Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000349g0040 Nicotiana tabacum HOM05D004689 ORTHO05D006269 5.2e-70 267.7 144 100.0
Peaxi162Scf00407g00631 Petunia axillaris HOM05D004689 ORTHO05D006269 1.3e-28 130.2 90 75.6
MELO3C009381.2 Cucumis melo HOM05D004689 ORTHO05D006269 2.9e-28 129.0 91 73.6
CsaV3_3G036230 Cucumis sativus L. HOM05D004689 ORTHO05D006269 2.9e-28 129.0 91 73.6
Nitab4.5_0002373g0090 Nicotiana tabacum HOM05D004689 ORTHO05D006269 3.8e-28 128.6 91 74.7
MSTRG.19190 Avicennia marina HOM05D004689 ORTHO05D006269 4.9e-28 128.3 90 74.4
Manes.09G064318 Manihot esculenta HOM05D004689 ORTHO05D006269 8.4e-28 127.5 91 73.6
CSS0004382 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 3.2e-27 125.6 91 72.5
CSS0024828 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 3.2e-27 125.6 91 72.5
ClCG10G019870 Citrullus lanatus HOM05D004689 ORTHO05D006269 4.1e-27 125.2 88 73.9
RhsimUnG0004400 Rhododendron simsii HOM05D004689 ORTHO05D006269 9.2e-27 124.0 91 72.5
RhsimUnG0067800 Rhododendron simsii HOM05D004689 ORTHO05D006269 9.2e-27 124.0 91 72.5
Haze_19437 Corylus avellana HOM05D004689 ORTHO05D006269 1.2e-26 123.6 91 70.3
Glyma.15G005900 Glycine max HOM05D004689 ORTHO05D006269 1.2e-26 123.6 91 70.3
Glyma.13G367400 Glycine max HOM05D004689 ORTHO05D006269 1.6e-26 123.2 91 70.3
arahy.Tifrunner.gnm1.ann1.0YCB9L Arachis hypogaea HOM05D004689 ORTHO05D006269 2.1e-26 122.9 91 70.3
arahy.Tifrunner.gnm1.ann1.98D3Z3 Arachis hypogaea HOM05D004689 ORTHO05D006269 2.1e-26 122.9 91 70.3
Cfa021476 Carpinus fangiana HOM05D004689 ORTHO05D006269 2.7e-26 122.5 91 69.2
TAR369G0565 Trochodendron aralioides HOM05D004689 ORTHO05D006269 2.7e-26 122.5 91 71.4
VMungo0917G0001 Vigna mungo HOM05D004689 ORTHO05D006269 2.7e-26 122.5 91 71.4
Lj3g0015942 Lotus japonicus HOM05D004689 ORTHO05D006269 3.5e-26 122.1 91 70.3
Phvul.005G180000 Phaseolus vulgaris HOM05D004689 ORTHO05D006269 3.5e-26 122.1 91 70.3
FAN02G2373 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.0e-25 120.6 91 69.2
FAN05G0091 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.0e-25 120.6 91 69.2
FAN05G3347 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.0e-25 120.6 91 69.2
FAN09G4523 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.0e-25 120.6 91 69.2
FAN14G4883 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.0e-25 120.6 91 69.2
Atru.chr8.1747 Acer truncatum HOM05D004689 ORTHO05D006269 1.3e-25 120.2 90 70.0
Ca_23152_v3 Cicer arietinum L. HOM05D004689 ORTHO05D006269 1.7e-25 119.8 92 70.7
QL03p020097 Quercus lobata HOM05D004689 ORTHO05D006269 1.7e-25 119.8 91 68.1
Sed0022535 Sechium edule HOM05D004689 ORTHO05D006269 2.3e-25 119.4 86 70.9
TAR633G1835 Trochodendron aralioides HOM05D004689 ORTHO05D006269 2.3e-25 119.4 91 70.3
Haze_06063 Corylus avellana HOM05D004689 ORTHO05D023802 3.0e-25 119.0 91 68.1
Lalb_Chr10g0099851 Lupinus albus HOM05D004689 ORTHO05D006269 3.0e-25 119.0 90 68.9
vmacro08797 Vaccinium macrocarpon HOM05D004689 ORTHO05D006269 3.0e-25 119.0 91 68.1
GSVIVG01033687001 Vitis vinifera HOM05D004689 ORTHO05D006269 3.0e-25 119.0 88 72.7
PGSC0003DMG400003874 Solanum tuberosum HOM05D004689 ORTHO05D006269 3.9e-25 118.6 91 70.3
Solyc09g008470.4 Solanum lycopersicum HOM05D004689 ORTHO05D006269 5.1e-25 118.2 91 70.3
CiPaw.10G001700 Carya illinoinensis HOM05D004689 ORTHO05D006269 6.6e-25 117.9 91 68.1
Nn6g35217 Nelumbo nucifera HOM05D004689 ORTHO05D006269 6.6e-25 117.9 93 69.9
CANSAT80G2663 Cannabis sativa HOM05D004689 ORTHO05D006269 8.7e-25 117.5 91 69.2
FvH4_6g16880 Fragaria vesca HOM05D004689 ORTHO05D006269 8.7e-25 117.5 80 73.8
Actinidia32476 Actinidia chinensis HOM05D004689 ORTHO05D006269 1.1e-24 117.1 91 70.3
Cpa.g.sc87.109 Carica papaya HOM05D004689 ORTHO05D006269 1.1e-24 117.1 88 70.5
Duzib128G1555 Durio zibethinus HOM05D004689 ORTHO05D006269 1.1e-24 117.1 80 72.5
Dinv35815 Davidia involucrata HOM05D004689 ORTHO05D006269 1.5e-24 116.7 80 73.8
Lalb_Chr04g0254861 Lupinus albus HOM05D004689 ORTHO05D006269 1.9e-24 116.3 90 67.8
unitig_26.g9238 Utricularia gibba HOM05D004689 ORTHO05D006269 1.9e-24 116.3 89 69.7
Ciclev10012150m.g Citrus clementina HOM05D004689 ORTHO05D006269 2.5e-24 115.9 79 74.7
Sopen09g003300 Solanum pennellii HOM05D004689 ORTHO05D006269 2.5e-24 115.9 91 69.2
Cc06_g04560 Coffea canephora HOM05D004689 ORTHO05D006269 3.3e-24 115.5 80 75.0
Medtr8g009970 Medicago truncatula HOM05D004689 ORTHO05D006269 3.3e-24 115.5 92 64.1
EL10Ac7g16690 Beta vulgaris HOM05D004689 ORTHO05D006269 4.3e-24 115.2 90 66.7
CAN.G1038.16 Capsicum annuum HOM05D004689 ORTHO05D006269 4.3e-24 115.2 91 69.2
Haze_05755 Corylus avellana HOM05D004689 ORTHO05D006269 4.3e-24 115.2 85 69.4
AUR62026953 Chenopodium quinoa HOM05D004689 ORTHO05D006269 9.6e-24 114.0 90 66.7
DCAR_020804 Daucus carota HOM05D004689 ORTHO05D006269 1.2e-23 113.6 90 68.9
RcHm_v2.0_Chr7g0191101 Rosa chinensis HOM05D004689 ORTHO05D006269 1.6e-23 113.2 91 67.0
TWI74G0641 Tripterygium wilfordii HOM05D004689 ORTHO05D006269 1.6e-23 113.2 82 70.7
Migut.J00456 Erythranthe guttata HOM05D004689 ORTHO05D006269 2.1e-23 112.8 90 67.8
Hund19382 Selenicereus undatus HOM05D004689 ORTHO05D006269 2.8e-23 112.5 88 69.3
MBI17_g39319_MAGBIO Magnolia biondii HOM05D004689 ORTHO05D006269 3.6e-23 112.1 93 65.6
Ah.15g091430 Amaranthus hybridus HOM05D004689 ORTHO05D006269 4.7e-23 111.7 90 66.7
TPR.G17360 Trifolium pratense HOM05D004689 ORTHO05D006269 4.7e-23 111.7 92 64.1
CDE06G0795 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 6.2e-23 111.3 93 68.8
Potri.016G097600 Populus trichocarpa HOM05D004689 ORTHO05D006269 6.2e-23 111.3 90 63.3
Eucgr.K02436 Eucalyptus grandis HOM05D004689 ORTHO05D006269 8.1e-23 110.9 73 75.3
PSO675G8307 Papaver somniferum HOM05D004689 ORTHO05D006269 8.1e-23 110.9 92 68.5
Sc20g0005690 Simmondsia chinensis HOM05D004689 ORTHO05D006269 8.1e-23 110.9 90 65.6
Nitab4.5_0003314g0100 Nicotiana tabacum HOM05D004689 ORTHO05D006269 1.4e-22 110.2 70 78.6
Lsat_1_v5_gn_1_52460 Lactuca sativa HOM05D004689 ORTHO05D006269 1.8e-22 109.8 86 67.4
SGA_v2.0_scaffold40G15470 Striga asiatica HOM05D004689 ORTHO05D006269 2.4e-22 109.4 94 63.8
Ah.08g211440 Amaranthus hybridus HOM05D004689 ORTHO05D006269 3.1e-22 109.0 90 65.6
CARHR126450 Cardamine hirsuta HOM05D004689 ORTHO05D006269 3.1e-22 109.0 79 73.4
Prupe.7G125300 Prunus persica HOM05D004689 ORTHO05D006269 4.0e-22 108.6 90 65.6
Sabra06G0095500 Salix brachista HOM05D004689 ORTHO05D006269 4.0e-22 108.6 85 64.7
THA.LOC104816037 Tarenaya hassleriana HOM05D004689 ORTHO05D006269 4.0e-22 108.6 79 68.4
Potri.006G121300 Populus trichocarpa HOM05D004689 ORTHO05D006269 5.2e-22 108.2 85 64.7
RcHm_v2.0_Chr3g0470901 Rosa chinensis HOM05D004689 ORTHO05D006269 5.2e-22 108.2 72 75.0
Thecc.05G071600 Theobroma cacao HOM05D004689 ORTHO05D006269 5.2e-22 108.2 73 74.0
Thecc.05G071900 Theobroma cacao HOM05D004689 ORTHO05D006269 5.2e-22 108.2 73 74.0
Gohir.D09G140400 Gossypium hirsutum HOM05D004689 ORTHO05D006269 6.9e-22 107.8 80 68.8
Gorai.006G161000 Gossypium raimondii HOM05D004689 ORTHO05D006269 6.9e-22 107.8 80 68.8
PSO541G4270 Papaver somniferum HOM05D004689 ORTHO05D006269 6.9e-22 107.8 91 67.0
AL4G28000 Arabidopsis lyrata HOM05D004689 ORTHO05D006269 1.2e-21 107.1 79 72.2
Carub.0004s1393 Capsella rubella HOM05D004689 ORTHO05D006269 1.2e-21 107.1 82 69.5
PGR119G0162 Punica granatum HOM05D004689 ORTHO05D006269 1.5e-21 106.7 73 72.6
Sp4g14930 Schrenkiella parvula HOM05D004689 ORTHO05D006269 1.5e-21 106.7 84 66.7
Oeu042111.1 Olea europaea HOM05D004689 ORTHO05D006269 2.0e-21 106.3 70 77.1
Aa31LG5G4730 Aethionema arabicum HOM05D004689 ORTHO05D006269 5.8e-21 104.8 68 76.5
AT2G32600 Arabidopsis thaliana HOM05D004689 ORTHO05D006269 5.8e-21 104.8 79 70.9
CDE03G0163 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 5.8e-21 104.8 93 65.6
Gohir.A09G144600 Gossypium hirsutum HOM05D004689 ORTHO05D006269 5.8e-21 104.8 80 67.5
COL.COLO4_26909 Corchorus olitorius HOM05D004689 ORTHO05D006269 1.3e-20 103.6 70 72.9
Hma1.2p1_0225F.1_g095000 Hydrangea macrophylla HOM05D004689 ORTHO05D006269 2.2e-20 102.8 75 68.0
Aqoxy2G01650 Aquilegia oxysepala HOM05D004689 ORTHO05D006269 3.8e-20 102.1 70 74.3
AUR62043425 Chenopodium quinoa HOM05D004689 ORTHO05D006269 3.8e-20 102.1 75 69.3
A05p13300 Brassica napus HOM05D004689 ORTHO05D006269 6.4e-20 101.3 82 65.9
C04p17070 Brassica napus HOM05D004689 ORTHO05D006269 6.4e-20 101.3 82 65.9
BolC4t23259H Brassica oleracea HOM05D004689 ORTHO05D006269 6.4e-20 101.3 82 65.9
BraA05t20271Z Brassica rapa HOM05D004689 ORTHO05D006269 6.4e-20 101.3 82 65.9
ATR0118G005 Amborella trichopoda HOM05D004689 ORTHO05D006269 8.4e-20 100.9 75 69.3
Thhalv10017051m.g Eutrema salsugineum HOM05D004689 ORTHO05D006269 8.4e-20 100.9 82 67.1
Zm00001eb011590 Zea mays HOM05D004689 ORTHO05D006269 8.4e-20 100.9 85 63.5
Actinidia31313 Actinidia chinensis HOM05D004689 ORTHO05D006269 1.1e-19 100.5 57 82.5
Psat0s2549g0120 Pisum sativum HOM05D004689 ORTHO05D006269 1.1e-19 100.5 57 80.7
Psat6g037120 Pisum sativum HOM05D005082 ORTHO05D006474 1.1e-19 100.5 57 80.7
ECA238G3499 Erigeron canadensis HOM05D004689 ORTHO05D006269 1.9e-19 99.8 86 64.0
Psat1g060440 Pisum sativum HOM05D004689 ORTHO05D006269 3.2e-19 99.0 57 78.9
Lj3C990G15 Lonicera japonica HOM05D004689 ORTHO05D006269 4.2e-19 98.6 58 79.3
SEGI_10194 Sequoiadendron giganteum HOM05D004689 ORTHO05D006269 4.2e-19 98.6 88 60.2
HanXRQChr13g0402661 Helianthus annuus HOM05D004689 ORTHO05D006269 7.1e-19 97.8 70 70.0
MD12G1106500 Malus domestica HOM05D004689 ORTHO05D006269 9.3e-19 97.4 73 68.5
AUR62043819 Chenopodium quinoa HOM05D004689 ORTHO05D006269 1.6e-18 96.7 58 77.6
Carub.0007s3257 Capsella rubella HOM05D004689 ORTHO05D006269 4.6e-18 95.1 78 65.4
HPP92_017214 Vanilla planifolia HOM05D004689 ORTHO05D006269 4.6e-18 95.1 82 59.8
Zm00001eb398100 Zea mays HOM05D004689 ORTHO05D006269 1.0e-17 94.0 91 59.3
Prupe.4G071900 Prunus persica HOM05D004689 ORTHO05D006269 1.3e-17 93.6 77 63.6
Pp3c15_8160 Physcomitrium patens HOM05D004689 ORTHO05D006269 8.7e-17 90.9 84 59.5
AagrBONN_evm.TU.Sc2ySwM_344.454 Anthoceros agrestis HOM05D004689 ORTHO05D006269 2.5e-16 89.4 90 58.9
Mapoly0069s0004 Marchantia polymorpha HOM05D004689 ORTHO05D006269 2.5e-16 89.4 75 61.3
CBR_g54837 Chara braunii HOM05D004689 ORTHO05D006269 1.3e-15 87.0 76 56.6
Pp3c9_13030 Physcomitrium patens HOM05D004689 ORTHO05D006269 4.8e-15 85.1 90 53.3
AagrBONN_evm.TU.Sc2ySwM_344.3466 Anthoceros agrestis HOM05D004689 ORTHO05D006269 6.2e-15 84.7 84 57.1
Os03g0263500 Oryza sativa ssp. japonica HOM05D004689 ORTHO05D006269 1.1e-14 84.0 84 54.8
MD04G1088800 Malus domestica HOM05D004689 ORTHO05D006269 1.8e-14 83.2 59 71.2
SMO228G0117 Selaginella moellendorffii HOM05D004689 ORTHO05D006269 2.4e-14 82.8 84 58.3
MCO12G316 Micromonas commoda HOM05D004689 ORTHO05D006269 4.9e-12 75.1 70 52.9
Haze_13658 Corylus avellana HOM05D004689 ORTHO05D023802 1.2e-10 70.5 60 61.7
Cre06.g252700 Chlamydomonas reinhardtii HOM05D004689 ORTHO05D006269 1.6e-10 70.1 58 48.3
PRCOL_00004335 Prasinoderma coloniale HOM05D004689 ORTHO05D006269 3.3e-08 62.4 63 47.6
Haze_26764 Corylus avellana HOM05D004689 ORTHO05D006269 5.3e-06 55.1 40 65.0
BcaB02g10459 Brassica carinata HOM05D004689 ORTHO05D006269 9.0e-06 54.3 32 78.1


User provided reference genes

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