Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000200g0180 Nicotiana tabacum HOM05D004707 ORTHO05D005837 1.5e-164 582.8 294 100.0
Nitab4.5_0000690g0060 Nicotiana tabacum HOM05D004707 ORTHO05D005837 1.1e-156 556.6 290 96.9
CAN.G91.14 Capsicum annuum HOM05D004707 ORTHO05D005837 5.3e-138 494.6 290 84.8
Sopen10g005800 Solanum pennellii HOM05D004707 ORTHO05D005837 1.9e-135 486.1 289 85.1
Solyc10g012060.3 Solanum lycopersicum HOM05D004707 ORTHO05D005837 4.2e-135 485.0 289 85.5
Solyc10g012050.3 Solanum lycopersicum HOM05D004707 ORTHO05D005837 1.0e-117 427.2 292 75.7
Sopen10g005790 Solanum pennellii HOM05D004707 ORTHO05D005837 1.8e-117 426.4 292 75.0
Peaxi162Scf00585g00318 Petunia axillaris HOM05D004707 ORTHO05D005837 1.0e-109 400.6 274 77.0
Dinv43847 Davidia involucrata HOM05D004707 ORTHO05D005837 4.1e-106 388.7 282 68.8
CSS0041396 Camellia sinensis var. sinensis HOM05D004707 ORTHO05D005837 5.7e-100 368.2 282 65.6
Oeu015224.1 Olea europaea HOM05D004707 ORTHO05D005837 1.5e-95 353.6 284 62.0
Cc00_g17840 Coffea canephora HOM05D004707 ORTHO05D005837 1.6e-94 350.1 270 66.7
Lj9C587T4 Lonicera japonica HOM05D004707 ORTHO05D005837 2.8e-94 349.4 220 75.9
Thecc.01G355200 Theobroma cacao HOM05D004707 ORTHO05D005837 2.6e-92 342.8 283 62.2
Haze_15544 Corylus avellana HOM05D004707 ORTHO05D005837 3.4e-92 342.4 288 60.8
Rhsim01G0164800 Rhododendron simsii HOM05D004707 ORTHO05D005837 1.3e-91 340.5 270 63.3
Potri.014G088200 Populus trichocarpa HOM05D004707 ORTHO05D005837 1.7e-91 340.1 289 60.2
TAR375G0400 Trochodendron aralioides HOM05D004707 ORTHO05D005837 1.9e-90 336.7 257 65.4
Potri.002G162100 Populus trichocarpa HOM05D004707 ORTHO05D005837 4.1e-90 335.5 275 62.2
CiPaw.01G064900 Carya illinoinensis HOM05D004707 ORTHO05D005837 2.7e-89 332.8 273 62.3
DCAR_008625 Daucus carota HOM05D001113 ORTHO05D000968 7.8e-89 331.3 259 65.6
Prupe.2G174600 Prunus persica HOM05D004707 ORTHO05D005837 1.7e-88 330.1 277 60.3
PGR031G2856 Punica granatum HOM05D004707 ORTHO05D005837 3.0e-88 329.3 273 59.0
vmacro20909 Vaccinium macrocarpon HOM05D004707 ORTHO05D005837 1.2e-86 323.9 294 56.8
Ca_23597_v3 Cicer arietinum L. HOM05D004707 ORTHO05D005837 2.8e-86 322.8 287 55.4
Eucgr.D02313 Eucalyptus grandis HOM05D004707 ORTHO05D005837 8.1e-86 321.2 257 63.0
Atru.chr5.540 Acer truncatum HOM05D004707 ORTHO05D005837 1.1e-85 320.9 271 59.4
Ciclev10028150m.g Citrus clementina HOM05D004707 ORTHO05D005837 1.8e-85 320.1 284 60.6
TWI59G0961 Tripterygium wilfordii HOM05D004707 ORTHO05D005837 1.8e-85 320.1 266 58.6
VMungo0331G0696 Vigna mungo HOM05D004707 ORTHO05D005837 8.9e-85 317.8 273 56.4
Glyma.16G033400 Glycine max HOM05D004707 ORTHO05D005837 2.0e-84 316.6 256 60.2
Lj3g0007734 Lotus japonicus HOM05D004707 ORTHO05D005837 2.0e-84 316.6 266 58.6
SGA_v2.0_scaffold95G28817 Striga asiatica HOM05D004707 ORTHO05D005837 2.0e-84 316.6 307 54.1
arahy.Tifrunner.gnm1.ann1.HL3201 Arachis hypogaea HOM05D004707 ORTHO05D005837 2.6e-84 316.2 286 54.2
Gorai.004G041800 Gossypium raimondii HOM05D004707 ORTHO05D005837 3.4e-84 315.8 261 62.5
Sc06g0007250 Simmondsia chinensis HOM05D004707 ORTHO05D005837 5.8e-84 315.1 279 56.6
Actinidia18541 Actinidia chinensis HOM05D004707 ORTHO05D005837 7.5e-84 314.7 256 62.5
Gohir.A08G032300 Gossypium hirsutum HOM05D004707 ORTHO05D005837 7.5e-84 314.7 267 60.7
Lsat_1_v5_gn_4_43000 Lactuca sativa HOM05D004707 ORTHO05D005837 9.8e-84 314.3 274 56.9
Glyma.07G067400 Glycine max HOM05D004707 ORTHO05D005837 1.3e-83 313.9 272 55.1
Hund16663 Selenicereus undatus HOM05D004707 ORTHO05D005837 1.3e-83 313.9 291 54.3
RcHm_v2.0_Chr1g0357041 Rosa chinensis HOM05D004707 ORTHO05D005837 1.7e-83 313.5 290 58.3
arahy.Tifrunner.gnm1.ann1.YM6R3T Arachis hypogaea HOM05D004707 ORTHO05D005837 2.9e-83 312.8 286 55.2
Nn6g33309 Nelumbo nucifera HOM05D004707 ORTHO05D005837 2.9e-83 312.8 260 58.1
FvH4_7g15010 Fragaria vesca HOM05D004707 ORTHO05D005837 6.4e-83 311.6 278 60.1
FAN06G3707 Fragaria x ananassa HOM05D004707 ORTHO05D005837 6.4e-83 311.6 278 60.1
FAN06G2758 Fragaria x ananassa HOM05D004707 ORTHO05D005837 8.3e-83 311.2 259 63.7
THA.LOC104825856 Tarenaya hassleriana HOM05D004707 ORTHO05D005837 1.1e-82 310.8 288 55.6
Phvul.010G102400 Phaseolus vulgaris HOM05D004707 ORTHO05D005837 1.4e-82 310.5 273 55.3
COL.COLO4_12751 Corchorus olitorius HOM05D004707 ORTHO05D005837 1.9e-82 310.1 249 63.5
Ah.05g180290 Amaranthus hybridus HOM05D004707 ORTHO05D005837 4.1e-82 308.9 288 55.9
FAN10G2784 Fragaria x ananassa HOM05D004707 ORTHO05D005837 4.1e-82 308.9 278 59.7
FAN03G0218 Fragaria x ananassa HOM05D004707 ORTHO05D005837 5.4e-82 308.5 278 59.7
FAN10G1283 Fragaria x ananassa HOM05D004707 ORTHO05D005837 9.2e-82 307.8 278 59.4
Lalb_Chr04g0259171 Lupinus albus HOM05D004707 ORTHO05D005837 2.1e-81 306.6 273 54.6
FAN01G2554 Fragaria x ananassa HOM05D004707 ORTHO05D005837 3.5e-81 305.8 269 61.0
Psat4g156520 Pisum sativum HOM05D004707 ORTHO05D005837 1.3e-80 303.9 260 56.9
Cpa.g.sc11.45 Carica papaya HOM05D004707 ORTHO05D005837 1.7e-80 303.5 248 59.7
CANSAT56G0368 Cannabis sativa HOM05D004707 ORTHO05D005837 2.3e-80 303.1 277 56.0
Gohir.D12G111000 Gossypium hirsutum HOM05D004707 ORTHO05D005837 3.3e-79 299.3 278 57.2
Gorai.008G120200 Gossypium raimondii HOM05D004707 ORTHO05D005837 9.5e-79 297.7 278 57.2
Manes.01G254000 Manihot esculenta HOM05D004707 ORTHO05D005837 1.2e-78 297.4 262 59.5
CARHR248350 Cardamine hirsuta HOM05D004707 ORTHO05D005837 1.6e-78 297.0 277 57.4
Sed0023991 Sechium edule HOM05D004707 ORTHO05D005837 2.1e-78 296.6 264 56.4
Medtr8g028760 Medicago truncatula HOM05D004707 ORTHO05D005837 4.7e-78 295.4 255 56.9
Gohir.D08G043200 Gossypium hirsutum HOM05D004707 ORTHO05D005837 1.1e-77 294.3 261 59.8
PSO063G6595 Papaver somniferum HOM05D004707 ORTHO05D005837 1.1e-77 294.3 249 57.8
CsaV3_3G008770 Cucumis sativus L. HOM05D004707 ORTHO05D005837 1.8e-77 293.5 294 52.0
ECA234G0026 Erigeron canadensis HOM05D004707 ORTHO05D005837 3.1e-77 292.7 258 57.8
ClCG05G001380 Citrullus lanatus HOM05D004707 ORTHO05D005837 5.2e-77 292.0 286 52.1
MELO3C006094.2 Cucumis melo HOM05D004707 ORTHO05D005837 6.8e-77 291.6 292 52.1
EL10Ac1g00374 Beta vulgaris HOM05D004707 ORTHO05D005837 3.4e-76 289.3 264 54.9
TPR.G14976 Trifolium pratense HOM05D004707 ORTHO05D005837 1.3e-75 287.3 266 54.1
Sp6g00340 Schrenkiella parvula HOM05D004707 ORTHO05D005837 8.4e-75 284.6 254 57.5
vmacro13252 Vaccinium macrocarpon HOM05D004707 ORTHO05D005837 1.1e-74 284.3 275 55.6
Aa31LG5G670 Aethionema arabicum HOM05D004707 ORTHO05D005837 9.2e-74 281.2 277 54.5
Rhsim07G0012400 Rhododendron simsii HOM05D004707 ORTHO05D005837 7.8e-73 278.1 283 52.7
AT4G00290 Arabidopsis thaliana HOM05D004707 ORTHO05D005837 1.3e-72 277.3 247 58.3
Carub.0006s3698 Capsella rubella HOM05D004707 ORTHO05D005837 2.3e-72 276.6 247 58.7
AUR62022601 Chenopodium quinoa HOM05D004707 ORTHO05D005837 3.9e-72 275.8 296 50.7
AUR62004395 Chenopodium quinoa HOM05D004707 ORTHO05D005837 6.6e-72 275.0 296 50.3
AL6G53230 Arabidopsis lyrata HOM05D004707 ORTHO05D005837 5.6e-71 271.9 247 56.7
Aqoxy5G00593 Aquilegia oxysepala HOM05D004707 ORTHO05D005837 2.8e-70 269.6 249 57.0
AT4G00234 Arabidopsis thaliana HOM05D004707 ORTHO05D005837 3.6e-70 269.2 243 58.0
Peaxi162Scf00020g01222 Petunia axillaris HOM05D004707 ORTHO05D005837 6.2e-70 268.5 279 55.9
ATR0661G226 Amborella trichopoda HOM05D004707 ORTHO05D005837 4.0e-69 265.8 249 54.6
A02p24040 Brassica napus HOM05D000315 ORTHO05D000527 4.4e-68 262.3 215 60.0
C02p37880 Brassica napus HOM05D000315 ORTHO05D000527 4.4e-68 262.3 215 60.0
BolC2t09805H Brassica oleracea HOM05D004707 ORTHO05D005837 4.4e-68 262.3 215 60.0
BraA02t07399Z Brassica rapa HOM05D000315 ORTHO05D000527 4.4e-68 262.3 215 60.0
BcaC03g16035 Brassica carinata HOM05D004707 ORTHO05D005837 5.8e-68 261.9 215 59.5
HanXRQChr16g0520681 Helianthus annuus HOM05D004707 ORTHO05D005837 1.7e-67 260.4 278 51.4
BcaB01g02199 Brassica carinata HOM05D004707 ORTHO05D005837 3.8e-67 259.2 213 60.1
Migut.B01788 Erythranthe guttata HOM05D004707 ORTHO05D005837 1.1e-66 257.7 275 50.9
unitig_749.g14344 Utricularia gibba HOM05D004707 ORTHO05D006649 2.1e-65 253.4 277 47.3
Zm00001eb073200 Zea mays HOM05D004707 ORTHO05D005837 2.1e-65 253.4 299 45.8
GSVIVG01026989001 Vitis vinifera HOM05D004707 ORTHO05D005837 5.1e-64 248.8 223 57.8
Gohir.A12G107750 Gossypium hirsutum HOM05D004707 ORTHO05D005837 6.6e-64 248.4 276 50.7
Lalb_Chr17g0339181 Lupinus albus HOM05D004707 ORTHO05D005837 1.1e-63 247.7 225 52.9
vmacro20907 Vaccinium macrocarpon HOM05D004707 ORTHO05D005837 3.3e-63 246.1 268 50.0
SEGI_13365 Sequoiadendron giganteum HOM05D004707 ORTHO05D005837 7.3e-63 245.0 283 47.3
HPP92_025632 Vanilla planifolia HOM05D004707 ORTHO05D005837 4.8e-62 242.3 248 52.8
Os04g0578700 Oryza sativa ssp. japonica HOM05D004707 ORTHO05D005837 1.5e-60 237.3 249 51.0
unitig_26.g9294 Utricularia gibba HOM05D004707 ORTHO05D005837 2.7e-57 226.5 274 44.2
Thhalv10028609m.g Eutrema salsugineum HOM05D004707 ORTHO05D005837 1.9e-55 220.3 220 52.7
SHI13401 Sapria himalayana HOM05D004707 ORTHO05D005837 2.6e-52 209.9 268 45.5
Os02g0681000 Oryza sativa ssp. japonica HOM05D004707 ORTHO05D005837 5.8e-52 208.8 260 43.5
MD01G1068400 Malus domestica HOM05D004707 ORTHO05D005837 1.9e-47 193.7 155 63.9
AagrBONN_evm.TU.Sc2ySwM_344.1481 Anthoceros agrestis HOM05D004707 ORTHO05D005837 8.4e-43 178.3 243 42.4
Pp3c10_20950 Physcomitrium patens HOM05D004707 ORTHO05D005837 1.0e-40 171.4 221 40.3
SMO116G0175 Selaginella moellendorffii HOM05D004707 ORTHO05D005837 1.9e-39 167.2 195 45.6
Mapoly0001s0022 Marchantia polymorpha HOM05D004707 ORTHO05D005837 1.2e-36 157.9 217 40.1
Pp3c14_810 Physcomitrium patens HOM05D004707 ORTHO05D005837 3.2e-34 149.8 173 46.8
Pp3c9_20150 Physcomitrium patens HOM05D004707 ORTHO05D005837 6.1e-33 145.6 168 44.0
Pp3c15_19020 Physcomitrium patens HOM05D004707 ORTHO05D005837 2.3e-32 143.7 152 46.7
Rhsim05G0021600 Rhododendron simsii HOM05D004707 ORTHO05D005837 3.4e-28 129.8 179 41.9
Rhsim05G0008500 Rhododendron simsii HOM05D004707 ORTHO05D005837 1.3e-27 127.9 179 41.3
MBI09_g26550_MAGBIO Magnolia biondii HOM05D004707 ORTHO05D005837 6.3e-22 109.0 94 60.6
HanXRQChr09g0268301 Helianthus annuus HOM05D004707 ORTHO05D005837 1.8e-21 107.5 88 59.1
HanXRQChr11g0349701 Helianthus annuus HOM05D004707 ORTHO05D005837 4.1e-21 106.3 85 61.2
HanXRQChr17g0534491 Helianthus annuus HOM05D004707 ORTHO05D005837 4.1e-21 106.3 85 61.2
Migut.B01027 Erythranthe guttata HOM05D004707 ORTHO05D005837 9.1e-21 105.1 161 37.9
Rhsim07G0181500 Rhododendron simsii HOM05D004707 ORTHO05D005837 1.0e-19 101.7 168 35.1
TAR626G0135 Trochodendron aralioides HOM05D004707 ORTHO05D005837 1.5e-15 87.8 65 69.2
SMO361G0110 Selaginella moellendorffii HOM05D004707 ORTHO05D005837 3.0e-08 63.5 118 28.8
SMO361G0690 Selaginella moellendorffii HOM05D004707 ORTHO05D005837 3.0e-08 63.5 118 28.8
Atru.ctg942.22 Acer truncatum HOM05D004707 ORTHO05D005837 1.2e-07 61.6 66 53.0


User provided reference genes

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