Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000151g0200 Nicotiana tabacum HOM05D005914 ORTHO05D007361 1.3e-221 772.7 382 100.0
Nitab4.5_0001669g0040 Nicotiana tabacum HOM05D005914 ORTHO05D007361 2.7e-198 695.3 382 90.8
Solyc08g067070.3 Solanum lycopersicum HOM05D005914 ORTHO05D007361 1.7e-189 666.0 382 86.6
Sopen08g021020 Solanum pennellii HOM05D005914 ORTHO05D007361 7.3e-188 660.6 382 86.4
CAN.G98.27 Capsicum annuum HOM05D005914 ORTHO05D007361 2.8e-187 658.7 380 86.1
Peaxi162Scf00341g00624 Petunia axillaris HOM05D005914 ORTHO05D007361 7.3e-164 580.9 309 90.9
Migut.E01476 Erythranthe guttata HOM05D005914 ORTHO05D007361 1.3e-139 500.4 387 65.1
SGA_v2.0_scaffold4G02186 Striga asiatica HOM05D005914 ORTHO05D007361 1.3e-139 500.4 374 66.6
Cc11_g01820 Coffea canephora HOM05D005914 ORTHO05D007361 1.1e-138 497.3 401 64.6
Haze_21570 Corylus avellana HOM05D005914 ORTHO05D007361 4.0e-138 495.4 395 65.6
QL02p022744 Quercus lobata HOM05D005914 ORTHO05D007361 2.0e-137 493.0 385 67.0
CSS0046358 Camellia sinensis var. sinensis HOM05D005914 ORTHO05D007361 4.5e-137 491.9 381 65.9
Thecc.09G149100 Theobroma cacao HOM05D005914 ORTHO05D007361 1.0e-136 490.7 388 64.9
Actinidia22373 Actinidia chinensis HOM05D005914 ORTHO05D007361 1.3e-136 490.3 381 65.6
TAR625G1283 Trochodendron aralioides HOM05D005914 ORTHO05D007361 5.0e-136 488.4 385 64.7
Cfa013180 Carpinus fangiana HOM05D005914 ORTHO05D007361 8.4e-136 487.6 395 64.8
Gohir.A08G236800 Gossypium hirsutum HOM05D005914 ORTHO05D007361 1.4e-135 486.9 391 62.4
GSVIVG01035808001 Vitis vinifera HOM05D005914 ORTHO05D007361 1.4e-135 486.9 372 66.7
Gorai.004G274400 Gossypium raimondii HOM05D005914 ORTHO05D007361 3.2e-135 485.7 388 62.6
THA.LOC104799221 Tarenaya hassleriana HOM05D005914 ORTHO05D007361 4.2e-135 485.3 380 66.1
Rhsim02G0194500 Rhododendron simsii HOM05D005914 ORTHO05D007361 1.2e-134 483.8 381 65.4
HanXRQChr13g0402741 Helianthus annuus HOM05D005914 ORTHO05D007361 2.7e-134 482.6 380 63.7
Atru.chr7.2376 Acer truncatum HOM05D005914 ORTHO05D007361 3.5e-134 482.3 383 64.5
C07p42340 Brassica napus HOM05D005914 ORTHO05D007361 3.0e-133 479.2 379 65.2
TWI63G0300 Tripterygium wilfordii HOM05D005914 ORTHO05D007361 6.7e-133 478.0 383 64.0
Ciclev10008576m.g Citrus clementina HOM05D005914 ORTHO05D007361 1.1e-132 477.2 378 64.6
FvH4_2g29650 Fragaria vesca HOM05D005914 ORTHO05D007361 2.5e-132 476.1 388 63.1
CANSAT80G0109 Cannabis sativa HOM05D005914 ORTHO05D007361 3.3e-132 475.7 381 64.0
Medtr2g009140 Medicago truncatula HOM05D005914 ORTHO05D007361 9.7e-132 474.2 384 63.5
FAN24G3193 Fragaria x ananassa HOM05D005914 ORTHO05D007361 1.3e-131 473.8 388 62.9
RcHm_v2.0_Chr6g0298621 Rosa chinensis HOM05D005914 ORTHO05D007361 1.3e-131 473.8 390 63.6
Eucgr.C01789 Eucalyptus grandis HOM05D005914 ORTHO05D007361 1.6e-131 473.4 388 63.4
Psat1g215880 Pisum sativum HOM05D005914 ORTHO05D007361 3.7e-131 472.2 384 63.3
CANSAT80G2406 Cannabis sativa HOM05D005914 ORTHO05D007361 4.8e-131 471.9 381 63.8
Lj6g0019162 Lotus japonicus HOM05D005914 ORTHO05D007361 4.8e-131 471.9 381 63.8
Glyma.15G054900 Glycine max HOM05D005914 ORTHO05D007361 6.3e-131 471.5 393 62.1
Lalb_Chr20g0122961 Lupinus albus HOM05D005914 ORTHO05D007361 2.4e-130 469.5 370 65.7
PGR142G2371 Punica granatum HOM05D005914 ORTHO05D007361 2.4e-130 469.5 382 64.1
CiPaw.07G220900 Carya illinoinensis HOM05D005914 ORTHO05D007361 3.1e-130 469.2 388 62.9
A06p36180 Brassica napus HOM05D005914 ORTHO05D007361 4.1e-130 468.8 370 65.7
BraA06t26540Z Brassica rapa HOM05D005914 ORTHO05D007361 4.1e-130 468.8 370 65.7
MD15G1120500 Malus domestica HOM05D005914 ORTHO05D007361 4.1e-130 468.8 384 63.3
Thhalv10004397m.g Eutrema salsugineum HOM05D005914 ORTHO05D007361 5.3e-130 468.4 376 65.7
Ca_00145_v3 Cicer arietinum L. HOM05D005914 ORTHO05D007361 1.5e-129 466.8 389 62.2
AL6G37280 Arabidopsis lyrata HOM05D005914 ORTHO05D007361 4.5e-129 465.3 377 64.5
arahy.Tifrunner.gnm1.ann1.J9LH1L Arachis hypogaea HOM05D005914 ORTHO05D007361 5.9e-129 464.9 387 62.3
Sabra06G0196100 Salix brachista HOM05D005914 ORTHO05D007361 5.9e-129 464.9 384 62.2
ECA233G4604 Erigeron canadensis HOM05D005914 ORTHO05D007361 1.0e-128 464.2 363 65.3
Lsat_1_v5_gn_6_22181 Lactuca sativa HOM05D005914 ORTHO05D007361 1.3e-128 463.8 361 64.3
Sp2g22050 Schrenkiella parvula HOM05D005914 ORTHO05D007361 1.3e-128 463.8 376 64.1
Aqoxy7G02060 Aquilegia oxysepala HOM05D005914 ORTHO05D007361 1.7e-128 463.4 391 60.4
Potri.006G250800 Populus trichocarpa HOM05D005914 ORTHO05D007361 1.7e-128 463.4 383 63.4
Carub.0006s2334 Capsella rubella HOM05D005914 ORTHO05D007361 7.2e-127 458.0 376 63.8
AT5G25480 Arabidopsis thaliana HOM05D005914 ORTHO05D007361 9.4e-127 457.6 375 62.9
VMungo0540G0716 Vigna mungo HOM05D005914 ORTHO05D007361 1.2e-126 457.2 385 62.1
Aa31LG11G4850 Aethionema arabicum HOM05D005914 ORTHO05D007361 3.6e-126 455.7 376 62.8
CDE04G0852 Ceratophyllum demersum HOM05D005914 ORTHO05D007361 1.4e-125 453.8 393 57.3
arahy.Tifrunner.gnm1.ann1.T9E77A Arachis hypogaea HOM05D005914 ORTHO05D007361 2.3e-125 453.0 385 61.3
MELO3C011235.2 Cucumis melo HOM05D005914 ORTHO05D007361 5.7e-124 448.4 384 60.9
ClCG08G013130 Citrullus lanatus HOM05D005914 ORTHO05D007361 7.4e-124 448.0 379 62.3
PSO170G3156 Papaver somniferum HOM05D005914 ORTHO05D007361 1.3e-123 447.2 387 59.7
HPP92_012620 Vanilla planifolia HOM05D005914 ORTHO05D007361 2.2e-123 446.4 375 61.3
SalBow2G3472 Salvia bowleyana HOM05D005914 ORTHO05D007361 4.8e-123 445.3 374 59.9
unitig_747.g21653 Utricularia gibba HOM05D005914 ORTHO05D007361 4.1e-122 442.2 373 60.9
Nn2g11936 Nelumbo nucifera HOM05D005914 ORTHO05D007361 9.1e-122 441.0 360 62.5
EL10Ac2g02591 Beta vulgaris HOM05D005914 ORTHO05D007361 3.4e-121 439.1 379 60.2
Duzib150G0329 Durio zibethinus HOM05D005914 ORTHO05D007361 5.9e-121 438.3 385 60.8
Zm00001eb358040 Zea mays HOM05D005914 ORTHO05D007361 1.1e-119 434.1 368 60.9
DCAR_006234 Daucus carota HOM05D005914 ORTHO05D007361 2.5e-119 433.0 409 57.0
Gohir.D08G257400 Gossypium hirsutum HOM05D005914 ORTHO05D007361 2.3e-117 426.4 388 57.5
Sed0010731 Sechium edule HOM05D005914 ORTHO05D007361 1.1e-114 417.5 359 60.4
arahy.Tifrunner.gnm1.ann1.71PCZ9 Arachis hypogaea HOM05D005914 ORTHO05D007361 5.9e-113 411.8 350 61.1
COL.COLO4_23983 Corchorus olitorius HOM05D005914 ORTHO05D007361 1.3e-112 410.6 393 57.5
BolC7t44763H Brassica oleracea HOM05D005914 ORTHO05D007361 1.1e-111 407.5 311 66.2
TPR.G25250 Trifolium pratense HOM05D005914 ORTHO05D008190 9.4e-111 404.4 342 61.1
Dinv11618 Davidia involucrata HOM05D005914 ORTHO05D007361 1.2e-110 404.1 295 68.8
Manes.16G119400 Manihot esculenta HOM05D005914 ORTHO05D007361 8.2e-107 391.3 331 62.2
Mapoly0011s0185 Marchantia polymorpha HOM05D005914 ORTHO05D007361 3.2e-103 379.4 448 48.7
Prupe.1G473200 Prunus persica HOM05D005914 ORTHO05D007361 8.0e-102 374.8 328 60.1
AUR62024878 Chenopodium quinoa HOM05D005914 ORTHO05D007361 1.0e-101 374.4 367 55.0
ATR0815G040 Amborella trichopoda HOM05D005914 ORTHO05D007361 1.8e-98 363.6 343 56.9
SMO146G0196 Selaginella moellendorffii HOM05D005914 ORTHO05D007361 1.3e-96 357.5 375 50.1
Pp3c12_2410 Physcomitrium patens HOM05D005914 ORTHO05D007361 8.5e-96 354.8 470 44.3
CsaV3_2G031850 Cucumis sativus L. HOM05D005914 ORTHO05D007361 2.3e-93 346.7 389 50.4
PSO455G0041 Papaver somniferum HOM05D005914 ORTHO05D007361 3.8e-88 329.3 278 60.1
AUR62030669 Chenopodium quinoa HOM05D005914 ORTHO05D007361 5.0e-88 328.9 309 56.0
Phvul.006G205000 Phaseolus vulgaris HOM05D005914 ORTHO05D007361 7.0e-82 308.5 299 56.5
CBR_g3173 Chara braunii HOM05D005914 ORTHO05D007361 1.1e-79 301.2 546 37.0
Os01g0612000 Oryza sativa ssp. japonica HOM05D005914 ORTHO05D007361 2.3e-77 293.5 274 57.3
FAN27G2538 Fragaria x ananassa HOM05D005914 ORTHO05D007361 8.9e-77 291.6 378 47.6
CARHR187910 Cardamine hirsuta HOM05D005914 ORTHO05D007361 8.1e-70 268.5 171 73.1
MSTRG.13986 Avicennia marina HOM05D005914 ORTHO05D007361 4.0e-69 266.2 269 54.3
Cpa.g.sc91.41 Carica papaya HOM05D005914 ORTHO05D007361 1.2e-68 264.6 189 69.3
AagrBONN_evm.TU.Sc2ySwM_228.810 Anthoceros agrestis HOM05D005914 ORTHO05D007361 1.5e-68 264.2 189 67.2
Lj7C718G14 Lonicera japonica HOM05D005914 ORTHO05D007361 1.1e-66 258.1 261 55.9
FAN20G2480 Fragaria x ananassa HOM05D005914 ORTHO05D007361 1.2e-65 254.6 376 42.8
MCO14G456 Micromonas commoda HOM05D005914 ORTHO05D007361 1.2e-65 254.6 389 39.8
MD08G1143700 Malus domestica HOM05D005914 ORTHO05D007361 3.5e-65 253.1 281 52.7
MBI04_g29855_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 8.6e-64 248.4 236 56.8
Ah.12g063960 Amaranthus hybridus HOM05D005914 ORTHO05D007361 3.6e-62 243.0 150 77.3
Nitab4.5_0003498g0080 Nicotiana tabacum HOM05D005914 ORTHO05D007361 4.7e-62 242.7 324 49.7
CAN.G374.12 Capsicum annuum HOM05D005914 ORTHO05D007361 6.8e-61 238.8 288 49.7
PRCOL_00003212 Prasinoderma coloniale HOM05D005914 ORTHO05D007361 6.8e-61 238.8 420 35.2
RcHm_v2.0_Chr1g0355831 Rosa chinensis HOM05D005914 ORTHO05D007361 8.1e-54 215.3 253 50.2
Hma1.2p1_0000F.1_g000780 Hydrangea macrophylla HOM05D005914 ORTHO05D007361 1.6e-46 191.0 225 51.6
Glyma.08G177800 Glycine max HOM05D005914 ORTHO05D007361 1.7e-43 181.0 196 50.5
MD15G1439700 Malus domestica HOM05D005914 ORTHO05D007361 4.2e-42 176.4 403 35.5
SEGI_35502 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 3.5e-41 173.3 111 73.9
MBI04_g46184_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 5.1e-40 169.5 250 42.4
MCO11G560 Micromonas commoda HOM05D005914 ORTHO05D007361 1.9e-39 167.5 390 33.3
PGR031G2948 Punica granatum HOM05D005914 ORTHO05D007361 7.4e-31 139.0 82 78.0
Sc09g0008460 Simmondsia chinensis HOM05D005914 ORTHO05D007361 6.2e-30 136.0 141 49.6
Cre12.g484600 Chlamydomonas reinhardtii HOM05D005914 ORTHO05D007361 2.4e-29 134.0 175 40.6
Oeu033137.1 Olea europaea HOM05D005914 ORTHO05D007361 4.5e-28 129.8 84 73.8
Sc09g0008440 Simmondsia chinensis HOM05D005914 ORTHO05D007361 1.6e-25 121.3 83 67.5
Sc09g0008580 Simmondsia chinensis HOM05D005914 ORTHO05D007361 1.8e-24 117.9 80 70.0
Sc09g0008450 Simmondsia chinensis HOM05D005914 ORTHO05D007361 9.3e-18 95.5 82 61.0
Aqoxy7G02061 Aquilegia oxysepala HOM05D005914 ORTHO05D007361 3.5e-17 93.6 54 74.1
Sc09g0008540 Simmondsia chinensis HOM05D002899 ORTHO05D003850 8.7e-16 89.0 58 72.4
SEGI_16557 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 4.3e-15 86.7 66 60.6
TPR.G22731 Trifolium pratense HOM05D005914 ORTHO05D007361 2.8e-14 84.0 45 82.2
MBI04_g10409_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 3.7e-14 83.6 50 74.0
MBI04_g46185_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 3.7e-14 83.6 50 74.0
SEGI_14251 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 4.5e-12 76.6 43 79.1
Ah.12g063950 Amaranthus hybridus HOM05D005914 ORTHO05D007361 1.2e-09 68.6 120 35.8
MD08G1144900 Malus domestica HOM05D005914 ORTHO05D007361 3.6e-09 67.0 87 41.4
Sc09g0008600 Simmondsia chinensis HOM05D005914 ORTHO05D007361 2.0e-07 61.2 43 69.8
Glyma.08G177700 Glycine max HOM05D005914 ORTHO05D007361 2.8e-06 57.4 28 89.3


User provided reference genes

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