Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000459g0130 Nicotiana tabacum HOM05D011511 ORTHO05D000022 2.2e-102 375.6 179 100.0
Nitab4.5_0005029g0020 Nicotiana tabacum HOM05D011511 ORTHO05D000022 5.0e-22 108.6 131 40.5
PGSC0003DMG400029986 Solanum tuberosum HOM05D011511 ORTHO05D000022 5.2e-19 98.6 131 40.5
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 3.7e-17 92.4 129 37.2
Sopen11g024980 Solanum pennellii HOM05D011511 ORTHO05D000022 3.7e-17 92.4 131 38.9
Sopen00g012040 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-16 90.5 129 37.2
Sopen09g016340 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-16 90.5 143 35.7
PGSC0003DMG400035850 Solanum tuberosum HOM05D000003 ORTHO05D000022 2.4e-16 89.7 132 34.8
PGSC0003DMG400045895 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.7e-15 86.3 130 34.6
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 3.5e-15 85.9 131 36.6
PGSC0003DMG400046872 Solanum tuberosum HOM05D000003 ORTHO05D000022 4.5e-15 85.5 132 34.8
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 7.7e-15 84.7 133 37.6
Nitab4.5_0010722g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.7e-14 83.6 132 34.1
Sopen00g003380 Solanum pennellii HOM05D000155 ORTHO05D000022 1.7e-14 83.6 129 34.1
Sopen00g003540 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-14 83.6 129 34.1
Sopen09g012310 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-14 83.6 150 31.3
CAN.G1135.5 Capsicum annuum HOM05D011511 ORTHO05D000022 1.1e-13 80.9 120 33.3
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 1.5e-13 80.5 124 36.3
PGSC0003DMG400040103 Solanum tuberosum HOM05D000003 ORTHO05D000022 1.5e-13 80.5 123 35.8
Sopen04g014310 Solanum pennellii HOM05D000155 ORTHO05D000022 1.9e-13 80.1 129 32.6
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 1.9e-13 80.1 142 31.7
Nitab4.5_0000512g0090 Nicotiana tabacum HOM05D011511 ORTHO05D000022 4.2e-13 79.0 117 38.5
Sopen08g015180 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-12 77.4 122 34.4
Sopen08g015240 Solanum pennellii HOM05D000003 ORTHO05D000004 2.1e-12 76.6 132 30.3
Sopen06g007150 Solanum pennellii HOM05D000003 ORTHO05D000004 2.7e-12 76.3 122 35.2
Nitab4.5_0006480g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.6e-12 75.9 89 40.4
Thecc.03G325600 Theobroma cacao HOM05D000003 ORTHO05D000006 8.8e-11 71.2 121 31.4
Cc00_g21050 Coffea canephora HOM05D000155 ORTHO05D000022 1.2e-10 70.9 131 32.1
PGSC0003DMG401032256 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.0e-10 70.1 132 29.5
Cc00_g20180 Coffea canephora HOM05D000155 ORTHO05D000022 4.4e-10 68.9 131 29.8
Sopen09g015050 Solanum pennellii HOM05D000003 ORTHO05D000004 5.7e-10 68.6 114 35.1
Cc00_g24940 Coffea canephora HOM05D000155 ORTHO05D000022 1.3e-09 67.4 121 33.1
Cc06_g22510 Coffea canephora HOM05D000155 ORTHO05D000022 1.3e-09 67.4 121 33.1
Nitab4.5_0001007g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.3e-09 67.4 45 73.3
PGSC0003DMG400021434 Solanum tuberosum HOM05D001426 ORTHO05D000022 2.8e-09 66.2 131 29.0
Thecc.04G000200 Theobroma cacao HOM05D000155 ORTHO05D000022 2.8e-09 66.2 119 31.1
PGSC0003DMG400015911 Solanum tuberosum HOM05D000003 ORTHO05D001389 1.1e-08 64.3 136 27.9
Nitab4.5_0000335g0260 Nicotiana tabacum HOM05D000003 ORTHO05D000004 1.4e-08 63.9 114 28.9
Peaxi162Scf53938g00004 Petunia axillaris HOM05D001426 ORTHO05D001389 9.1e-08 61.2 129 31.8
Thecc.02G366600 Theobroma cacao HOM05D000003 ORTHO05D000006 1.2e-07 60.8 119 28.6
Sopen04g007290 Solanum pennellii HOM05D000003 ORTHO05D000006 2.0e-07 60.1 91 31.9
Cc03_g15170 Coffea canephora HOM05D000025 ORTHO05D000022 4.5e-07 58.9 131 30.5
Cc11_g02100 Coffea canephora HOM05D000003 ORTHO05D000022 1.0e-06 57.8 132 25.8
Nitab4.5_0000251g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.0e-06 57.8 139 30.2
Sopen07g021380 Solanum pennellii HOM05D000155 ORTHO05D000034 1.0e-06 57.8 65 44.6
CAN.G2076.4 Capsicum annuum HOM05D000295 ORTHO05D006296 1.7e-06 57.0 112 30.4
MBI05_g23299_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.7e-06 57.0 132 28.8
Sopen12g016250 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-06 57.0 126 28.6
MBI03_g41276_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.9e-06 56.2 125 31.2
MBI16_g05639_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.9e-06 56.2 135 28.1
MBI14_g00926_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.6e-06 55.1 127 29.9
MBI18_g33703_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.6e-06 55.1 133 34.6
PGSC0003DMG400012502 Solanum tuberosum HOM05D000003 ORTHO05D000004 6.6e-06 55.1 125 29.6
Atru.chr1.776 Acer truncatum HOM05D000003 ORTHO05D000004 8.6e-06 54.7 137 32.8
MBI01_g27612_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.6e-06 54.7 132 28.0
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 8.6e-06 54.7 121 34.7
RcHm_v2.0_Chr4g0406871 Rosa chinensis HOM05D000003 ORTHO05D000004 8.6e-06 54.7 144 32.6
PGSC0003DMG400023605 Solanum tuberosum HOM05D000003 ORTHO05D000004 8.6e-06 54.7 125 30.4


User provided reference genes

Program Settings