Gene: Cfa024396
General Information
Structural Information
- Species Carpinus fangiana
- Gene Identifier Cfa024396
- Transcript Identifier Cfa024396.t1
- Gene Type Coding gene
- Location scaffold17 : 410806-411787 : positive
Gene Family Information
- ID HOM05D001072
- #Genes/#Species 571/100
- Phylogenetic origin
- ID ORTHO05D006247
- #Genes/#Species 145/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Cfa024396.t1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | ISO | PLAZA Homology (enrichment) | translation | HOM05D001072 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0050660 | IEA | InterPro | flavin adenine dinucleotide binding | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0003735 | ISO | PLAZA Homology (enrichment) | structural constituent of ribosome | HOM05D001072 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005840 | ISO | PLAZA Homology (enrichment) | ribosome | HOM05D001072 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036986 | RNA-binding S4 domain superfamily |
| IPR013845 | Ribosomal protein S4e, central region |
| IPR038237 | Ribosomal protein S4e, central domain superfamily |
| IPR041982 | Ribosomal protein S4, KOW domain |
| IPR016169 | FAD-binding, type PCMH, subdomain 2 |
| IPR013843 | Ribosomal protein S4e, N-terminal |
| IPR002942 | RNA-binding S4 domain |
| IPR004113 | FAD-linked oxidase, C-terminal |
| IPR014722 | Ribosomal protein L2, domain 2 |
| IPR036318 | FAD-binding, type PCMH-like superfamily |
| IPR006094 | FAD linked oxidase, N-terminal |
| IPR032277 | 40S ribosomal protein S4, C-terminal domain |
| IPR016171 | Vanillyl-alcohol oxidase, C-terminal subdomain 2 |
| IPR016164 | FAD-linked oxidase-like, C-terminal |
| Mapman id | Description |
|---|---|
| 17.1.3.1.5 | Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS4 |
| 2.1.2.4 | Cellular respiration.glycolysis.methylglyoxal degradation.D-lactate dehydrogenase |