-20 101.3 75 62.7
Pp3c20_18170 Physcomitrium patens HOM05D004834 ORTHO05D006247 1.2e-19 99.8 75 64.0
Mapoly0056s0055 Marchantia polymorpha HOM05D004834 ORTHO05D006247 3.1e-17 91.7 75 58.7
CBR_g48275 Chara braunii HOM05D004834 ORTHO05D006247 5.4e-17 90.9 75 56.0
vmacro07525 Vaccinium macrocarpon HOM05D004834 ORTHO05D006247 1.0e-15 86.7 52 82.7
FAN09G1764 Fragaria x ananassa HOM05D004834 ORTHO05D006247 1.5e-11 72.8 43 74.4
Peaxi162Scf00210g00224 Petunia axillaris HOM05D004834 ORTHO05D006247 1.5e-11 72.8 38 86.8
Oeu035654.3 Olea europaea HOM05D004834 ORTHO05D006247 4.9e-10 67.8 43 74.4
QL07p026138 Quercus lobata HOM05D004834 ORTHO05D006247 4.9e-10 67.8 37 81.1
CARHR206620 Cardamine hirsuta HOM05D004834 ORTHO05D006247 7.0e-09 63.9 38 78.9
Cpa.g.sc222.7 Carica papaya HOM05D004834 ORTHO05D006247 7.0e-09 63.9 37 75.7
HanXRQChr13g0396361 Helianthus annuus HOM05D004834 ORTHO05D006247 7.0e-09 63.9 39 76.9
Cre10.g434900 Chlamydomonas reinhardtii HOM05D004834 ORTHO05D006247 9.2e-09 63.5 73 41.1
SEGI_09254 Sequoiadendron giganteum HOM05D004834 ORTHO05D006247 1.6e-08 62.8 38 78.9
Cfa026190 Carpinus fangiana HOM05D004834 ORTHO05D006247 4.5e-08 61.2 74 45.9
HanXRQChr17g0565621 Helianthus annuus HOM05D004834 ORTHO05D006247 5.9e-08 60.8 38 76.3
Cfa024396 Carpinus fangiana HOM05D001072 ORTHO05D006247 7.8e-08 60.5 76 43.4
MD14G1045600 Malus domestica HOM05D004834 ORTHO05D006247 1.0e-07 60.1 38 76.3
SEGI_18704 Sequoiadendron giganteum HOM05D004834 ORTHO05D006247 1.5e-06 56.2 37 64.9


User provided reference genes

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