Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000152g0340 Nicotiana tabacum HOM05D003885 ORTHO05D004623 5.7e-89 331.3 214 100.0
Nitab4.5_0010643g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 4.7e-67 258.5 238 62.6
CAN.G492.53 Capsicum annuum HOM05D003885 ORTHO05D004623 2.1e-59 233.0 254 65.4
Peaxi162Scf00139g01026 Petunia axillaris HOM05D003885 ORTHO05D004623 2.1e-59 233.0 251 55.0
Nitab4.5_0005478g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 4.7e-59 231.9 256 56.6
Solyc10g005800.3 Solanum lycopersicum HOM05D003885 ORTHO05D004623 2.6e-57 226.1 255 69.0
Sopen10g001770 Solanum pennellii HOM05D003885 ORTHO05D004623 2.6e-57 226.1 255 69.0
ClCG10G004480 Citrullus lanatus HOM05D003885 ORTHO05D004623 4.4e-57 225.3 254 56.7
MELO3C014122.2 Cucumis melo HOM05D003885 ORTHO05D004623 4.4e-57 225.3 254 60.2
CSS0008032 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 5.7e-57 224.9 254 52.8
CSS0014433 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 5.7e-57 224.9 254 52.8
Sed0017804 Sechium edule HOM05D003885 ORTHO05D004623 5.7e-57 224.9 254 57.9
CsaV3_3G004310 Cucumis sativus L. HOM05D003885 ORTHO05D004623 7.5e-57 224.6 254 59.8
Nitab4.5_0003328g0110 Nicotiana tabacum HOM05D003885 ORTHO05D004623 7.5e-57 224.6 253 64.4
Sopen07g033990 Solanum pennellii HOM05D003885 ORTHO05D004623 7.5e-57 224.6 251 57.8
DCAR_019010 Daucus carota HOM05D003885 ORTHO05D004623 9.8e-57 224.2 252 52.8
DCAR_003369 Daucus carota HOM05D003885 ORTHO05D004623 1.3e-56 223.8 248 53.6
Dinv40883 Davidia involucrata HOM05D003885 ORTHO05D004623 1.3e-56 223.8 252 54.0
PGR083G1050 Punica granatum HOM05D003885 ORTHO05D004623 2.8e-56 222.6 251 55.8
PGSC0003DMG400008684 Solanum tuberosum HOM05D003885 ORTHO05D004623 2.8e-56 222.6 255 66.7
Cc05_g15250 Coffea canephora HOM05D003885 ORTHO05D004623 6.3e-56 221.5 247 52.2
CiPaw.12G140300 Carya illinoinensis HOM05D003885 ORTHO05D004623 1.1e-55 220.7 254 66.5
Lj1C893G21 Lonicera japonica HOM05D003885 ORTHO05D004623 1.1e-55 220.7 249 52.6
THA.LOC104822723 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 1.1e-55 220.7 252 53.6
Sc03g0011570 Simmondsia chinensis HOM05D003885 ORTHO05D004623 2.4e-55 219.5 255 67.5
Haze_09860 Corylus avellana HOM05D003885 ORTHO05D004623 3.1e-55 219.2 254 52.0
VMungo0251G1810 Vigna mungo HOM05D003885 ORTHO05D004623 3.1e-55 219.2 253 56.1
TAR629G2602 Trochodendron aralioides HOM05D003885 ORTHO05D004623 4.1e-55 218.8 254 52.4
Lalb_Chr16g0386671 Lupinus albus HOM05D003885 ORTHO05D004623 7.0e-55 218.0 254 57.1
Phvul.003G220300 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 7.0e-55 218.0 253 58.1
AL3G24950 Arabidopsis lyrata HOM05D003885 ORTHO05D004623 9.1e-55 217.6 254 51.2
MSTRG.14500 Avicennia marina HOM05D003885 ORTHO05D004623 9.1e-55 217.6 247 57.5
AUR62017134 Chenopodium quinoa HOM05D003885 ORTHO05D004623 2.0e-54 216.5 259 50.6
Duzib213G0370 Durio zibethinus HOM05D003885 ORTHO05D004623 2.0e-54 216.5 254 55.1
Nn1g07757 Nelumbo nucifera HOM05D003885 ORTHO05D004623 2.0e-54 216.5 254 53.1
PGSC0003DMG400022160 Solanum tuberosum HOM05D003885 ORTHO05D004623 2.0e-54 216.5 258 54.7
TPR.G2621 Trifolium pratense HOM05D003885 ORTHO05D004623 2.0e-54 216.5 254 51.2
arahy.Tifrunner.gnm1.ann1.JC0UDE Arachis hypogaea HOM05D003885 ORTHO05D004623 2.7e-54 216.1 252 55.2
Cfa016929 Carpinus fangiana HOM05D003885 ORTHO05D004623 2.7e-54 216.1 254 51.6
COL.COLO4_07729 Corchorus olitorius HOM05D003885 ORTHO05D004623 3.5e-54 215.7 254 52.0
vmacro11612 Vaccinium macrocarpon HOM05D003885 ORTHO05D004623 3.5e-54 215.7 253 51.0
Glyma.17G141500 Glycine max HOM05D003885 ORTHO05D004623 4.5e-54 215.3 254 56.3
SalBow2G3065 Salvia bowleyana HOM05D003885 ORTHO05D004623 4.5e-54 215.3 247 62.3
Carub.0003s1256 Capsella rubella HOM05D003885 ORTHO05D004623 5.9e-54 214.9 254 50.8
FAN14G2004 Fragaria x ananassa HOM05D003885 ORTHO05D004623 5.9e-54 214.9 256 52.7
TAR627G0008 Trochodendron aralioides HOM05D003885 ORTHO05D004623 5.9e-54 214.9 254 52.4
Thecc.07G008300 Theobroma cacao HOM05D003885 ORTHO05D004623 7.7e-54 214.5 251 51.4
Rhsim06G0232400 Rhododendron simsii HOM05D003885 ORTHO05D004623 1.0e-53 214.2 252 54.0
Ah.06g181560 Amaranthus hybridus HOM05D003885 ORTHO05D004623 1.3e-53 213.8 256 51.2
AT3G13200 Arabidopsis thaliana HOM05D003885 ORTHO05D004623 1.3e-53 213.8 254 50.4
CARHR087790 Cardamine hirsuta HOM05D003885 ORTHO05D004623 1.3e-53 213.8 254 50.8
Gohir.A13G131100 Gossypium hirsutum HOM05D003885 ORTHO05D004623 1.7e-53 213.4 254 53.9
Gohir.D13G134400 Gossypium hirsutum HOM05D003885 ORTHO05D004623 1.7e-53 213.4 254 53.9
Actinidia30379 Actinidia chinensis HOM05D003885 ORTHO05D004623 2.9e-53 212.6 252 49.2
Aa31LG8G410 Aethionema arabicum HOM05D003885 ORTHO05D004623 2.9e-53 212.6 254 50.0
Gorai.013G150700 Gossypium raimondii HOM05D003885 ORTHO05D004623 2.9e-53 212.6 254 53.5
Medtr4g100970 Medicago truncatula HOM05D003885 ORTHO05D004623 2.9e-53 212.6 254 53.5
GSVIVG01014735001 Vitis vinifera HOM05D003885 ORTHO05D004623 2.9e-53 212.6 254 66.1
Duzib170G0277 Durio zibethinus HOM05D003885 ORTHO05D004623 5.0e-53 211.8 252 64.3
TWI39G1241 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 5.0e-53 211.8 252 49.6
CANSAT56G2895 Cannabis sativa HOM05D003885 ORTHO05D004623 6.5e-53 211.5 252 50.0
Hma1.2p1_0193F.1_g083890 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 6.5e-53 211.5 308 45.5
Aqoxy3G02916 Aquilegia oxysepala HOM05D003885 ORTHO05D004623 8.5e-53 211.1 251 56.2
BcaB06g25479 Brassica carinata HOM05D003885 ORTHO05D004623 8.5e-53 211.1 255 51.0
A05p36370 Brassica napus HOM05D003885 ORTHO05D004623 8.5e-53 211.1 255 51.0
BraA05t22437Z Brassica rapa HOM05D003885 ORTHO05D004623 8.5e-53 211.1 255 51.0
Psat0s1834g0040 Pisum sativum HOM05D003885 ORTHO05D004623 8.5e-53 211.1 254 52.4
SalBow2G0786 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.1e-52 210.7 247 67.2
SalBow2G1425 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.1e-52 210.7 247 67.2
HPP92_015188 Vanilla planifolia HOM05D003885 ORTHO05D004623 1.1e-52 210.7 259 51.4
Ciclev10009386m.g Citrus clementina HOM05D003885 ORTHO05D004623 1.9e-52 209.9 254 53.5
Lj4g0022976 Lotus japonicus HOM05D003885 ORTHO05D004623 1.9e-52 209.9 254 51.2
THA.LOC104815689 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 1.9e-52 209.9 256 52.0
Lalb_Chr05g0221281 Lupinus albus HOM05D003885 ORTHO05D004623 2.5e-52 209.5 254 66.1
Prupe.6G027200 Prunus persica HOM05D003885 ORTHO05D004623 2.5e-52 209.5 256 51.2
Ah.13g073470 Amaranthus hybridus HOM05D003885 ORTHO05D004623 3.2e-52 209.1 258 50.0
Lsat_1_v5_gn_5_188801 Lactuca sativa HOM05D003885 ORTHO05D004623 3.2e-52 209.1 256 56.6
C05p54750 Brassica napus HOM05D003885 ORTHO05D004623 4.2e-52 208.8 255 50.6
BolC5t34149H Brassica oleracea HOM05D003885 ORTHO05D004623 4.2e-52 208.8 255 50.6
Glyma.05G059200 Glycine max HOM05D003885 ORTHO05D004623 4.2e-52 208.8 254 55.1
Manes.03G143400 Manihot esculenta HOM05D003885 ORTHO05D004623 4.2e-52 208.8 252 52.0
Thhalv10021450m.g Eutrema salsugineum HOM05D003885 ORTHO05D004623 5.5e-52 208.4 255 50.6
Lj1g0011673 Lotus japonicus HOM05D003885 ORTHO05D004623 5.5e-52 208.4 254 50.8
Sp3g11380 Schrenkiella parvula HOM05D003885 ORTHO05D004623 5.5e-52 208.4 255 50.6
RcHm_v2.0_Chr3g0480061 Rosa chinensis HOM05D003885 ORTHO05D004623 7.2e-52 208.0 257 54.1
BcaB04g18746 Brassica carinata HOM05D003885 ORTHO05D004623 9.4e-52 207.6 253 50.6
A01p40350 Brassica napus HOM05D003885 ORTHO05D004623 9.4e-52 207.6 253 51.0
BraA01t04070Z Brassica rapa HOM05D003885 ORTHO05D004623 9.4e-52 207.6 253 51.0
ECA246G5298 Erigeron canadensis HOM05D003885 ORTHO05D004623 9.4e-52 207.6 247 51.0
Oeu039420.1 Olea europaea HOM05D003885 ORTHO05D004623 9.4e-52 207.6 245 56.3
SalBow8G3434 Salvia bowleyana HOM05D003885 ORTHO05D004623 9.4e-52 207.6 247 66.8
Migut.M01631 Erythranthe guttata HOM05D003885 ORTHO05D004623 2.1e-51 206.5 247 65.6
Potri.001G370366 Populus trichocarpa HOM05D003885 ORTHO05D004623 2.1e-51 206.5 253 49.4
C01p51880 Brassica napus HOM05D003885 ORTHO05D004623 2.7e-51 206.1 255 51.8
BolC1t05136H Brassica oleracea HOM05D003885 ORTHO05D004623 2.7e-51 206.1 255 50.2
HanXRQChr05g0160321 Helianthus annuus HOM05D003885 ORTHO05D004623 2.7e-51 206.1 252 65.9
MD03G1032500 Malus domestica HOM05D003885 ORTHO05D004623 2.7e-51 206.1 256 50.8
QL08p003216 Quercus lobata HOM05D003885 ORTHO05D004623 2.7e-51 206.1 253 54.5
Atru.chr2.3832 Acer truncatum HOM05D003885 ORTHO05D004623 3.6e-51 205.7 252 50.8
A03p38080 Brassica napus HOM05D003885 ORTHO05D004623 3.6e-51 205.7 255 50.2
BraA03t12961Z Brassica rapa HOM05D003885 ORTHO05D004623 3.6e-51 205.7 255 50.2
FvH4_6g22570 Fragaria vesca HOM05D003885 ORTHO05D004623 3.6e-51 205.7 254 51.2
FAN14G0574 Fragaria x ananassa HOM05D003885 ORTHO05D004623 3.6e-51 205.7 254 51.2
Hund01874 Selenicereus undatus HOM05D003885 ORTHO05D004623 3.6e-51 205.7 255 54.5
TWI38G2335 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 3.6e-51 205.7 252 56.7
FAN05G2176 Fragaria x ananassa HOM05D003885 ORTHO05D004623 4.7e-51 205.3 255 51.4
Hund01875 Selenicereus undatus HOM05D003885 ORTHO05D004623 4.7e-51 205.3 254 54.3
unitig_61.g26133 Utricularia gibba HOM05D003885 ORTHO05D004623 4.7e-51 205.3 248 56.5
Ca_21964_v3 Cicer arietinum L. HOM05D003885 ORTHO05D004623 6.1e-51 204.9 254 52.4
HanXRQChr08g0233271 Helianthus annuus HOM05D003885 ORTHO05D004623 6.1e-51 204.9 252 65.5
SalBow2G3218 Salvia bowleyana HOM05D003885 ORTHO05D004623 6.1e-51 204.9 247 66.0
BolC3t16892H Brassica oleracea HOM05D003885 ORTHO05D004623 8.0e-51 204.5 255 50.2
THA.LOC104810295 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 8.0e-51 204.5 252 52.0
MD11G1036400 Malus domestica HOM05D003885 ORTHO05D004623 1.0e-50 204.1 256 50.4
MSTRG.13030 Avicennia marina HOM05D003885 ORTHO05D004623 1.4e-50 203.8 249 55.8
EL10Ac4g07536 Beta vulgaris HOM05D003885 ORTHO05D004623 1.4e-50 203.8 265 49.1
PSO210G5551 Papaver somniferum HOM05D003885 ORTHO05D004623 2.3e-50 203.0 252 50.0
FAN09G2902 Fragaria x ananassa HOM05D003885 ORTHO05D004623 3.0e-50 202.6 255 51.0
Os06g0106100 Oryza sativa ssp. japonica HOM05D003885 ORTHO05D004623 3.0e-50 202.6 256 49.6
Zm00001eb338740 Zea mays HOM05D003885 ORTHO05D004623 4.0e-50 202.2 256 50.4
Lsat_1_v5_gn_5_2000 Lactuca sativa HOM05D003885 ORTHO05D004623 1.2e-49 200.7 271 62.0
PSO210G1946 Papaver somniferum HOM05D003885 ORTHO05D004623 2.0e-49 199.9 252 49.2
AUR62035674 Chenopodium quinoa HOM05D003885 ORTHO05D004623 3.4e-49 199.1 255 48.6
unitig_0.g990 Utricularia gibba HOM05D003885 ORTHO05D004623 4.4e-49 198.7 248 62.9
Zm00001eb119790 Zea mays HOM05D003885 ORTHO05D004623 5.7e-49 198.4 257 48.6
ATR1153G045 Amborella trichopoda HOM05D003885 ORTHO05D004623 9.8e-49 197.6 255 51.4
Phvul.008G217400 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 9.8e-49 197.6 250 51.6
MBI11_g04749_MAGBIO Magnolia biondii HOM05D003885 ORTHO05D004623 1.3e-48 197.2 257 52.9
Sed0004751 Sechium edule HOM05D003885 ORTHO05D004623 1.3e-48 197.2 254 49.6
Eucgr.F02030 Eucalyptus grandis HOM05D003885 ORTHO05D004623 2.4e-47 193.0 254 51.2
BcaC05g29203 Brassica carinata HOM05D003885 ORTHO05D004623 4.1e-47 192.2 255 48.6
C03p46210 Brassica napus HOM05D003885 ORTHO05D004623 5.9e-46 188.3 239 50.2
Pp3c5_15120 Physcomitrium patens HOM05D003885 ORTHO05D004623 3.6e-43 179.1 255 44.7
Sabra16G0243800 Salix brachista HOM05D003885 ORTHO05D004623 4.7e-43 178.7 266 42.5
FAN02G3468 Fragaria x ananassa HOM05D003885 ORTHO05D004623 8.9e-42 174.5 239 49.0
Mapoly0072s0064 Marchantia polymorpha HOM05D003885 ORTHO05D004623 2.0e-41 173.3 255 43.5
CBR_g58788 Chara braunii HOM05D003885 ORTHO05D004623 7.5e-41 171.4 251 43.4
AagrBONN_evm.TU.Sc2ySwM_228.690 Anthoceros agrestis HOM05D003885 ORTHO05D004623 2.9e-40 169.5 222 51.8
Solyc07g065800.3 Solanum lycopersicum HOM05D003885 ORTHO05D004623 3.0e-37 159.5 193 57.0
SMO356G0623 Selaginella moellendorffii HOM05D003885 ORTHO05D004623 9.8e-33 144.4 255 41.2
CSS0035354 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 2.2e-32 143.3 216 43.1
CAN.G1427.13 Capsicum annuum HOM05D000822 ORTHO05D004949 5.0e-29 132.1 160 55.6
arahy.Tifrunner.gnm1.ann1.BGFV7A Arachis hypogaea HOM05D003885 ORTHO05D004623 1.9e-28 130.2 68 91.2
Hma1.2p1_0133F.1_g061250 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 2.5e-28 129.8 121 61.2
SGA_v2.0_scaffold8G04417 Striga asiatica HOM05D003885 ORTHO05D004623 1.2e-27 127.5 115 60.9
Nn1g07559 Nelumbo nucifera HOM05D003885 ORTHO05D004623 2.8e-27 126.3 123 60.2
MBI19_g41323_MAGBIO Magnolia biondii HOM05D003885 ORTHO05D004623 3.6e-27 125.9 68 86.8
Hma1.2p1_0133F.1_g061260 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 8.1e-27 124.8 68 86.8
TPR.G37600 Trifolium pratense HOM05D003885 ORTHO05D004623 8.1e-27 124.8 68 85.3
MCO14G028 Micromonas commoda HOM05D003885 ORTHO05D004623 1.1e-26 124.4 230 41.7
SalBow2G0143 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.4e-26 124.0 108 63.0
BcaC01g04006 Brassica carinata HOM05D003885 ORTHO05D004623 5.2e-26 122.1 69 87.0
SHI27704 Sapria himalayana HOM05D003885 ORTHO05D004623 6.8e-26 121.7 211 39.3
SalBow2G2880 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.2e-25 120.9 108 62.0
Cre24.g755447 Chlamydomonas reinhardtii HOM05D003885 ORTHO05D004623 1.5e-25 120.6 236 44.1
CSS0021051 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 2.0e-25 120.2 143 50.3
Actinidia10568 Actinidia chinensis HOM05D003885 ORTHO05D004623 5.8e-25 118.6 132 51.5
CSS0032461 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 7.5e-25 118.2 185 42.7
SalBow2G2704 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.7e-24 117.1 108 60.2
TPR.G37597 Trifolium pratense HOM05D003885 ORTHO05D004623 1.7e-24 117.1 139 51.8
SalBow8G5188 Salvia bowleyana HOM05D003885 ORTHO05D004623 4.1e-23 112.5 60 86.7
RcHm_v2.0_Chr1g0318721 Rosa chinensis HOM05D003885 ORTHO05D004623 2.7e-22 109.8 126 54.0
Zm00001eb157240 Zea mays HOM05D003885 ORTHO05D004623 7.8e-22 108.2 70 75.7
C05p54720 Brassica napus HOM05D003885 ORTHO05D004623 1.9e-20 103.6 67 79.1
COL.COLO4_09698 Corchorus olitorius HOM05D003885 ORTHO05D004623 7.3e-20 101.7 70 72.9
BcaB04g21002 Brassica carinata HOM05D003885 ORTHO05D004623 2.1e-19 100.1 61 80.3
MCO14G027 Micromonas commoda HOM05D003885 ORTHO05D004623 4.4e-17 92.4 73 63.0
ATR0733G138 Amborella trichopoda HOM05D003885 ORTHO05D004623 3.8e-16 89.4 44 95.5
PRCOL_00003569 Prasinoderma coloniale HOM05D003885 ORTHO05D004623 4.9e-16 89.0 214 37.4
RcHm_v2.0_Chr3g0468911 Rosa chinensis HOM05D003885 ORTHO05D004623 8.4e-16 88.2 209 33.5
PSO384G2596 Papaver somniferum HOM05D003885 ORTHO05D004623 1.4e-07 60.8 43 62.8
Haze_27574 Corylus avellana HOM05D003885 ORTHO05D164292 9.3e-07 58.2 49 57.1


User provided reference genes

Program Settings