Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000559g0180 Nicotiana tabacum HOM05D000216 ORTHO05D028337 7.1e-93 344.0 181 100.0
SGA_v2.0_scaffold95G28823 Striga asiatica HOM05D000216 ORTHO05D003638 3.1e-40 169.1 230 48.7
Solyc00g500335.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 9.5e-21 104.4 103 60.2
EL10As12g24015 Beta vulgaris HOM05D000216 ORTHO05D003638 1.6e-20 103.6 103 60.2
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 1.6e-20 103.6 103 60.2
HanXRQChr13g0415501 Helianthus annuus HOM05D000216 ORTHO05D003638 1.6e-20 103.6 103 60.2
Hma1.2p1_0414F.1_g147690 Hydrangea macrophylla HOM05D000216 ORTHO05D003638 1.6e-20 103.6 103 60.2
PSO548G0039 Papaver somniferum HOM05D000216 ORTHO05D003638 1.6e-20 103.6 103 60.2
CAN.G63.18 Capsicum annuum HOM05D000216 ORTHO05D003638 2.1e-20 103.2 102 59.8
ATCG00150 Arabidopsis thaliana HOM05D000216 ORTHO05D003638 2.8e-20 102.8 103 59.2
BNapus_Darmor_BZH_scaffold_253p00040 Brassica napus HOM05D000216 ORTHO05D003638 2.8e-20 102.8 103 59.2
BolSC37t60770H Brassica oleracea HOM05D000216 ORTHO05D003638 2.8e-20 102.8 103 59.2
BolSC45t60878H Brassica oleracea HOM05D000216 ORTHO05D003638 2.8e-20 102.8 103 59.2
BraSC151t45693Z Brassica rapa HOM05D000216 ORTHO05D003638 2.8e-20 102.8 103 59.2
BraSC59t46515Z Brassica rapa HOM05D000216 ORTHO05D003638 2.8e-20 102.8 103 59.2
CAN.G201.5 Capsicum annuum HOM05D000216 ORTHO05D003638 2.8e-20 102.8 103 59.2
CARHR281900 Cardamine hirsuta HOM05D000216 ORTHO05D003638 2.8e-20 102.8 103 59.2
Solyc00g500051.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.8e-20 102.8 171 43.3
Solyc00g500134.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.8e-20 102.8 171 43.3
Solyc00g500204.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.8e-20 102.8 171 43.3
Solyc00g500291.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.8e-20 102.8 171 43.3
Solyc00g500320.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.8e-20 102.8 171 43.3
AUR62012105 Chenopodium quinoa HOM05D000216 ORTHO05D003638 3.6e-20 102.4 103 59.2
Ciclev10013984m.g Citrus clementina HOM05D000216 ORTHO05D003638 3.6e-20 102.4 103 58.3
Lsat_1_v5_gn_2_1641 Lactuca sativa HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Lj2C1237G0 Lonicera japonica HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Lj2C1238G11 Lonicera japonica HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 4.7e-20 102.1 103 59.2
Hund03957 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund18044 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund27559 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund27611 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund27653 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund27865 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund27918 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund27995 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund28152 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund28178 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund28276 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund28388 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund28560 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund28651 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund28794 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund29068 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund29351 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund29741 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund29885 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund30206 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund30310 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund30432 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund30437 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund30852 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund31037 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
Hund31056 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
SEGI_03518 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
SEGI_24812 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
SEGI_31181 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 4.7e-20 102.1 103 59.2
CAN.G386.26 Capsicum annuum HOM05D000216 ORTHO05D003638 6.2e-20 101.7 103 59.2
LjContig00489g0001571 Lotus japonicus HOM05D000216 ORTHO05D003638 6.2e-20 101.7 103 59.2
Potri.013G139080 Populus trichocarpa HOM05D000216 ORTHO05D003638 6.2e-20 101.7 103 58.3
SEGI_01684 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 6.2e-20 101.7 103 58.3
Ah.10g027620 Amaranthus hybridus HOM05D000216 ORTHO05D003638 8.1e-20 101.3 103 59.2
Ah.10g027780 Amaranthus hybridus HOM05D000216 ORTHO05D003638 8.1e-20 101.3 103 59.2
DCAR_032472 Daucus carota HOM05D000216 ORTHO05D003638 8.1e-20 101.3 103 58.3
HanXRQChr00c0165g0572141 Helianthus annuus HOM05D000216 ORTHO05D003638 8.1e-20 101.3 103 59.2
HanXRQChr00c0601g0576511 Helianthus annuus HOM05D000216 ORTHO05D003638 8.1e-20 101.3 103 59.2
HanXRQChr08g0210201 Helianthus annuus HOM05D000216 ORTHO05D003638 8.1e-20 101.3 103 59.2
HanXRQChr10g0282501 Helianthus annuus HOM05D000216 ORTHO05D003638 8.1e-20 101.3 103 59.2
HanXRQChr11g0326631 Helianthus annuus HOM05D000216 ORTHO05D003638 8.1e-20 101.3 103 59.2
HanXRQCPg0579821 Helianthus annuus HOM05D000216 ORTHO05D003638 8.1e-20 101.3 103 59.2
SalBow1G2877 Salvia bowleyana HOM05D000216 ORTHO05D003638 8.1e-20 101.3 103 59.2
Phvul.003G256800 Phaseolus vulgaris HOM05D000216 ORTHO05D003638 1.1e-19 100.9 103 58.3
PGR111G0049 Punica granatum HOM05D000216 ORTHO05D003638 1.4e-19 100.5 103 58.3
QL93p0837_0003 Quercus lobata HOM05D000216 ORTHO05D003638 1.4e-19 100.5 103 58.3
arahy.Tifrunner.gnm1.ann1.49E3RC Arachis hypogaea HOM05D000216 ORTHO05D003638 2.3e-19 99.8 103 58.3
arahy.Tifrunner.gnm1.ann1.77R9Y6 Arachis hypogaea HOM05D000216 ORTHO05D003638 2.3e-19 99.8 103 58.3
arahy.Tifrunner.gnm1.ann1.KPH33C Arachis hypogaea HOM05D000216 ORTHO05D003638 2.3e-19 99.8 103 58.3
RcHm_v2.0_CPg0502431 Rosa chinensis HOM05D000216 ORTHO05D003638 2.3e-19 99.8 103 58.3
Sed0006587 Sechium edule HOM05D000216 ORTHO05D003638 2.3e-19 99.8 103 58.3
Sed0012920 Sechium edule HOM05D000216 ORTHO05D003638 2.3e-19 99.8 103 58.3
Sed0015108 Sechium edule HOM05D000216 ORTHO05D003638 2.3e-19 99.8 103 58.3
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 2.3e-19 99.8 103 58.3
Lsat_1_v5_gn_8_19261 Lactuca sativa HOM05D000216 ORTHO05D003638 3.1e-19 99.4 103 58.3
Medtr0002s0530 Medicago truncatula HOM05D000216 ORTHO05D003638 3.1e-19 99.4 103 57.3
Zm00001eb435250 Zea mays HOM05D000216 ORTHO05D003638 3.1e-19 99.4 103 57.3
Zm00001eb435460 Zea mays HOM05D000216 ORTHO05D003638 3.1e-19 99.4 103 57.3
Zm00001eb435730 Zea mays HOM05D000216 ORTHO05D003638 3.1e-19 99.4 103 57.3
Zm00001eb436810 Zea mays HOM05D000216 ORTHO05D003638 3.1e-19 99.4 103 57.3
Zm00001eb437240 Zea mays HOM05D000216 ORTHO05D003638 3.1e-19 99.4 103 57.3
Zm00001eb438330 Zea mays HOM05D000216 ORTHO05D003638 3.1e-19 99.4 103 57.3
Zm00001eb441010 Zea mays HOM05D000216 ORTHO05D003638 3.1e-19 99.4 103 57.3
Zm00001eb442740 Zea mays HOM05D000216 ORTHO05D003638 3.1e-19 99.4 103 57.3
LjContig00318g0018562 Lotus japonicus HOM05D000216 ORTHO05D003638 4.0e-19 99.0 103 57.3
Medtr3g029550 Medicago truncatula HOM05D000216 ORTHO05D003638 4.0e-19 99.0 103 57.3
Medtr4g051103 Medicago truncatula HOM05D000216 ORTHO05D003638 4.0e-19 99.0 103 57.3
Psat0s2754g0240 Pisum sativum HOM05D000216 ORTHO05D003638 4.0e-19 99.0 103 57.3
Psat0s2961g0080 Pisum sativum HOM05D000216 ORTHO05D003638 4.0e-19 99.0 103 57.3
Psat0s3650g0160 Pisum sativum HOM05D000216 ORTHO05D003638 4.0e-19 99.0 103 57.3
Psat1g003880 Pisum sativum HOM05D000216 ORTHO05D003638 4.0e-19 99.0 103 57.3
Psat6g219400 Pisum sativum HOM05D000216 ORTHO05D003638 4.0e-19 99.0 103 57.3
Psat7g033680 Pisum sativum HOM05D000216 ORTHO05D003638 4.0e-19 99.0 103 57.3
Lalb_Chr09g0335341 Lupinus albus HOM05D000216 ORTHO05D003638 1.2e-18 97.4 129 49.6
SEGI_00749 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.5e-18 97.1 103 57.3
unitig_91.g26494 Utricularia gibba HOM05D000216 ORTHO05D003638 1.5e-18 97.1 103 57.3
Gorai.013G017800 Gossypium raimondii HOM05D000216 ORTHO05D003638 4.4e-18 95.5 108 53.7
Mapoly0044s0072 Marchantia polymorpha HOM05D000216 ORTHO05D003638 7.5e-18 94.7 103 55.3
Lalb_Chr07g0192171 Lupinus albus HOM05D000216 ORTHO05D003638 9.9e-18 94.4 103 56.3
Ah.10g028520 Amaranthus hybridus HOM05D000216 ORTHO05D003638 1.3e-17 94.0 103 56.3
Medtr7g116680 Medicago truncatula HOM05D000216 ORTHO05D003638 1.7e-17 93.6 82 63.4
Oeu028759.1 Olea europaea HOM05D000216 ORTHO05D003638 2.9e-17 92.8 103 53.4
Hund20346 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.7e-17 92.4 102 53.9
Gohir.D02G093150 Gossypium hirsutum HOM05D000216 ORTHO05D003638 6.4e-17 91.7 101 55.4
Sed0025462 Sechium edule HOM05D000216 ORTHO05D003638 6.4e-17 91.7 103 54.4
Gorai.005G105500 Gossypium raimondii HOM05D000216 ORTHO05D003638 1.1e-16 90.9 101 55.4
CDE02G3154 Ceratophyllum demersum HOM05D000216 ORTHO05D003638 3.5e-15 85.9 96 56.2
Medtr0140s0070 Medicago truncatula HOM05D000216 ORTHO05D003638 3.5e-15 85.9 116 48.3
HanXRQChr00c0560g0575801 Helianthus annuus HOM05D000216 ORTHO05D003638 1.3e-14 84.0 154 40.3
CAN.G229.14 Capsicum annuum HOM05D000216 ORTHO05D003638 2.3e-14 83.2 94 55.3
Lalb_Chr06g0172971 Lupinus albus HOM05D000216 ORTHO05D003638 3.9e-14 82.4 93 54.8
CSS0018496 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D003638 5.1e-14 82.0 98 54.1
Psat7g038960 Pisum sativum HOM05D000216 ORTHO05D003638 6.6e-14 81.6 110 50.0
Medtr6g025470 Medicago truncatula HOM05D000216 ORTHO05D003638 1.1e-13 80.9 110 55.5
Migut.L00411 Erythranthe guttata HOM05D000216 ORTHO05D003638 3.3e-13 79.3 93 54.8
Psat0s1586g0120 Pisum sativum HOM05D000216 ORTHO05D003638 2.8e-12 76.3 98 50.0
Psat5g134680 Pisum sativum HOM05D000216 ORTHO05D003638 6.2e-12 75.1 141 41.8
CAN.G517.19 Capsicum annuum HOM05D000216 ORTHO05D003638 1.1e-11 74.3 91 51.6
Lsat_1_v5_gn_3_17360 Lactuca sativa HOM05D000216 ORTHO05D003638 1.4e-11 73.9 92 48.9
Lalb_Chr06g0173061 Lupinus albus HOM05D000216 ORTHO05D003638 1.4e-11 73.9 94 50.0
Hund15942 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.4e-11 73.2 85 51.8
Gorai.006G017100 Gossypium raimondii HOM05D000216 ORTHO05D003638 1.5e-10 70.5 90 47.8
Lsat_1_v5_gn_3_44020 Lactuca sativa HOM05D000216 ORTHO05D003638 2.0e-10 70.1 40 82.5
Gohir.D02G023550 Gossypium hirsutum HOM05D000216 ORTHO05D003638 1.3e-09 67.4 90 47.8
Gorai.005G029600 Gossypium raimondii HOM05D000216 ORTHO05D003638 1.3e-09 67.4 90 47.8
BolSC37t60759H Brassica oleracea HOM05D229673 ORTHO05D028337 1.7e-09 67.0 52 63.5
Hund01856 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.7e-09 67.0 195 32.8
Solyc10g044560.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 1.7e-09 67.0 65 60.0
Nitab4.5_0001639g0020 Nicotiana tabacum HOM05D000216 ORTHO05D003638 3.8e-09 65.9 188 34.0
TPR.G8664 Trifolium pratense HOM05D000216 ORTHO05D003638 3.8e-09 65.9 101 42.6
Gohir.D09G014950 Gossypium hirsutum HOM05D000216 ORTHO05D003638 6.4e-09 65.1 90 45.6
Gorai.006G159100 Gossypium raimondii HOM05D000216 ORTHO05D003638 6.4e-09 65.1 86 47.7
arahy.Tifrunner.gnm1.ann1.M78D68 Arachis hypogaea HOM05D000216 ORTHO05D003638 1.1e-08 64.3 94 46.8
Psat0s2288g0040 Pisum sativum HOM05D000216 ORTHO05D003638 1.1e-08 64.3 87 48.3
Migut.D01339 Erythranthe guttata HOM05D000216 ORTHO05D003638 1.9e-08 63.5 34 91.2
Medtr5g022790 Medicago truncatula HOM05D001076 ORTHO05D001603 1.9e-08 63.5 34 91.2
Nn4g23650 Nelumbo nucifera HOM05D000216 ORTHO05D003638 1.9e-08 63.5 34 91.2
TPR.G8651 Trifolium pratense HOM05D000216 ORTHO05D003638 2.4e-08 63.2 99 42.4
MD16G1263300 Malus domestica HOM05D000216 ORTHO05D003638 1.2e-07 60.8 35 85.7
Oeu022568.1 Olea europaea HOM05D000216 ORTHO05D003638 1.2e-07 60.8 35 85.7
Potri.019G028601 Populus trichocarpa HOM05D000216 ORTHO05D003638 1.2e-07 60.8 34 85.3
Hund01860 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.2e-07 60.8 189 32.8
SEGI_26801 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.2e-07 60.8 35 85.7
Gohir.D08G103720 Gossypium hirsutum HOM05D000216 ORTHO05D003518 2.1e-07 60.1 35 82.9
HanXRQChr12g0380621 Helianthus annuus HOM05D000216 ORTHO05D003638 2.1e-07 60.1 35 85.7
HanXRQChr13g0425721 Helianthus annuus HOM05D000216 ORTHO05D003638 2.1e-07 60.1 35 85.7
HanXRQChr13g0425811 Helianthus annuus HOM05D000216 ORTHO05D003638 2.1e-07 60.1 35 85.7
arahy.Tifrunner.gnm1.ann1.3KQL5I Arachis hypogaea HOM05D000216 ORTHO05D003518 4.6e-07 58.9 80 48.8
Oeu045559.1 Olea europaea HOM05D000216 ORTHO05D003518 4.6e-07 58.9 34 82.4
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 6.0e-07 58.5 35 82.9
Solyc08g028875.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 6.0e-07 58.5 34 85.3
arahy.Tifrunner.gnm1.ann1.TG7LSU Arachis hypogaea HOM05D000216 ORTHO05D003638 1.0e-06 57.8 35 80.0
CAN.G1185.18 Capsicum annuum HOM05D000216 ORTHO05D003638 1.3e-06 57.4 35 80.0
Nitab4.5_0002175g0020 Nicotiana tabacum HOM05D000216 ORTHO05D003638 1.7e-06 57.0 35 82.9
Oeu024824.1 Olea europaea HOM05D000216 ORTHO05D003518 1.7e-06 57.0 34 79.4
Gorai.012G024800 Gossypium raimondii HOM05D000216 ORTHO05D003638 2.3e-06 56.6 29 93.1
Lsat_1_v5_gn_4_50801 Lactuca sativa HOM05D000216 ORTHO05D010816 2.3e-06 56.6 58 51.7
MD16G1100100 Malus domestica HOM05D000216 ORTHO05D003638 2.3e-06 56.6 35 82.9
Gohir.D04G020733 Gossypium hirsutum HOM05D000216 ORTHO05D003638 3.0e-06 56.2 31 87.1
CAN.G993.7 Capsicum annuum HOM05D000216 ORTHO05D003638 3.9e-06 55.8 35 80.0
Glyma.19G054201 Glycine max HOM05D000216 ORTHO05D003638 3.9e-06 55.8 31 87.1
TPR.G20776 Trifolium pratense HOM05D000216 ORTHO05D003638 3.9e-06 55.8 34 79.4


User provided reference genes

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