Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 7.6e-231 803.5 420 100.0
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 7.2e-197 690.6 455 82.0
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 1.0e-187 660.2 454 78.4
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 4.5e-183 644.8 472 74.4
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 1.1e-176 623.6 439 77.2
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 7.3e-173 610.9 433 76.7
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 2.8e-116 422.9 476 52.3
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 9.3e-112 407.9 460 50.7
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 1.5e-109 400.6 450 52.4
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 8.2e-108 394.8 443 52.1
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 2.0e-106 390.2 441 49.0
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 3.2e-104 382.9 445 49.7
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 2.6e-98 363.2 420 50.5
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 1.7e-97 360.5 446 48.0
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 5.5e-96 355.5 462 45.7
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 1.2e-95 354.4 458 46.3
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 1.6e-95 354.0 438 46.1
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 2.3e-94 350.1 446 46.6
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 5.2e-94 349.0 450 46.9
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 1.5e-93 347.4 443 46.3
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 3.3e-93 346.3 441 46.5
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 5.7e-93 345.5 451 46.1
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 1.2e-90 337.8 455 44.8
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 1.6e-90 337.4 443 47.2
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 6.5e-89 332.0 449 44.3
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 2.1e-87 327.0 445 44.9
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 1.8e-86 323.9 437 44.6
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 1.7e-84 317.4 442 43.2
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 1.4e-83 314.3 444 43.9
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 9.1e-83 311.6 449 44.5
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 2.0e-82 310.5 446 42.4
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 5.9e-82 308.9 441 41.7
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 7.7e-82 308.5 464 42.0
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 1.0e-81 308.1 440 41.4
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 1.3e-81 307.8 445 43.4
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 1.3e-81 307.8 446 42.2
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 1.9e-80 303.9 446 43.0
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 2.5e-80 303.5 440 41.8
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 7.2e-80 302.0 441 41.7
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.6e-79 300.8 432 42.6
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 2.7e-79 300.1 440 41.6
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 1.4e-78 297.7 435 42.8
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 1.4e-78 297.7 441 42.4
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 5.2e-78 295.8 346 48.8
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 8.8e-78 295.0 437 41.2
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 1.2e-77 294.7 343 47.5
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 1.5e-77 294.3 447 42.1
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.5e-77 294.3 441 42.0
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 5.7e-77 292.4 418 42.1
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 5.7e-77 292.4 449 41.6
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 9.8e-77 291.6 450 41.3
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.7e-76 290.8 432 41.9
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 6.3e-76 288.9 434 39.9
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 6.3e-76 288.9 431 41.5
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 8.3e-76 288.5 444 40.5
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 1.4e-75 287.7 442 40.3
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 5.4e-75 285.8 431 41.8
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 7.0e-75 285.4 431 39.7
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 1.6e-74 284.3 454 42.3
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 2.7e-74 283.5 430 40.5
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 1.0e-73 281.6 431 39.9
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 1.0e-73 281.6 432 40.5
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 1.3e-73 281.2 431 39.9
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 1.7e-73 280.8 431 41.1
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 1.7e-73 280.8 450 41.6
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 2.9e-73 280.0 435 40.5
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 2.9e-73 280.0 439 39.0
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 1.1e-72 278.1 426 41.5
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 1.5e-72 277.7 431 39.4
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 1.5e-72 277.7 439 40.5
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 7.2e-72 275.4 445 39.1
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 3.6e-71 273.1 438 39.3
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 8.0e-71 271.9 456 39.0
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 1.0e-70 271.6 443 39.1
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 6.8e-70 268.9 442 39.8
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 8.9e-70 268.5 418 39.5
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 1.5e-69 267.7 440 38.6
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 2.6e-69 266.9 445 39.3
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 1.3e-68 264.6 421 39.7
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 1.7e-68 264.2 448 37.9
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 2.4e-67 260.4 437 39.4
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 1.2e-66 258.1 416 39.7
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 7.8e-66 255.4 428 39.5
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 1.0e-65 255.0 345 44.9
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 1.7e-65 254.2 440 37.3
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 6.6e-65 252.3 446 37.2
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 1.5e-64 251.1 417 39.8
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 6.1e-63 245.7 433 37.9
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 1.4e-62 244.6 413 38.7
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 6.8e-62 242.3 435 38.4
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 2.6e-61 240.4 344 42.7
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 2.3e-57 227.3 281 47.7
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 2.5e-56 223.8 335 40.9
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 2.1e-55 220.7 444 35.6
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 2.3e-54 217.2 307 42.0
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 2.5e-48 197.2 410 34.6
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 7.3e-48 195.7 185 55.7
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 8.9e-46 188.7 305 42.0
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 3.6e-39 166.8 327 37.6
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 1.2e-31 141.7 142 48.6
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 2.0e-29 134.4 143 48.3
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.7e-28 131.3 143 47.6
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.7e-28 131.3 143 47.6
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 4.6e-26 123.2 197 41.1
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 7.8e-26 122.5 347 29.7
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.6e-23 114.8 118 49.2
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 5.8e-21 106.3 127 45.7
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.4e-19 101.7 164 34.1
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.4e-19 101.7 164 34.1
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 5.4e-19 99.8 210 33.8
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 1.6e-15 88.2 78 55.1
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 5.5e-11 73.2 95 41.1
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 3.9e-09 67.0 55 54.5
SEGI_26564 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 5.6e-08 63.2 113 33.6
arahy.Tifrunner.gnm1.ann1.SUI2IU Arachis hypogaea HOM05D006143 ORTHO05D007587 1.3e-07 62.0 51 58.8
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 3.7e-07 60.5 464 22.0
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 6.2e-07 59.7 94 38.3
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 1.4e-06 58.5 47 61.7
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 3.1e-06 57.4 215 27.9


User provided reference genes

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