Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000451g0190 Nicotiana tabacum HOM05D001987 ORTHO05D006514 8.8e-30 132.9 64 100.0
Peaxi162Scf01098g00013 Petunia axillaris HOM05D001987 ORTHO05D006514 6.4e-20 100.1 63 74.6
Sc17g0003730 Simmondsia chinensis HOM05D001987 ORTHO05D006514 3.2e-19 97.8 51 90.2
Solyc00g500100.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 3.2e-19 97.8 51 90.2
Solyc00g500117.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 3.2e-19 97.8 51 90.2
Solyc00g500245.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 3.2e-19 97.8 51 90.2
Solyc00g500274.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 3.2e-19 97.8 51 90.2
Sopen00g002770 Solanum pennellii HOM05D004291 ORTHO05D005620 3.2e-19 97.8 51 90.2
Ca_30750_v3 Cicer arietinum L. HOM05D001987 ORTHO05D006514 9.2e-19 96.3 51 88.2
ATMG00080 Arabidopsis thaliana HOM05D001987 ORTHO05D004018 2.0e-18 95.1 51 86.3
BolSC28t60316H Brassica oleracea HOM05D001987 ORTHO05D004018 2.0e-18 95.1 51 86.3
BraSC48t46331Z Brassica rapa HOM05D001987 ORTHO05D004018 2.0e-18 95.1 51 86.3
Thhalv10001268m.g Eutrema salsugineum HOM05D001987 ORTHO05D004018 2.0e-18 95.1 51 86.3
Dinv06676 Davidia involucrata HOM05D001987 ORTHO05D006514 2.7e-18 94.7 51 88.2
LjContig00315g0000313 Lotus japonicus HOM05D001987 ORTHO05D006514 2.7e-18 94.7 51 86.3
Lalb_Chr00c21g0405751 Lupinus albus HOM05D001987 ORTHO05D006514 2.7e-18 94.7 51 86.3
Lalb_Chr00c24g0407071 Lupinus albus HOM05D001987 ORTHO05D006514 2.7e-18 94.7 51 86.3
Psat1g091000 Pisum sativum HOM05D001987 ORTHO05D006514 2.7e-18 94.7 51 86.3
Psat7g012480 Pisum sativum HOM05D001987 ORTHO05D006514 2.7e-18 94.7 51 86.3
SalBow1G3504 Salvia bowleyana HOM05D001987 ORTHO05D006514 2.7e-18 94.7 51 88.2
SalBow1G4210 Salvia bowleyana HOM05D001987 ORTHO05D006514 2.7e-18 94.7 51 88.2
Solyc00g500309.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 4.6e-18 94.0 51 88.2
Actinidia34925 Actinidia chinensis HOM05D001987 ORTHO05D006514 7.8e-18 93.2 51 86.3
arahy.Tifrunner.gnm1.ann1.D5EGR1 Arachis hypogaea HOM05D001987 ORTHO05D006514 7.8e-18 93.2 51 84.3
Lalb_Chr11g0070101 Lupinus albus HOM05D001987 ORTHO05D006514 7.8e-18 93.2 51 84.3
AL5G20250 Arabidopsis lyrata HOM05D001987 ORTHO05D016577 1.0e-17 92.8 51 84.3
Cfa023008 Carpinus fangiana HOM05D001987 ORTHO05D006514 1.3e-17 92.4 51 86.3
Aa31csc822G30 Aethionema arabicum HOM05D001987 ORTHO05D006514 1.7e-17 92.0 51 84.3
DCAR_032447 Daucus carota HOM05D001987 ORTHO05D006514 1.7e-17 92.0 51 84.3
Gorai.001G161500 Gossypium raimondii HOM05D001987 ORTHO05D006514 1.7e-17 92.0 51 84.3
Nitab4.5_0009561g0030 Nicotiana tabacum HOM05D001987 ORTHO05D004018 3.0e-17 91.3 51 84.3
RhsimMtG0002600 Rhododendron simsii HOM05D001987 ORTHO05D006514 3.9e-17 90.9 51 84.3
Solyc09g015860.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 3.9e-17 90.9 51 84.3
MBI05_g05348_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 1.1e-16 89.4 63 68.3
Lsat_1_v5_gn_0_38040 Lactuca sativa HOM05D001987 ORTHO05D006514 3.3e-16 87.8 51 82.4
Sopen05g027050 Solanum pennellii HOM05D001987 ORTHO05D004018 4.3e-16 87.4 51 84.3
CDE02G0251 Ceratophyllum demersum HOM05D001987 ORTHO05D006514 5.6e-16 87.0 51 82.4
HanXRQChr01g0013341 Helianthus annuus HOM05D001987 ORTHO05D004018 5.6e-16 87.0 51 80.4
HanXRQChr01g0013351 Helianthus annuus HOM05D001987 ORTHO05D004018 5.6e-16 87.0 51 80.4
HanXRQChr16g0504311 Helianthus annuus HOM05D001987 ORTHO05D006514 5.6e-16 87.0 51 80.4
HanXRQMTg0579601 Helianthus annuus HOM05D001987 ORTHO05D006514 5.6e-16 87.0 51 80.4
Solyc03g063770.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 5.6e-16 87.0 49 87.8
PGSC0003DMG400030936 Solanum tuberosum HOM05D001987 ORTHO05D004018 5.6e-16 87.0 51 80.4
TAR358G0001 Trochodendron aralioides HOM05D001987 ORTHO05D006514 7.3e-16 86.7 51 82.4
Lsat_1_v5_gn_8_132861 Lactuca sativa HOM05D001987 ORTHO05D006514 9.5e-16 86.3 51 80.4
Nitab4.5_0002616g0170 Nicotiana tabacum HOM05D001987 ORTHO05D006514 1.6e-15 85.5 46 89.1
Peaxi162Scf00934g00143 Petunia axillaris HOM05D001987 ORTHO05D006514 3.6e-15 84.3 50 82.0
HanXRQChr05g0147721 Helianthus annuus HOM05D001987 ORTHO05D006514 6.2e-15 83.6 51 78.4
CsaV3_UNG208600 Cucumis sativus L. HOM05D001987 ORTHO05D006514 1.0e-14 82.8 45 84.4
SGA_v2.0_scaffold339G49282 Striga asiatica HOM05D001987 ORTHO05D006514 1.0e-14 82.8 50 80.0
Nitab4.5_0007876g0050 Nicotiana tabacum HOM05D001987 ORTHO05D006514 1.8e-14 82.0 53 75.5
SabraMtG0007200 Salix brachista HOM05D001987 ORTHO05D004018 1.8e-14 82.0 45 84.4
Solyc12g038985.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 6.8e-14 80.1 51 78.4
ClCG08G009700 Citrullus lanatus HOM05D001987 ORTHO05D004018 2.0e-13 78.6 45 82.2
Solyc05g045920.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 5.8e-13 77.0 50 74.0
Nitab4.5_0000309g0180 Nicotiana tabacum HOM05D001987 ORTHO05D005620 7.5e-13 76.6 51 72.5
ClCG08G015640 Citrullus lanatus HOM05D001987 ORTHO05D006514 1.7e-09 65.5 41 75.6
Gohir.A13G113500 Gossypium hirsutum HOM05D001987 ORTHO05D006514 1.7e-09 65.5 33 84.8
Hund27846 Selenicereus undatus HOM05D001987 ORTHO05D004018 1.1e-08 62.8 37 83.8
SEGI_40200 Sequoiadendron giganteum HOM05D001987 ORTHO05D006514 1.1e-08 62.8 46 63.0
SGA_v2.0_scaffold255G45472 Striga asiatica HOM05D001987 ORTHO05D006514 1.1e-08 62.8 36 83.3
Solyc05g045780.1 Solanum lycopersicum HOM05D001987 ORTHO05D004018 2.5e-08 61.6 51 60.8
Hund30965 Selenicereus undatus HOM05D001987 ORTHO05D006514 3.3e-08 61.2 40 80.0
Hund31335 Selenicereus undatus HOM05D001987 ORTHO05D004018 7.3e-08 60.1 35 85.7
Hund12658 Selenicereus undatus HOM05D001987 ORTHO05D006514 2.8e-07 58.2 40 75.0
SHI29633 Sapria himalayana HOM05D001987 ORTHO05D006514 4.7e-07 57.4 38 73.7
Pp3c2_23477 Physcomitrium patens HOM05D001987 ORTHO05D004018 1.4e-06 55.8 43 62.8
SHI20096 Sapria himalayana HOM05D001987 ORTHO05D006514 1.8e-06 55.5 38 71.1


User provided reference genes

Program Settings