Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000653g0090 Nicotiana tabacum HOM05D006818 ORTHO05D008674 4.1e-195 684.5 336 100.0
Nitab4.5_0000749g0100 Nicotiana tabacum HOM05D006818 ORTHO05D008674 1.5e-176 622.9 312 97.1
Peaxi162Scf01097g00023 Petunia axillaris HOM05D006818 ORTHO05D008674 3.3e-176 621.7 335 90.1
Solyc12g005180.2 Solanum lycopersicum HOM05D006818 ORTHO05D008674 3.0e-169 598.6 336 85.7
Sopen12g001170 Solanum pennellii HOM05D006818 ORTHO05D008674 1.5e-168 596.3 336 85.4
CAN.G315.6 Capsicum annuum HOM05D006818 ORTHO05D008674 4.3e-168 594.7 335 86.0
Dinv22282 Davidia involucrata HOM05D006818 ORTHO05D008674 4.8e-143 511.5 333 75.1
Thecc.07G044200 Theobroma cacao HOM05D006818 ORTHO05D008674 1.1e-142 510.4 313 78.3
Manes.15G074101 Manihot esculenta HOM05D006818 ORTHO05D008674 5.3e-142 508.1 340 73.8
PGSC0003DMG400001099 Solanum tuberosum HOM05D006818 ORTHO05D008674 1.5e-141 506.5 271 89.7
Oeu005459.1 Olea europaea HOM05D006818 ORTHO05D008674 1.9e-139 499.6 317 76.3
QL08p011921 Quercus lobata HOM05D006818 ORTHO05D008674 1.9e-139 499.6 332 74.4
Duzib213G0630 Durio zibethinus HOM05D006818 ORTHO05D008674 2.5e-139 499.2 332 74.7
QL08p012092 Quercus lobata HOM05D006818 ORTHO05D008674 5.5e-139 498.0 331 74.3
COL.COLO4_09629 Corchorus olitorius HOM05D006818 ORTHO05D008674 9.4e-139 497.3 335 74.0
TWI39G0401 Tripterygium wilfordii HOM05D006818 ORTHO05D008674 2.7e-138 495.7 337 72.7
Ciclev10008835m.g Citrus clementina HOM05D006818 ORTHO05D008674 7.9e-138 494.2 339 72.3
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 1.0e-137 493.8 331 74.0
MSTRG.6906 Avicennia marina HOM05D006818 ORTHO05D008674 1.4e-137 493.4 332 73.8
Gohir.A01G077200 Gossypium hirsutum HOM05D006818 ORTHO05D008674 1.8e-137 493.0 336 72.3
CANSAT25G1970 Cannabis sativa HOM05D006818 ORTHO05D008674 6.7e-137 491.1 307 77.2
CSS0009238 Camellia sinensis var. sinensis HOM05D006818 ORTHO05D008674 1.5e-136 490.0 335 72.2
Gohir.D01G064700 Gossypium hirsutum HOM05D006818 ORTHO05D008674 2.6e-136 489.2 336 72.0
GSVIVG01001999001 Vitis vinifera HOM05D006818 ORTHO05D008674 3.3e-136 488.8 316 75.9
Lj8A167T47 Lonicera japonica HOM05D006818 ORTHO05D008674 7.4e-136 487.6 330 73.0
MD11G1222300 Malus domestica HOM05D006818 ORTHO05D008674 1.7e-135 486.5 328 72.0
TAR627G0163 Trochodendron aralioides HOM05D006818 ORTHO05D008674 1.7e-135 486.5 328 74.4
Atru.chr2.3275 Acer truncatum HOM05D006818 ORTHO05D008674 3.7e-135 485.3 322 74.2
Cc05_g13490 Coffea canephora HOM05D006818 ORTHO05D008674 3.7e-135 485.3 328 72.3
Gorai.002G085600 Gossypium raimondii HOM05D006818 ORTHO05D008674 3.7e-135 485.3 336 71.7
CiPaw.11G186900 Carya illinoinensis HOM05D006818 ORTHO05D008674 8.2e-135 484.2 331 71.9
Lalb_Chr04g0248591 Lupinus albus HOM05D006818 ORTHO05D008674 1.1e-134 483.8 332 71.4
Rhsim06G0214800 Rhododendron simsii HOM05D006818 ORTHO05D008674 4.1e-134 481.9 335 71.0
Cpa.g.sc97.37 Carica papaya HOM05D006818 ORTHO05D008674 9.1e-134 480.7 327 71.9
Phvul.008G265400 Phaseolus vulgaris HOM05D006818 ORTHO05D008674 2.0e-133 479.6 332 70.8
VMungo0647G1753 Vigna mungo HOM05D006818 ORTHO05D008674 2.6e-133 479.2 332 71.1
Ah.06g195870 Amaranthus hybridus HOM05D006818 ORTHO05D008674 4.5e-133 478.4 297 77.1
Sc06g0005170 Simmondsia chinensis HOM05D006818 ORTHO05D008674 1.0e-132 477.2 323 71.8
Glyma.14G025600 Glycine max HOM05D006818 ORTHO05D008674 5.0e-132 474.9 331 71.0
Potri.001G420800 Populus trichocarpa HOM05D006818 ORTHO05D008674 6.5e-132 474.6 332 70.8
ClCG05G014460 Citrullus lanatus HOM05D006818 ORTHO05D008674 1.9e-131 473.0 334 70.4
Eucgr.F03445 Eucalyptus grandis HOM05D006818 ORTHO05D008674 1.9e-131 473.0 328 68.6
Prupe.4G208600 Prunus persica HOM05D006818 ORTHO05D008674 3.2e-131 472.2 312 73.1
Migut.M01786 Erythranthe guttata HOM05D006818 ORTHO05D008674 5.5e-131 471.5 329 71.1
MBI18_g06645_MAGBIO Magnolia biondii HOM05D006818 ORTHO05D008674 5.5e-131 471.5 331 73.4
Sed0006226 Sechium edule HOM05D006818 ORTHO05D008674 9.4e-131 470.7 324 71.6
MELO3C018077.2 Cucumis melo HOM05D006818 ORTHO05D008674 6.1e-130 468.0 312 73.4
CsaV3_3G023260 Cucumis sativus L. HOM05D006818 ORTHO05D008674 1.0e-129 467.2 316 72.8
RcHm_v2.0_Chr5g0037981 Rosa chinensis HOM05D006818 ORTHO05D008674 1.0e-129 467.2 328 69.8
Glyma.02G289400 Glycine max HOM05D006818 ORTHO05D008674 2.3e-129 466.1 331 70.7
Ca_06305_v3 Cicer arietinum L. HOM05D006818 ORTHO05D008674 3.9e-129 465.3 327 71.6
Nn1g07100 Nelumbo nucifera HOM05D006818 ORTHO05D008674 3.3e-128 462.2 339 68.4
EL10Ac4g09438 Beta vulgaris HOM05D006818 ORTHO05D008674 7.4e-128 461.1 344 66.0
Sabra16G0285700 Salix brachista HOM05D006818 ORTHO05D008674 7.4e-128 461.1 350 67.4
LjContig00308g0005180 Lotus japonicus HOM05D006818 ORTHO05D008674 4.8e-127 458.4 331 69.2
ECA236G4406 Erigeron canadensis HOM05D006818 ORTHO05D008674 8.2e-127 457.6 327 71.3
Lsat_1_v5_gn_7_109080 Lactuca sativa HOM05D006818 ORTHO05D008674 2.4e-126 456.1 336 68.2
FvH4_3g22121 Fragaria vesca HOM05D006818 ORTHO05D008674 3.1e-126 455.7 331 67.7
Aqoxy1G03627 Aquilegia oxysepala HOM05D006818 ORTHO05D008674 3.5e-125 452.2 332 67.8
PGR031G1507 Punica granatum HOM05D006818 ORTHO05D008674 4.5e-125 451.8 321 68.8
SGA_v2.0_scaffold80G25946 Striga asiatica HOM05D006818 ORTHO05D008674 7.7e-125 451.1 331 68.3
Hund07318 Selenicereus undatus HOM05D006818 ORTHO05D008674 2.2e-124 449.5 328 67.1
Medtr5g092080 Medicago truncatula HOM05D006818 ORTHO05D008674 5.5e-123 444.9 338 66.9
DCAR_022551 Daucus carota HOM05D006818 ORTHO05D008674 6.1e-122 441.4 347 64.0
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 4.0e-121 438.7 293 71.7
Psat2g015280 Pisum sativum HOM05D006818 ORTHO05D008674 4.0e-121 438.7 327 68.2
ATR0752G046 Amborella trichopoda HOM05D006818 ORTHO05D008674 5.2e-121 438.3 273 76.9
A06p27360 Brassica napus HOM05D006818 ORTHO05D008674 6.7e-121 438.0 305 70.2
BraA06t25672Z Brassica rapa HOM05D006818 ORTHO05D008674 6.7e-121 438.0 305 70.2
BcaC01g02294 Brassica carinata HOM05D006818 ORTHO05D008674 8.8e-121 437.6 305 70.2
C03p66930 Brassica napus HOM05D006818 ORTHO05D008674 8.8e-121 437.6 305 70.2
BolC3t18966H Brassica oleracea HOM05D006818 ORTHO05D008674 1.2e-120 437.2 305 70.2
arahy.Tifrunner.gnm1.ann1.37S2BM Arachis hypogaea HOM05D006818 ORTHO05D008674 1.5e-120 436.8 305 71.8
arahy.Tifrunner.gnm1.ann1.D1ZW30 Arachis hypogaea HOM05D006818 ORTHO05D008674 2.0e-120 436.4 305 71.8
HanXRQChr15g0494291 Helianthus annuus HOM05D006818 ORTHO05D008674 7.5e-120 434.5 292 74.7
PSO832G0412 Papaver somniferum HOM05D006818 ORTHO05D008674 9.7e-120 434.1 322 68.3
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 2.8e-119 432.6 284 72.2
CDE01G0156 Ceratophyllum demersum HOM05D006818 ORTHO05D008674 4.8e-119 431.8 314 68.8
QL08p012107 Quercus lobata HOM05D006818 ORTHO05D008674 8.3e-119 431.0 245 82.9
PSO210G7832 Papaver somniferum HOM05D006818 ORTHO05D008674 4.1e-118 428.7 324 67.9
SpUn0103_0020 Schrenkiella parvula HOM05D006818 ORTHO05D008674 5.3e-118 428.3 320 67.8
Carub.0005s1401 Capsella rubella HOM05D006818 ORTHO05D008674 9.1e-118 427.6 305 69.2
unitig_62.g23277 Utricularia gibba HOM05D006818 ORTHO05D008674 1.6e-117 426.8 331 65.9
AL5G27200 Arabidopsis lyrata HOM05D006818 ORTHO05D008674 3.5e-117 425.6 307 68.1
Thhalv10010497m.g Eutrema salsugineum HOM05D006818 ORTHO05D008674 3.5e-117 425.6 305 68.9
BcaB02g10686 Brassica carinata HOM05D006818 ORTHO05D008674 4.5e-117 425.2 306 68.3
Atru.BG.12.p Acer truncatum HOM05D006818 ORTHO05D008674 1.3e-116 423.7 232 87.1
Zm00001eb070100 Zea mays HOM05D006818 ORTHO05D008674 3.8e-116 422.2 292 71.9
Os04g0626400 Oryza sativa ssp. japonica HOM05D006818 ORTHO05D008674 6.5e-116 421.4 291 71.8
AT3G47860 Arabidopsis thaliana HOM05D006818 ORTHO05D008674 4.7e-114 415.2 293 69.3
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 3.4e-112 409.1 270 71.1
Actinidia05109 Actinidia chinensis HOM05D006818 ORTHO05D008674 1.3e-111 407.1 326 63.8
vmacro11742 Vaccinium macrocarpon HOM05D006818 ORTHO05D008674 4.8e-111 405.2 340 62.9
HPP92_009349 Vanilla planifolia HOM05D006818 ORTHO05D008674 7.0e-110 401.4 237 79.3
Aa31LG4G16540 Aethionema arabicum HOM05D006818 ORTHO05D008674 1.2e-109 400.6 285 68.1
AUR62006731 Chenopodium quinoa HOM05D006818 ORTHO05D008674 5.9e-109 398.3 217 85.3
MD03G1208100 Malus domestica HOM05D006818 ORTHO05D008674 4.7e-106 388.7 308 62.3
Sp5g14080 Schrenkiella parvula HOM05D006818 ORTHO05D008674 2.5e-99 366.3 285 66.0
AUR62000376 Chenopodium quinoa HOM05D006818 ORTHO05D008674 3.3e-99 365.9 319 59.6
Mapoly0115s0028 Marchantia polymorpha HOM05D006818 ORTHO05D008674 2.7e-93 346.3 333 54.7
SMO147G0254 Selaginella moellendorffii HOM05D006818 ORTHO05D008674 1.1e-91 340.9 233 67.8
Hma1.2p1_1271F.1_g271840 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 4.3e-91 339.0 183 89.1
Hma1.2p1_1609F.1_g293429 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 4.3e-91 339.0 183 89.1
Pp3c9_6110 Physcomitrium patens HOM05D006818 ORTHO05D008674 5.8e-88 328.6 298 54.4
TPR.G12727 Trifolium pratense HOM05D006818 ORTHO05D008674 3.2e-78 296.2 240 62.9
TPR.G29121 Trifolium pratense HOM05D006818 ORTHO05D008674 1.2e-74 284.3 197 70.6
AagrBONN_evm.TU.Sc2ySwM_228.3024 Anthoceros agrestis HOM05D006818 ORTHO05D008674 2.3e-68 263.5 189 64.0
SEGI_29406 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 1.9e-67 260.4 201 60.7
TPR.G29124 Trifolium pratense HOM05D006818 ORTHO05D008674 6.4e-63 245.4 150 79.3
CBR_g57971 Chara braunii HOM05D006818 ORTHO05D008674 2.4e-57 226.9 201 57.2
PRCOL_00005879 Prasinoderma coloniale HOM05D006818 ORTHO05D008674 1.4e-41 174.5 167 52.1
RcHm_v2.0_Chr3g0496801 Rosa chinensis HOM05D006818 ORTHO05D008674 1.1e-33 148.3 140 52.9
Glyma.14G153300 Glycine max HOM05D006818 ORTHO05D008674 4.5e-32 142.9 78 82.1
Ah.06g195920 Amaranthus hybridus HOM05D001023 ORTHO05D000912 2.6e-24 117.1 102 56.9
Actinidia09914 Actinidia chinensis HOM05D006818 ORTHO05D008674 5.1e-20 102.8 59 81.4
SEGI_26249 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 2.2e-10 70.9 50 66.0
Sed0001393 Sechium edule HOM05D006818 ORTHO05D372820 2.2e-07 60.8 253 27.3
MD02G1010500 Malus domestica HOM05D003204 ORTHO05D003566 3.2e-06 57.0 167 27.5
Mapoly0161s0027 Marchantia polymorpha HOM05D003204 ORTHO05D003566 3.2e-06 57.0 174 28.7
Atru.chr7.159 Acer truncatum HOM05D003204 ORTHO05D003566 7.2e-06 55.8 180 30.6
C02p13650 Brassica napus HOM05D003204 ORTHO05D003566 7.2e-06 55.8 176 28.4
BcaC03g14125 Brassica carinata HOM05D003204 ORTHO05D003566 9.4e-06 55.5 170 28.2
BolC2t07477H Brassica oleracea HOM05D003204 ORTHO05D003566 9.4e-06 55.5 170 28.2


User provided reference genes

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