Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000379g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 1.4e-281 972.2 488 100.0
Nitab4.5_0000367g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 3.1e-276 954.5 488 97.7
Solyc05g015310.3 Solanum lycopersicum HOM05D005856 ORTHO05D007264 1.5e-249 865.9 490 90.0
Sopen05g010580 Solanum pennellii HOM05D005856 ORTHO05D007264 2.3e-247 858.6 490 89.4
CAN.G43.18 Capsicum annuum HOM05D005856 ORTHO05D007264 9.8e-246 853.2 490 88.6
PGSC0003DMG400015053 Solanum tuberosum HOM05D005856 ORTHO05D007264 9.5e-241 836.6 490 87.3
Peaxi162Scf00128g01130 Petunia axillaris HOM05D005856 ORTHO05D007264 9.2e-228 793.5 486 84.2
CSS0025471 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 4.4e-198 694.9 506 71.5
CSS0003803 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 9.3e-196 687.2 545 67.5
Eucgr.H04651 Eucalyptus grandis HOM05D005856 ORTHO05D007264 1.2e-195 686.8 497 72.2
Actinidia20701 Actinidia chinensis HOM05D005856 ORTHO05D007264 1.1e-193 680.2 499 72.3
Manes.13G018400 Manihot esculenta HOM05D005856 ORTHO05D007264 9.6e-193 677.2 508 70.5
PGR119G1218 Punica granatum HOM05D005856 ORTHO05D007264 9.6e-193 677.2 493 70.4
Oeu036879.1 Olea europaea HOM05D005856 ORTHO05D007264 2.1e-192 676.0 495 71.7
CsaV3_6G032280 Cucumis sativus L. HOM05D005856 ORTHO05D007264 8.4e-189 664.1 511 68.5
COL.COLO4_20381 Corchorus olitorius HOM05D005856 ORTHO05D007264 2.4e-188 662.5 497 69.6
SalBow1G2377 Salvia bowleyana HOM05D005856 ORTHO05D007264 2.4e-188 662.5 498 69.3
MELO3C011452.2 Cucumis melo HOM05D005856 ORTHO05D007264 1.6e-187 659.8 511 68.7
QL03p053723 Quercus lobata HOM05D005856 ORTHO05D007264 1.6e-187 659.8 441 75.1
ClCG08G010110 Citrullus lanatus HOM05D005856 ORTHO05D007264 2.7e-187 659.1 509 68.0
Rhsim12G0099000 Rhododendron simsii HOM05D005856 ORTHO05D007264 6.0e-187 657.9 492 69.1
Duzib248G0543 Durio zibethinus HOM05D005856 ORTHO05D007264 3.9e-186 655.2 497 68.0
Sed0007662 Sechium edule HOM05D005856 ORTHO05D007264 1.1e-185 653.7 508 67.9
Prupe.1G228400 Prunus persica HOM05D005856 ORTHO05D007264 8.1e-184 647.5 506 68.8
arahy.Tifrunner.gnm1.ann1.E9QWSH Arachis hypogaea HOM05D005856 ORTHO05D007264 3.1e-183 645.6 447 73.8
Thecc.02G210800 Theobroma cacao HOM05D005856 ORTHO05D007264 2.0e-182 642.9 501 67.9
MD13G1117100 Malus domestica HOM05D005856 ORTHO05D007264 5.8e-182 641.3 464 72.2
ECA233G1277 Erigeron canadensis HOM05D005856 ORTHO05D007264 2.9e-181 639.0 504 67.3
CANSAT01G0688 Cannabis sativa HOM05D005856 ORTHO05D007264 3.8e-181 638.6 447 73.8
Potri.006G025300 Populus trichocarpa HOM05D005856 ORTHO05D007264 8.4e-181 637.5 490 68.0
Glyma.18G007700 Glycine max HOM05D005856 ORTHO05D007264 2.5e-180 636.0 489 69.7
Gohir.A04G139000 Gossypium hirsutum HOM05D005856 ORTHO05D007264 4.2e-180 635.2 497 67.6
Ciclev10031347m.g Citrus clementina HOM05D005856 ORTHO05D007264 1.2e-179 633.6 493 67.1
Psat5g095080 Pisum sativum HOM05D005856 ORTHO05D007264 1.2e-179 633.6 490 67.1
arahy.Tifrunner.gnm1.ann1.ID6EX5 Arachis hypogaea HOM05D005856 ORTHO05D007264 3.5e-179 632.1 447 72.5
Cfa009330 Carpinus fangiana HOM05D005856 ORTHO05D007264 7.9e-179 630.9 487 69.2
Medtr3g085550 Medicago truncatula HOM05D005856 ORTHO05D007264 7.9e-179 630.9 487 66.9
Atru.chr11.2307 Acer truncatum HOM05D005856 ORTHO05D007264 2.3e-178 629.4 496 66.1
Sc04g0010050 Simmondsia chinensis HOM05D005856 ORTHO05D007264 3.0e-178 629.0 501 65.9
Gorai.012G175300 Gossypium raimondii HOM05D005856 ORTHO05D007264 6.7e-178 627.9 511 65.6
SGA_v2.0_scaffold135G34936 Striga asiatica HOM05D005856 ORTHO05D007264 6.7e-178 627.9 498 66.9
Lj3A1066G66 Lonicera japonica HOM05D005856 ORTHO05D007264 1.5e-177 626.7 410 75.9
Glyma.11G249500 Glycine max HOM05D005856 ORTHO05D007264 7.4e-177 624.4 485 68.0
Lj3g0022861 Lotus japonicus HOM05D005856 ORTHO05D007264 1.3e-176 623.6 493 66.3
Lalb_Chr11g0075741 Lupinus albus HOM05D005856 ORTHO05D007264 1.3e-176 623.6 507 65.9
THA.LOC104807593 Tarenaya hassleriana HOM05D005856 ORTHO05D007264 8.2e-176 620.9 511 66.5
TPR.G28278 Trifolium pratense HOM05D005856 ORTHO05D007264 1.8e-175 619.8 491 66.6
TAR622G1129 Trochodendron aralioides HOM05D005856 ORTHO05D007264 3.1e-175 619.0 465 70.3
DCAR_031194 Daucus carota HOM05D005856 ORTHO05D007264 1.5e-174 616.7 458 69.4
Haze_12395 Corylus avellana HOM05D005856 ORTHO05D007264 4.5e-174 615.1 477 68.3
Aa31sc1092G20 Aethionema arabicum HOM05D005856 ORTHO05D007264 5.0e-173 611.7 471 68.4
Hund06082 Selenicereus undatus HOM05D005856 ORTHO05D007264 6.5e-173 611.3 509 65.2
AL2G26010 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 8.4e-173 610.9 472 68.0
BcaB03g15198 Brassica carinata HOM05D005856 ORTHO05D007264 1.1e-172 610.5 469 66.7
AT1G67440 Arabidopsis thaliana HOM05D005856 ORTHO05D007264 2.5e-172 609.4 469 67.4
Sabra06G0018600 Salix brachista HOM05D005856 ORTHO05D007264 2.5e-172 609.4 507 64.3
CiPaw.05G111700 Carya illinoinensis HOM05D005856 ORTHO05D007264 3.2e-172 609.0 401 77.1
FAN07G1943 Fragaria x ananassa HOM05D005856 ORTHO05D007264 3.2e-172 609.0 451 71.0
Lsat_1_v5_gn_8_149340 Lactuca sativa HOM05D005856 ORTHO05D007264 3.2e-172 609.0 496 65.9
BcaC08g46160 Brassica carinata HOM05D005856 ORTHO05D007264 3.5e-171 605.5 469 65.9
EL10Ac6g13483 Beta vulgaris HOM05D005856 ORTHO05D007264 7.9e-171 604.4 416 73.1
CARHR059980 Cardamine hirsuta HOM05D005856 ORTHO05D007264 1.0e-170 604.0 471 66.0
FvH4_4g23940 Fragaria vesca HOM05D005856 ORTHO05D007264 1.0e-170 604.0 490 67.1
FAN22G0691 Fragaria x ananassa HOM05D005856 ORTHO05D007264 1.3e-170 603.6 451 70.1
Carub.0002s1377 Capsella rubella HOM05D005856 ORTHO05D007264 1.8e-170 603.2 475 66.1
Aqoxy5G03410 Aquilegia oxysepala HOM05D005856 ORTHO05D007264 3.0e-170 602.4 459 68.0
TWI36G0309 Tripterygium wilfordii HOM05D005856 ORTHO05D007264 3.9e-170 602.1 506 63.6
FAN17G0012 Fragaria x ananassa HOM05D005856 ORTHO05D007264 5.1e-170 601.7 451 69.8
BraA07t31027Z Brassica rapa HOM05D005856 ORTHO05D007264 1.5e-169 600.1 469 65.7
VMungo1383G1560 Vigna mungo HOM05D005856 ORTHO05D007264 1.9e-169 599.7 488 65.6
A07p34000 Brassica napus HOM05D005856 ORTHO05D007264 3.3e-169 599.0 503 63.0
Phvul.001G260800 Phaseolus vulgaris HOM05D005856 ORTHO05D007264 3.3e-169 599.0 489 65.6
Potri.016G023500 Populus trichocarpa HOM05D005856 ORTHO05D007264 4.3e-169 598.6 443 69.8
unitig_88.g27631 Utricularia gibba HOM05D005856 ORTHO05D007264 9.7e-169 597.4 517 62.1
Sp5g22410 Schrenkiella parvula HOM05D005856 ORTHO05D007264 1.3e-168 597.0 443 68.8
Thhalv10019531m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 2.2e-168 596.3 439 69.7
Cpa.g.sc351.3 Carica papaya HOM05D005856 ORTHO05D007264 1.3e-165 587.0 466 67.0
HanXRQChr08g0207721 Helianthus annuus HOM05D005856 ORTHO05D007264 8.5e-165 584.3 470 65.3
RcHm_v2.0_Chr4g0430601 Rosa chinensis HOM05D005856 ORTHO05D007264 8.5e-165 584.3 438 69.9
GSVIVG01010446001 Vitis vinifera HOM05D005856 ORTHO05D007264 1.4e-162 577.0 402 74.1
Nn4g22353 Nelumbo nucifera HOM05D005856 ORTHO05D007264 8.8e-162 574.3 441 68.9
PSO782G2456 Papaver somniferum HOM05D005856 ORTHO05D007264 3.3e-161 572.4 449 64.6
Migut.H00051 Erythranthe guttata HOM05D005856 ORTHO05D007264 2.8e-160 569.3 494 61.9
AUR62005603 Chenopodium quinoa HOM05D005856 ORTHO05D007264 8.2e-160 567.8 550 59.1
C06p42840 Brassica napus HOM05D005856 ORTHO05D007264 5.5e-156 555.1 469 61.8
BolC6t39153H Brassica oleracea HOM05D005856 ORTHO05D007264 3.6e-155 552.4 469 61.4
CDE05G3252 Ceratophyllum demersum HOM05D005856 ORTHO05D007264 4.1e-151 538.9 429 65.7
AUR62024126 Chenopodium quinoa HOM05D005856 ORTHO05D007264 9.1e-151 537.7 415 68.0
Dinv14826 Davidia involucrata HOM05D005856 ORTHO05D007264 2.6e-150 536.2 376 74.5
ATR0561G073 Amborella trichopoda HOM05D005856 ORTHO05D007264 3.8e-149 532.3 425 63.5
Manes.12G012850 Manihot esculenta HOM05D005856 ORTHO05D007264 3.3e-145 519.2 410 66.1
Gohir.D04G181900 Gossypium hirsutum HOM05D005856 ORTHO05D007264 5.5e-140 501.9 497 57.9
Os04g0381600 Oryza sativa ssp. japonica HOM05D005856 ORTHO05D007264 5.2e-138 495.4 394 64.0
Sp5g22430 Schrenkiella parvula HOM05D005856 ORTHO05D007264 1.4e-135 487.3 463 56.6
AL2G26030 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 1.8e-135 486.9 448 57.6
Cc11_g00900 Coffea canephora HOM05D005856 ORTHO05D007264 9.1e-135 484.6 307 77.5
SEGI_12163 Sequoiadendron giganteum HOM05D005856 ORTHO05D007264 4.5e-134 482.3 368 65.5
PSO063G1304 Papaver somniferum HOM05D005856 ORTHO05D007264 7.7e-134 481.5 449 57.7
HPP92_024239 Vanilla planifolia HOM05D005856 ORTHO05D007264 6.1e-131 471.9 439 57.9
Ca_16469_v3 Cicer arietinum L. HOM05D005856 ORTHO05D007264 3.1e-127 459.5 366 66.1
Zm00001eb420890 Zea mays HOM05D005856 ORTHO05D007264 1.5e-121 440.7 378 61.6
Thhalv10019423m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 5.0e-117 425.6 341 62.2
Pp3c14_19540 Physcomitrium patens HOM05D005856 ORTHO05D007264 1.7e-112 410.6 435 50.8
HPP92_013615 Vanilla planifolia HOM05D005856 ORTHO05D007264 2.2e-112 410.2 368 58.7
Mapoly0076s0016 Marchantia polymorpha HOM05D005856 ORTHO05D007264 3.3e-108 396.4 497 45.9
AagrBONN_evm.TU.Sc2ySwM_344.2476 Anthoceros agrestis HOM05D005856 ORTHO05D007264 1.5e-105 387.5 460 49.8
SMO236G0063 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 1.3e-104 384.4 381 53.8
CARHR068030 Cardamine hirsuta HOM05D005856 ORTHO05D007264 2.9e-104 383.3 441 50.1
Actinidia26816 Actinidia chinensis HOM05D005856 ORTHO05D007264 3.5e-102 376.3 272 70.2
FAN12G0203 Fragaria x ananassa HOM05D005856 ORTHO05D007264 2.8e-99 366.7 250 73.2
CBR_g49528 Chara braunii HOM05D005856 ORTHO05D007264 2.9e-96 356.7 390 49.0
Ah.03g136240 Amaranthus hybridus HOM05D005856 ORTHO05D007264 3.8e-96 356.3 359 59.1
Carub.0002s1379 Capsella rubella HOM05D005856 ORTHO05D007264 1.1e-87 328.2 346 51.7
AUR62005602 Chenopodium quinoa HOM05D005856 ORTHO05D007264 2.8e-83 313.5 332 53.6
MCO13G068 Micromonas commoda HOM05D005856 ORTHO05D007264 8.4e-72 275.4 337 46.6
AT1G67460 Arabidopsis thaliana HOM05D005856 ORTHO05D007264 1.4e-71 274.6 254 57.5
PRCOL_00004669 Prasinoderma coloniale HOM05D005856 ORTHO05D007264 1.5e-65 254.6 411 38.0
ECA240G4225 Erigeron canadensis HOM05D005856 ORTHO05D007264 2.9e-64 250.4 309 47.6
Cre10.g436600 Chlamydomonas reinhardtii HOM05D005856 ORTHO05D007264 2.2e-56 224.2 446 33.0
MD07G1133300 Malus domestica HOM05D005856 ORTHO05D007264 4.5e-33 146.7 123 65.0
Cfa005743 Carpinus fangiana HOM05D005856 ORTHO05D007264 2.2e-32 144.4 134 59.7
Haze_12396 Corylus avellana HOM05D005856 ORTHO05D007264 2.2e-32 144.4 122 61.5
Medtr3g085580 Medicago truncatula HOM05D005856 ORTHO05D007264 1.2e-30 138.7 189 45.5
SMO199G0052 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 4.1e-26 123.6 178 41.6
Cc02_g32220 Coffea canephora HOM05D005856 ORTHO05D007264 7.0e-26 122.9 129 58.1
Dinv17562 Davidia involucrata HOM05D005856 ORTHO05D015634 1.9e-23 114.8 63 79.4
SMO199G0068 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 1.7e-19 101.7 206 35.0
VMungo0464G1347 Vigna mungo HOM05D005856 ORTHO05D007264 1.6e-17 95.1 134 48.5
AL2G26330 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 3.5e-17 94.0 67 64.2
SMO199G0090 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 3.2e-15 87.4 88 51.1
Migut.O00545 Erythranthe guttata HOM05D005856 ORTHO05D007264 9.5e-15 85.9 157 43.3
SMO361G0803 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 2.1e-14 84.7 96 44.8
SalBow4G2969 Salvia bowleyana HOM05D005856 ORTHO05D015634 6.3e-11 73.2 62 56.5
Rhsim10G0039300 Rhododendron simsii HOM05D005856 ORTHO05D007264 2.4e-10 71.2 62 66.1
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 7.8e-09 66.2 293 24.9
Psat5g095160 Pisum sativum HOM05D001167 ORTHO05D036681 1.9e-07 61.6 73 47.9


User provided reference genes

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