Gene: Sopen11g020840
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g020840
- Transcript Identifier Sopen11g020840.2
- Gene Type Coding gene
- Location Spenn-ch11 : 47883406-47939628 : positive
Gene Family Information
- ID HOM05D004834
- #Genes/#Species 153/95
- Phylogenetic origin
- ID ORTHO05D006247
- #Genes/#Species 145/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen11g020840.2
Descriptions
- Description Encodes a protein with glycolate dehydrogenase activity, which was shown to complement various subunits of the E. coli glycolate oxidase complex. It has not been ruled out that the enzyme might be involved in other catalytic activities in vivo. | FAD-linked oxidases family protein | FUNCTIONS IN: glycolate oxidase activity, glycolate dehydrogenase activity, D-lactate dehydrogenase (cytochrome) activity, ATP binding | LOCATED IN: mitochondrion | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 , FAD-binding, type 2 , FAD-linked oxidase, C-terminal , FAD-linked oxidase-like, C-terminal , FAD linked oxidase, N-terminal , FAD-binding, type 2, subdomain 1 | BEST Arabidopsis thaliana protein match is: FAD-linked oxidases family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051596 | ISO | PLAZA Integrative Orthology | methylglyoxal catabolic process | AT5G06580 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0050660 | IEA | InterPro | flavin adenine dinucleotide binding | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0003973 | ISO | PLAZA Integrative Orthology | (S)-2-hydroxy-acid oxidase activity | AT5G06580 |
| GO:0004458 | ISO | PLAZA Integrative Orthology | D-lactate dehydrogenase (cytochrome) activity | AT5G06580 |
| GO:0005524 | ISO | PLAZA Integrative Orthology | ATP binding | AT5G06580 |
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT5G06580 |
| GO:0019154 | ISO | PLAZA Integrative Orthology | glycolate dehydrogenase activity | AT5G06580 |
| GO:0008720 | ISO | PLAZA Integrative Orthology | D-lactate dehydrogenase activity | AT5G06580 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G06580 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006094 | FAD linked oxidase, N-terminal |
| IPR016164 | FAD-linked oxidase-like, C-terminal |
| IPR004113 | FAD-linked oxidase, C-terminal |
| IPR036318 | FAD-binding, type PCMH-like superfamily |
| IPR016169 | FAD-binding, type PCMH, subdomain 2 |
| IPR016171 | Vanillyl-alcohol oxidase, C-terminal subdomain 2 |
| Mapman id | Description |
|---|---|
| 2.1.2.4 | Cellular respiration.glycolysis.methylglyoxal degradation.D-lactate dehydrogenase |