Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000372g0030 Nicotiana tabacum HOM05D001959 ORTHO05D001955 2.1e-191 672.2 337 100.0
Nitab4.5_0000533g0030 Nicotiana tabacum HOM05D001959 ORTHO05D001955 1.2e-61 241.1 556 34.2
Peaxi162Scf00389g00212 Petunia axillaris HOM05D001959 ORTHO05D001955 3.3e-59 233.0 557 33.2
Nitab4.5_0003258g0010 Nicotiana tabacum HOM05D001959 ORTHO05D001955 1.1e-57 228.0 598 32.1
Nitab4.5_0000022g0320 Nicotiana tabacum HOM05D001959 ORTHO05D001955 1.3e-55 221.1 598 31.9
Sopen11g030240 Solanum pennellii HOM05D001959 ORTHO05D001955 1.3e-55 221.1 557 33.2
Solyc11g072590.3 Solanum lycopersicum HOM05D001959 ORTHO05D001955 6.5e-55 218.8 557 33.0
PGSC0003DMG400030059 Solanum tuberosum HOM05D001959 ORTHO05D001955 1.3e-52 211.1 578 31.8
CAN.G84.35 Capsicum annuum HOM05D001959 ORTHO05D001955 1.6e-50 204.1 566 30.9
CAN.G200.3 Capsicum annuum HOM05D001959 ORTHO05D001955 2.0e-48 197.2 579 30.9
Sopen06g001180 Solanum pennellii HOM05D001959 ORTHO05D001955 3.4e-48 196.4 578 31.1
Nitab4.5_0000888g0050 Nicotiana tabacum HOM05D001959 ORTHO05D001955 7.4e-43 178.7 432 34.0
Duzib168G1585 Durio zibethinus HOM05D001959 ORTHO05D001955 2.8e-34 150.2 595 26.1
TAR636G0263 Trochodendron aralioides HOM05D001959 ORTHO05D001955 2.4e-33 147.1 293 37.2
Dinv06354 Davidia involucrata HOM05D001959 ORTHO05D001955 4.1e-33 146.4 276 39.5
Thecc.09G336200 Theobroma cacao HOM05D001959 ORTHO05D001955 1.2e-32 144.8 597 26.3
Ca_19232_v3 Cicer arietinum L. HOM05D001959 ORTHO05D001955 5.9e-32 142.5 266 38.0
Glyma.11G150034 Glycine max HOM05D001959 ORTHO05D001955 1.3e-31 141.4 266 38.0
Cc01_g11820 Coffea canephora HOM05D001959 ORTHO05D001955 2.2e-31 140.6 263 39.2
Glyma.12G073200 Glycine max HOM05D001959 ORTHO05D001955 2.9e-31 140.2 266 38.0
Atru.chr3.3737 Acer truncatum HOM05D001959 ORTHO05D001955 5.0e-31 139.4 592 26.0
arahy.Tifrunner.gnm1.ann1.XKSF6X Arachis hypogaea HOM05D001959 ORTHO05D001955 1.9e-30 137.5 266 37.2
Lalb_Chr03g0027031 Lupinus albus HOM05D001959 ORTHO05D001955 3.2e-30 136.7 266 37.2
TAR633G1817 Trochodendron aralioides HOM05D001959 ORTHO05D001955 3.2e-30 136.7 258 38.0
Lj3g0005960 Lotus japonicus HOM05D001959 ORTHO05D001955 5.5e-30 136.0 266 39.5
CSS0003965 Camellia sinensis var. sinensis HOM05D001959 ORTHO05D001955 7.2e-30 135.6 299 36.1
Phvul.011G071200 Phaseolus vulgaris HOM05D001959 ORTHO05D001955 9.4e-30 135.2 266 36.8
TPR.G2975 Trifolium pratense HOM05D001959 ORTHO05D001955 9.4e-30 135.2 267 37.5
VMungo1127G1737 Vigna mungo HOM05D001959 ORTHO05D001955 1.6e-29 134.4 266 36.5
Ciclev10027731m.g Citrus clementina HOM05D001959 ORTHO05D001955 2.1e-29 134.0 265 38.1
Psat7g221920 Pisum sativum HOM05D001959 ORTHO05D001955 4.7e-29 132.9 267 37.1
Lalb_Chr19g0137531 Lupinus albus HOM05D001959 ORTHO05D001955 1.0e-28 131.7 264 37.1
GSVIVG01025102001 Vitis vinifera HOM05D001959 ORTHO05D001955 1.0e-28 131.7 284 36.3
COL.COLO4_18383 Corchorus olitorius HOM05D001959 ORTHO05D001955 1.4e-28 131.3 276 36.2
arahy.Tifrunner.gnm1.ann1.L7TZBM Arachis hypogaea HOM05D001959 ORTHO05D001955 3.0e-28 130.2 286 34.6
Haze_23952 Corylus avellana HOM05D001959 ORTHO05D001955 3.0e-28 130.2 268 36.2
Nn2g10631 Nelumbo nucifera HOM05D001959 ORTHO05D001955 3.0e-28 130.2 282 35.5
Gohir.D07G097900 Gossypium hirsutum HOM05D001959 ORTHO05D001955 3.9e-28 129.8 334 33.8
Gohir.A07G093300 Gossypium hirsutum HOM05D001959 ORTHO05D001955 6.7e-28 129.0 295 35.6
Actinidia00815 Actinidia chinensis HOM05D001959 ORTHO05D001955 8.8e-28 128.6 276 35.9
Lj3g0016662 Lotus japonicus HOM05D001959 ORTHO05D001955 2.0e-27 127.5 252 37.3
Lalb_Chr01g0004061 Lupinus albus HOM05D001959 ORTHO05D001955 2.0e-27 127.5 264 36.4
Gorai.001G105300 Gossypium raimondii HOM05D001959 ORTHO05D001955 2.6e-27 127.1 334 32.9
Medtr4g061180 Medicago truncatula HOM05D001959 ORTHO05D001955 4.4e-27 126.3 266 36.8
Eucgr.J02120 Eucalyptus grandis HOM05D001959 ORTHO05D001955 5.7e-27 125.9 256 37.5
Gohir.D08G008800 Gossypium hirsutum HOM05D001959 ORTHO05D001955 5.7e-27 125.9 259 36.3
EL10Ac9g22397 Beta vulgaris HOM05D001959 ORTHO05D001955 7.4e-27 125.6 255 35.7
Ca_01445_v3 Cicer arietinum L. HOM05D001959 ORTHO05D001955 9.7e-27 125.2 261 35.2
Gohir.A13G229800 Gossypium hirsutum HOM05D001959 ORTHO05D001955 9.7e-27 125.2 597 25.5
FAN16G2581 Fragaria x ananassa HOM05D001959 ORTHO05D001955 1.3e-26 124.8 267 35.6
Phvul.L000154 Phaseolus vulgaris HOM05D001959 ORTHO05D001955 1.3e-26 124.8 266 36.5
Nn2g12973 Nelumbo nucifera HOM05D001959 ORTHO05D001955 2.2e-26 124.0 254 34.6
FAN25G2198 Fragaria x ananassa HOM05D001959 ORTHO05D001955 3.7e-26 123.2 267 35.6
Duzib170G1143 Durio zibethinus HOM05D001959 ORTHO05D001955 4.8e-26 122.9 596 24.3
Medtr2g093100 Medicago truncatula HOM05D001959 ORTHO05D001955 4.8e-26 122.9 263 35.4
Oeu058500.1 Olea europaea HOM05D001959 ORTHO05D001955 4.8e-26 122.9 565 25.1
MD03G1108000 Malus domestica HOM05D001959 ORTHO05D001955 8.2e-26 122.1 267 35.2
MD11G1121300 Malus domestica HOM05D001959 ORTHO05D001955 8.2e-26 122.1 267 35.6
Gohir.D13G235300 Gossypium hirsutum HOM05D001959 ORTHO05D001955 1.1e-25 121.7 603 24.5
Cpa.g.sc139.44 Carica papaya HOM05D001959 ORTHO05D001955 1.8e-25 120.9 266 34.6
RcHm_v2.0_Chr5g0061481 Rosa chinensis HOM05D001959 ORTHO05D001955 1.8e-25 120.9 272 35.7
TPR.G11610 Trifolium pratense HOM05D001959 ORTHO05D001955 1.8e-25 120.9 263 36.9
AUR62006483 Chenopodium quinoa HOM05D001959 ORTHO05D001955 2.4e-25 120.6 259 34.7
MSTRG.17855 Avicennia marina HOM05D001959 ORTHO05D001955 3.1e-25 120.2 543 26.7
FvH4_3g33920 Fragaria vesca HOM05D001959 ORTHO05D001955 3.1e-25 120.2 272 35.7
Prupe.6G091300 Prunus persica HOM05D001959 ORTHO05D001955 3.1e-25 120.2 269 33.8
Glyma.15G044500 Glycine max HOM05D001959 ORTHO05D001955 4.1e-25 119.8 266 36.8
AUR62025044 Chenopodium quinoa HOM05D001959 ORTHO05D001955 5.3e-25 119.4 256 35.2
AUR62025045 Chenopodium quinoa HOM05D001959 ORTHO05D001955 7.0e-25 119.0 259 34.7
TWI75G0843 Tripterygium wilfordii HOM05D001959 ORTHO05D001955 7.0e-25 119.0 266 34.2
Potri.009G026200 Populus trichocarpa HOM05D001959 ORTHO05D001955 1.2e-24 118.2 289 32.9
Sabra09G0017400 Salix brachista HOM05D001959 ORTHO05D001955 1.2e-24 118.2 291 33.0
CANSAT54G1232 Cannabis sativa HOM05D001959 ORTHO05D001955 1.6e-24 117.9 268 36.2
CsaV3_6G021850 Cucumis sativus L. HOM05D001959 ORTHO05D001955 1.6e-24 117.9 260 35.0
Gorai.013G266000 Gossypium raimondii HOM05D001959 ORTHO05D001955 1.6e-24 117.9 271 35.1
FAN11G3580 Fragaria x ananassa HOM05D001959 ORTHO05D001955 3.5e-24 116.7 272 35.3
MELO3C025725.2 Cucumis melo HOM05D001959 ORTHO05D001955 5.9e-24 115.9 265 35.1
Manes.04G026900 Manihot esculenta HOM05D001959 ORTHO05D001955 5.9e-24 115.9 264 36.0
CSS0023988 Camellia sinensis var. sinensis HOM05D001959 ORTHO05D001955 7.7e-24 115.5 267 34.8
Migut.N02636 Erythranthe guttata HOM05D001959 ORTHO05D001955 1.0e-23 115.2 298 32.9
VMungo1080G1499 Vigna mungo HOM05D001959 ORTHO05D001955 1.7e-23 114.4 266 35.0
QL01p035905 Quercus lobata HOM05D001959 ORTHO05D001955 2.2e-23 114.0 262 34.4
TWI79G1131 Tripterygium wilfordii HOM05D001959 ORTHO05D001955 6.5e-23 112.5 270 33.3
Hma1.2p1_1731F.1_g299750 Hydrangea macrophylla HOM05D001959 ORTHO05D001955 8.5e-23 112.1 268 34.7
Oeu062274.1 Olea europaea HOM05D001959 ORTHO05D001955 1.5e-22 111.3 556 23.7
ECA247G3976 Erigeron canadensis HOM05D001959 ORTHO05D001955 2.5e-22 110.5 253 36.8
Solyc06g005190.4 Solanum lycopersicum HOM05D001959 ORTHO05D001955 2.5e-22 110.5 144 47.2
Gorai.009G104400 Gossypium raimondii HOM05D001959 ORTHO05D001955 4.2e-22 109.8 258 35.3
Glyma.13G329600 Glycine max HOM05D001959 ORTHO05D001955 9.4e-22 108.6 245 37.1
Sed0023055 Sechium edule HOM05D001959 ORTHO05D001955 1.2e-21 108.2 262 33.6
CiPaw.13G104800 Carya illinoinensis HOM05D001959 ORTHO05D001955 4.7e-21 106.3 268 33.2
Ah.01g014730 Amaranthus hybridus HOM05D001959 ORTHO05D001955 6.1e-21 105.9 255 32.2
FAN21G0873 Fragaria x ananassa HOM05D001959 ORTHO05D001955 8.0e-21 105.5 290 33.8
Manes.11G139600 Manihot esculenta HOM05D001959 ORTHO05D001955 1.4e-20 104.8 288 32.6
Sed0025423 Sechium edule HOM05D001959 ORTHO05D001955 1.8e-20 104.4 290 33.1
ClCG02G020770 Citrullus lanatus HOM05D001959 ORTHO05D001955 2.3e-20 104.0 227 33.9
Oeu058503.1 Olea europaea HOM05D001959 ORTHO05D001955 4.0e-20 103.2 246 34.1
Gorai.004G002000 Gossypium raimondii HOM05D001959 ORTHO05D001955 5.2e-20 102.8 262 33.6
Lalb_Chr14g0374841 Lupinus albus HOM05D001959 ORTHO05D001955 6.7e-20 102.4 264 35.2
TAR369G0440 Trochodendron aralioides HOM05D001959 ORTHO05D001955 2.6e-19 100.5 282 34.0
TAR623G1444 Trochodendron aralioides HOM05D001959 ORTHO05D001955 2.6e-19 100.5 153 45.1
Duzib150G1164 Durio zibethinus HOM05D001959 ORTHO05D001955 4.4e-19 99.8 266 33.1
Actinidia03757 Actinidia chinensis HOM05D001959 ORTHO05D001955 5.7e-19 99.4 139 46.8
Oeu047709.3 Olea europaea HOM05D001959 ORTHO05D001955 5.7e-19 99.4 402 26.1
DCAR_015568 Daucus carota HOM05D001959 ORTHO05D001955 1.7e-18 97.8 257 31.5
Lj2C1042G4 Lonicera japonica HOM05D001959 ORTHO05D001955 2.8e-18 97.1 297 30.6
PGR102G3367 Punica granatum HOM05D001959 ORTHO05D001955 2.8e-18 97.1 297 31.0
HanXRQChr11g0323811 Helianthus annuus HOM05D001959 ORTHO05D001955 3.7e-18 96.7 234 34.6
HanXRQChr08g0229981 Helianthus annuus HOM05D001959 ORTHO05D001955 6.3e-18 95.9 301 31.2
DCAR_018851 Daucus carota HOM05D001959 ORTHO05D001955 1.1e-17 95.1 268 30.6
PGSC0003DMG401017810 Solanum tuberosum HOM05D001959 ORTHO05D001955 3.1e-17 93.6 182 39.0
Migut.D02169 Erythranthe guttata HOM05D001959 ORTHO05D001955 5.3e-17 92.8 254 33.9
RhsimUnG0138900 Rhododendron simsii HOM05D001959 ORTHO05D001955 5.3e-17 92.8 284 30.6
Actinidia07100 Actinidia chinensis HOM05D001959 ORTHO05D001955 7.0e-17 92.4 232 31.9
AT3G45630 Arabidopsis thaliana HOM05D001959 ORTHO05D001955 7.0e-17 92.4 309 28.8
Rhsim13G0090500 Rhododendron simsii HOM05D001959 ORTHO05D001955 7.0e-17 92.4 284 30.6
SalBow3G2001 Salvia bowleyana HOM05D001959 ORTHO05D001955 7.0e-17 92.4 263 32.7
Lsat_1_v5_gn_9_20441 Lactuca sativa HOM05D001959 ORTHO05D001955 9.1e-17 92.0 259 32.8
Lj1C181T4 Lonicera japonica HOM05D001959 ORTHO05D001955 1.2e-16 91.7 126 46.8
CiPaw.13G104900 Carya illinoinensis HOM05D001959 ORTHO05D001955 2.7e-16 90.5 425 26.1
Aa31LG1G12340 Aethionema arabicum HOM05D001959 ORTHO05D001955 3.5e-16 90.1 290 29.7
SalBow3G0541 Salvia bowleyana HOM05D001959 ORTHO05D001955 1.0e-15 88.6 272 30.5
SGA_v2.0_scaffold316G48406 Striga asiatica HOM05D001959 ORTHO05D001955 1.3e-15 88.2 268 30.2
Aqoxy4G03171 Aquilegia oxysepala HOM05D001959 ORTHO05D001955 1.7e-15 87.8 248 29.0
PGR119G2367 Punica granatum HOM05D001959 ORTHO05D001955 1.7e-15 87.8 265 30.6
vmacro03146 Vaccinium macrocarpon HOM05D001959 ORTHO05D001955 5.0e-15 86.3 270 30.0
Eucgr.B02454 Eucalyptus grandis HOM05D001959 ORTHO05D001955 8.5e-15 85.5 289 29.4
Rhsim01G0221800 Rhododendron simsii HOM05D001959 ORTHO05D001955 8.5e-15 85.5 277 31.0
Psat5g276760 Pisum sativum HOM05D001959 ORTHO05D001955 2.5e-14 84.0 128 44.5
PSO339G1092 Papaver somniferum HOM05D001959 ORTHO05D001955 5.5e-14 82.8 261 31.4
Carub.0005s1148 Capsella rubella HOM05D001959 ORTHO05D001955 7.2e-14 82.4 350 26.0
Dinv11816 Davidia involucrata HOM05D001959 ORTHO05D001955 1.2e-13 81.6 290 27.9
vmacro14484 Vaccinium macrocarpon HOM05D001959 ORTHO05D001955 1.2e-13 81.6 303 28.1
AUR62006487 Chenopodium quinoa HOM05D001959 ORTHO05D001955 2.7e-13 80.5 184 33.7
Actinidia37283 Actinidia chinensis HOM05D001959 ORTHO05D001955 3.6e-13 80.1 59 67.8
BcaC04g19661 Brassica carinata HOM05D001959 ORTHO05D001955 3.6e-13 80.1 215 34.4
AL5G24250 Arabidopsis lyrata HOM05D001959 ORTHO05D001955 6.1e-13 79.3 292 27.4
CDE07G0589 Ceratophyllum demersum HOM05D001959 ORTHO05D001955 8.0e-13 79.0 251 31.5
DCAR_018847 Daucus carota HOM05D001959 ORTHO05D001955 4.0e-12 76.6 126 40.5
THA.LOC104810834 Tarenaya hassleriana HOM05D001959 ORTHO05D001955 5.2e-12 76.3 256 32.8
HanXRQChr01g0001971 Helianthus annuus HOM05D001959 ORTHO05D001955 1.2e-11 75.1 208 31.7
Sc15g0007260 Simmondsia chinensis HOM05D001959 ORTHO05D001955 1.2e-11 75.1 62 58.1
THA.LOC104799481 Tarenaya hassleriana HOM05D001959 ORTHO05D001955 1.2e-11 75.1 182 34.6
TAR623G0850 Trochodendron aralioides HOM05D001959 ORTHO05D001955 1.2e-11 75.1 62 61.3
Dinv31369 Davidia involucrata HOM05D001959 ORTHO05D001955 9.8e-11 72.0 247 28.7
PSO384G1408 Papaver somniferum HOM05D001959 ORTHO05D001955 1.7e-10 71.2 250 30.0
PGSC0003DMG402017810 Solanum tuberosum HOM05D001959 ORTHO05D001955 1.7e-10 71.2 95 44.2
Aa31LG4G14820 Aethionema arabicum HOM05D001959 ORTHO05D001955 2.2e-10 70.9 285 26.3
Carub.0008s2090 Capsella rubella HOM05D001959 ORTHO05D001955 2.8e-10 70.5 256 31.2
Thecc.05G053100 Theobroma cacao HOM05D001959 ORTHO05D001955 8.3e-10 68.9 269 29.4
BraA06t25220Z Brassica rapa HOM05D001959 ORTHO05D001955 1.1e-09 68.6 170 33.5
Thhalv10012563m.g Eutrema salsugineum HOM05D001959 ORTHO05D001955 1.8e-09 67.8 349 28.1
Thhalv10012567m.g Eutrema salsugineum HOM05D001959 ORTHO05D001955 1.8e-09 67.8 349 28.1
Actinidia38242 Actinidia chinensis HOM05D001959 ORTHO05D001955 2.4e-09 67.4 284 26.4
THA.LOC104826353 Tarenaya hassleriana HOM05D001959 ORTHO05D001955 2.4e-09 67.4 152 34.2
CSS0003168 Camellia sinensis var. sinensis HOM05D001959 ORTHO05D001955 4.1e-09 66.6 249 26.9
Dinv32813 Davidia involucrata HOM05D001959 ORTHO05D001955 4.1e-09 66.6 75 46.7
BolC3t19266H Brassica oleracea HOM05D001959 ORTHO05D001955 7.0e-09 65.9 153 35.3
BraA03t10447Z Brassica rapa HOM05D001959 ORTHO05D001955 1.6e-08 64.7 267 29.6
Gohir.A05G100500 Gossypium hirsutum HOM05D001959 ORTHO05D001955 1.6e-08 64.7 127 40.9
Sc21g0000150 Simmondsia chinensis HOM05D001959 ORTHO05D001955 2.0e-08 64.3 123 39.8
A06p21320 Brassica napus HOM05D001959 ORTHO05D001955 2.7e-08 63.9 147 36.1
Actinidia03020 Actinidia chinensis HOM05D001959 ORTHO05D001955 3.5e-08 63.5 240 26.2
BcaC01g01962 Brassica carinata HOM05D001959 ORTHO05D001955 3.5e-08 63.5 147 36.1
C03p13080 Brassica napus HOM05D001959 ORTHO05D001955 3.5e-08 63.5 304 28.0
C03p70080 Brassica napus HOM05D001959 ORTHO05D001955 3.5e-08 63.5 147 36.1
BolC3t13771H Brassica oleracea HOM05D001959 ORTHO05D001955 5.9e-08 62.8 304 27.0
AT5G60170 Arabidopsis thaliana HOM05D001959 ORTHO05D001955 2.2e-07 60.8 235 29.8
Atru.chr8.2548 Acer truncatum HOM05D001959 ORTHO05D001955 2.9e-07 60.5 62 50.0
AL8G36780 Arabidopsis lyrata HOM05D001959 ORTHO05D001955 2.9e-07 60.5 284 28.2
BcaB01g01080 Brassica carinata HOM05D001959 ORTHO05D001955 2.9e-07 60.5 137 34.3
Manes.09G080400 Manihot esculenta HOM05D001959 ORTHO05D001955 3.8e-07 60.1 61 50.8
QL07p045416 Quercus lobata HOM05D001959 ORTHO05D001955 3.8e-07 60.1 63 47.6
BcaB05g22626 Brassica carinata HOM05D001959 ORTHO05D001955 6.5e-07 59.3 339 25.7
PSO384G2068 Papaver somniferum HOM05D001959 ORTHO05D001955 6.5e-07 59.3 147 34.0
Gohir.D05G100300 Gossypium hirsutum HOM05D001959 ORTHO05D001955 8.5e-07 58.9 179 27.4
Ciclev10010976m.g Citrus clementina HOM05D001959 ORTHO05D001955 1.5e-06 58.2 155 34.2
Lsat_1_v5_gn_5_164641 Lactuca sativa HOM05D001959 ORTHO05D001955 1.5e-06 58.2 114 43.0
AL8G10110 Arabidopsis lyrata HOM05D001959 ORTHO05D001955 1.9e-06 57.8 217 25.8
DCAR_006476 Daucus carota HOM05D001959 ORTHO05D001955 2.5e-06 57.4 253 27.3
Haze_20663 Corylus avellana HOM05D001959 ORTHO05D001955 4.2e-06 56.6 91 39.6
Hma1.2p1_0786F.1_g217610 Hydrangea macrophylla HOM05D001959 ORTHO05D001955 4.2e-06 56.6 86 38.4
Cfa017499 Carpinus fangiana HOM05D001959 ORTHO05D001955 5.5e-06 56.2 126 34.1
Gohir.A08G000088 Gossypium hirsutum HOM05D001959 ORTHO05D001955 7.2e-06 55.8 142 28.9
unitig_747.g22012 Utricularia gibba HOM05D001959 ORTHO05D001955 9.5e-06 55.5 130 36.2


User provided reference genes

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