Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000115g0060 Nicotiana tabacum HOM05D005740 ORTHO05D007085 5.1e-161 571.2 338 100.0
Nitab4.5_0002895g0020 Nicotiana tabacum HOM05D005740 ORTHO05D007085 4.4e-152 541.6 341 85.3
Solyc06g073090.3 Solanum lycopersicum HOM05D005740 ORTHO05D007085 2.1e-130 469.5 344 73.8
Sopen06g029440 Solanum pennellii HOM05D005740 ORTHO05D007085 3.0e-129 465.7 345 73.3
PGSC0003DMG400027021 Solanum tuberosum HOM05D005740 ORTHO05D007085 4.0e-129 465.3 345 73.3
Peaxi162Scf00618g00020 Petunia axillaris HOM05D005740 ORTHO05D007085 4.1e-110 402.1 338 67.5
SalBow6G1442 Salvia bowleyana HOM05D005740 ORTHO05D007085 6.8e-105 384.8 259 76.1
MSTRG.26978 Avicennia marina HOM05D005740 ORTHO05D007085 3.2e-102 375.9 259 74.1
ClCG02G000010 Citrullus lanatus HOM05D005740 ORTHO05D007085 1.8e-97 360.1 264 71.6
Nn3g18795 Nelumbo nucifera HOM05D005740 ORTHO05D007085 1.8e-97 360.1 256 73.8
GSVIVG01038643001 Vitis vinifera HOM05D005740 ORTHO05D007085 5.2e-97 358.6 231 78.4
PGR042G0341 Punica granatum HOM05D005740 ORTHO05D007085 1.2e-96 357.5 263 71.9
CsaV3_2G019690 Cucumis sativus L. HOM05D005740 ORTHO05D007085 2.0e-96 356.7 265 70.6
Thecc.03G208700 Theobroma cacao HOM05D005740 ORTHO05D007085 3.4e-96 355.9 266 70.3
Manes.05G197600 Manihot esculenta HOM05D005740 ORTHO05D007085 7.6e-96 354.8 264 70.5
Sed0000166 Sechium edule HOM05D005740 ORTHO05D007085 9.9e-96 354.4 336 59.2
COL.COLO4_14370 Corchorus olitorius HOM05D005740 ORTHO05D007085 2.2e-95 353.2 260 71.2
HanXRQChr04g0105951 Helianthus annuus HOM05D005740 ORTHO05D007085 2.9e-95 352.8 263 70.3
Gohir.D08G116100 Gossypium hirsutum HOM05D005740 ORTHO05D007085 6.4e-95 351.7 249 71.5
Lsat_1_v5_gn_9_50040 Lactuca sativa HOM05D005740 ORTHO05D007085 1.4e-94 350.5 268 69.0
Eucgr.A01406 Eucalyptus grandis HOM05D005740 ORTHO05D007085 1.9e-94 350.1 268 69.8
Ciclev10021260m.g Citrus clementina HOM05D005740 ORTHO05D007085 3.2e-94 349.4 234 75.6
Duzib205G0029 Durio zibethinus HOM05D005740 ORTHO05D007085 3.2e-94 349.4 266 69.5
Gorai.004G125000 Gossypium raimondii HOM05D005740 ORTHO05D007085 4.1e-94 349.0 245 71.4
THA.LOC104798985 Tarenaya hassleriana HOM05D005740 ORTHO05D007085 7.1e-94 348.2 239 74.9
CARHR188930 Cardamine hirsuta HOM05D005740 ORTHO05D007085 9.2e-94 347.8 234 73.5
Cpa.g.sc3.153 Carica papaya HOM05D005740 ORTHO05D007085 1.2e-93 347.4 261 70.5
DCAR_020372 Daucus carota HOM05D005740 ORTHO05D007085 2.1e-93 346.7 233 73.4
Haze_00297 Corylus avellana HOM05D005740 ORTHO05D007085 3.5e-93 345.9 261 69.7
ECA232G2160 Erigeron canadensis HOM05D005740 ORTHO05D007085 1.0e-92 344.4 235 74.0
CiPaw.05G205100 Carya illinoinensis HOM05D005740 ORTHO05D007085 3.0e-92 342.8 262 68.3
MD07G1298900 Malus domestica HOM05D005740 ORTHO05D007085 3.0e-92 342.8 267 67.8
QL09p007195 Quercus lobata HOM05D005740 ORTHO05D007085 3.0e-92 342.8 260 68.1
Cfa016160 Carpinus fangiana HOM05D005740 ORTHO05D007085 3.9e-92 342.4 261 69.0
CSS0042637 Camellia sinensis var. sinensis HOM05D005740 ORTHO05D007085 6.6e-92 341.7 243 72.0
Glyma.04G228400 Glycine max HOM05D005740 ORTHO05D007085 1.1e-91 340.9 235 76.6
Potri.012G005800 Populus trichocarpa HOM05D005740 ORTHO05D007085 1.5e-91 340.5 233 74.2
CDE05G3242 Ceratophyllum demersum HOM05D005740 ORTHO05D007085 4.3e-91 339.0 264 66.3
CSS0030523 Camellia sinensis var. sinensis HOM05D005740 ORTHO05D007085 5.6e-91 338.6 243 71.6
Migut.F00988 Erythranthe guttata HOM05D005740 ORTHO05D007085 9.6e-91 337.8 253 68.8
Phvul.009G045100 Phaseolus vulgaris HOM05D005740 ORTHO05D007085 1.2e-90 337.4 258 69.4
Actinidia34269 Actinidia chinensis HOM05D005740 ORTHO05D007085 1.6e-90 337.0 267 66.7
Glyma.06G136500 Glycine max HOM05D005740 ORTHO05D007085 2.1e-90 336.7 258 71.3
arahy.Tifrunner.gnm1.ann1.88XX4I Arachis hypogaea HOM05D005740 ORTHO05D007085 2.8e-90 336.3 263 68.8
Migut.F00153 Erythranthe guttata HOM05D005740 ORTHO05D007085 2.8e-90 336.3 263 66.9
arahy.Tifrunner.gnm1.ann1.2GB72X Arachis hypogaea HOM05D005740 ORTHO05D007085 3.6e-90 335.9 263 68.8
CDE02G4511 Ceratophyllum demersum HOM05D005740 ORTHO05D007085 8.1e-90 334.7 240 70.0
Ah.07g204700 Amaranthus hybridus HOM05D005740 ORTHO05D007085 1.1e-89 334.3 236 71.6
unitig_748.g7278 Utricularia gibba HOM05D005740 ORTHO05D007085 1.1e-89 334.3 270 66.7
Thhalv10004495m.g Eutrema salsugineum HOM05D005740 ORTHO05D007085 1.8e-89 333.6 267 64.0
VMungo1309G0132 Vigna mungo HOM05D005740 ORTHO05D007085 2.4e-89 333.2 234 75.2
SGA_v2.0_scaffold18G08464 Striga asiatica HOM05D005740 ORTHO05D007085 3.1e-89 332.8 266 65.8
AUR62035622 Chenopodium quinoa HOM05D005740 ORTHO05D007085 6.9e-89 331.6 237 71.3
Aa31LG11G3730 Aethionema arabicum HOM05D005740 ORTHO05D007085 8.9e-89 331.3 248 69.4
AT5G24490 Arabidopsis thaliana HOM05D005740 ORTHO05D007085 8.9e-89 331.3 232 70.3
Potri.015G002200 Populus trichocarpa HOM05D005740 ORTHO05D007085 1.2e-88 330.9 234 71.8
MBI12_g14495_MAGBIO Magnolia biondii HOM05D005740 ORTHO05D007085 2.6e-88 329.7 272 66.2
AL6G36080 Arabidopsis lyrata HOM05D005740 ORTHO05D007085 3.4e-88 329.3 232 70.3
TAR375G0796 Trochodendron aralioides HOM05D005740 ORTHO05D007085 3.4e-88 329.3 264 67.4
Sp2g22850 Schrenkiella parvula HOM05D005740 ORTHO05D007085 4.4e-88 328.9 233 70.4
EL10Ac3g05180 Beta vulgaris HOM05D005740 ORTHO05D007085 7.6e-88 328.2 231 72.7
C09p07180 Brassica napus HOM05D005740 ORTHO05D007085 7.6e-88 328.2 255 66.3
BraA09t36289Z Brassica rapa HOM05D005740 ORTHO05D007085 9.9e-88 327.8 232 71.1
FAN01G0684 Fragaria x ananassa HOM05D005740 ORTHO05D007085 9.9e-88 327.8 259 66.4
Prupe.2G318800 Prunus persica HOM05D005740 ORTHO05D007085 1.3e-87 327.4 332 56.9
BcaC04g23547 Brassica carinata HOM05D005740 ORTHO05D007085 1.7e-87 327.0 255 65.9
ATR1155G047 Amborella trichopoda HOM05D005740 ORTHO05D007085 2.2e-87 326.6 220 74.5
Carub.0006s2231 Capsella rubella HOM05D005740 ORTHO05D007085 2.2e-87 326.6 232 71.6
A09p06460 Brassica napus HOM05D005740 ORTHO05D007085 4.9e-87 325.5 255 66.7
BcaB04g19814 Brassica carinata HOM05D005740 ORTHO05D007085 8.4e-87 324.7 249 67.1
FAN03G0834 Fragaria x ananassa HOM05D005740 ORTHO05D007085 8.4e-87 324.7 259 65.6
Gohir.A08G104500 Gossypium hirsutum HOM05D005740 ORTHO05D007085 8.4e-87 324.7 249 68.3
Lalb_Chr08g0239611 Lupinus albus HOM05D005740 ORTHO05D007085 8.4e-87 324.7 250 70.0
BcaNung01238 Brassica carinata HOM05D005740 ORTHO05D007085 1.1e-86 324.3 235 69.8
Sabra15G0001400 Salix brachista HOM05D005740 ORTHO05D007085 1.1e-86 324.3 266 64.3
FAN10G2230 Fragaria x ananassa HOM05D005740 ORTHO05D007085 2.4e-86 323.2 259 65.6
PSO782G4352 Papaver somniferum HOM05D005740 ORTHO05D007085 2.4e-86 323.2 258 65.1
TWI23G0506 Tripterygium wilfordii HOM05D005740 ORTHO05D007085 2.4e-86 323.2 239 69.0
CANSAT21G1962 Cannabis sativa HOM05D005740 ORTHO05D007085 5.4e-86 322.0 231 71.4
Ca_16779_v3 Cicer arietinum L. HOM05D005740 ORTHO05D007085 1.2e-85 320.9 245 67.8
Aqoxy7G02158 Aquilegia oxysepala HOM05D005740 ORTHO05D007085 3.5e-85 319.3 249 67.9
PSO063G0961 Papaver somniferum HOM05D005740 ORTHO05D007085 3.5e-85 319.3 258 64.7
Actinidia28282 Actinidia chinensis HOM05D005740 ORTHO05D007085 3.9e-84 315.8 245 68.2
FvH4_7g32900 Fragaria vesca HOM05D005740 ORTHO05D007085 6.6e-84 315.1 259 65.3
RcHm_v2.0_Chr1g0382861 Rosa chinensis HOM05D005740 ORTHO05D007085 1.1e-83 314.3 266 62.4
Lj1g0025829 Lotus japonicus HOM05D005740 ORTHO05D007085 2.5e-83 313.2 251 65.7
Psat5g072000 Pisum sativum HOM05D005740 ORTHO05D007085 4.3e-83 312.4 238 68.1
Sc13g0010280 Simmondsia chinensis HOM05D005740 ORTHO05D007085 3.6e-82 309.3 262 64.9
Medtr3g092720 Medicago truncatula HOM05D005740 ORTHO05D007085 2.4e-81 306.6 235 67.2
HPP92_015050 Vanilla planifolia HOM05D005740 ORTHO05D007085 3.1e-81 306.2 237 66.2
MELO3C023190.2 Cucumis melo HOM05D005740 ORTHO05D007085 6.9e-81 305.1 215 73.0
Rhsim03G0215400 Rhododendron simsii HOM05D005740 ORTHO05D007085 9.9e-80 301.2 267 60.3
CAN.G65.152 Capsicum annuum HOM05D005740 ORTHO05D007085 2.9e-79 299.7 190 82.1
vmacro06441 Vaccinium macrocarpon HOM05D005740 ORTHO05D007085 3.2e-78 296.2 263 59.7
vmacro22782 Vaccinium macrocarpon HOM05D005740 ORTHO05D007085 5.4e-78 295.4 265 59.2
AUR62006005 Chenopodium quinoa HOM05D005740 ORTHO05D007085 7.1e-78 295.0 217 69.1
Aqoxy7G02157 Aquilegia oxysepala HOM05D005740 ORTHO05D007085 3.3e-75 286.2 219 66.2
Lj3A895G46 Lonicera japonica HOM05D005740 ORTHO05D007085 2.8e-74 283.1 235 63.0
Hund09713 Selenicereus undatus HOM05D005740 ORTHO05D007085 5.3e-73 278.9 269 56.9
BcaC09g52277 Brassica carinata HOM05D005740 ORTHO05D007085 9.0e-73 278.1 227 63.9
Os03g0856500 Oryza sativa ssp. japonica HOM05D005740 ORTHO05D007085 5.5e-70 268.9 259 55.2
Zm00001eb064950 Zea mays HOM05D005740 ORTHO05D007085 3.5e-69 266.2 256 55.5
TPR.G33623 Trifolium pratense HOM05D005740 ORTHO05D007085 1.5e-67 260.8 213 64.3
C01p22900 Brassica napus HOM05D005740 ORTHO05D007085 1.8e-65 253.8 227 60.4
A06p35310 Brassica napus HOM05D005740 ORTHO05D007085 1.5e-64 250.8 191 66.5
BraA06t26457Z Brassica rapa HOM05D005740 ORTHO05D007085 1.5e-64 250.8 191 66.5
C01p22870 Brassica napus HOM05D005740 ORTHO05D007085 1.0e-63 248.1 227 58.6
AagrBONN_evm.TU.Sc2ySwM_362.2025 Anthoceros agrestis HOM05D005740 ORTHO05D007085 2.2e-63 246.9 217 58.5
BcaC09g52279 Brassica carinata HOM05D005740 ORTHO05D007085 2.2e-63 246.9 197 65.0
Dinv29211 Davidia involucrata HOM05D005740 ORTHO05D007085 1.4e-62 244.2 179 71.5
Mapoly0136s0019 Marchantia polymorpha HOM05D005740 ORTHO05D007085 1.4e-62 244.2 250 54.8
Atru.chr12.2428 Acer truncatum HOM05D005740 ORTHO05D007085 7.1e-62 241.9 213 62.4
CBR_g44535 Chara braunii HOM05D005740 ORTHO05D007085 3.5e-61 239.6 219 56.2
SMO145G0182 Selaginella moellendorffii HOM05D005740 ORTHO05D007085 6.7e-60 235.3 217 56.2
Actinidia08698 Actinidia chinensis HOM05D005740 ORTHO05D007085 9.7e-59 231.5 181 66.3
Pp3c21_1350 Physcomitrium patens HOM05D005740 ORTHO05D007085 2.8e-58 229.9 216 54.6
Pp3c18_22260 Physcomitrium patens HOM05D005740 ORTHO05D007085 6.3e-58 228.8 256 50.4
C01p22930 Brassica napus HOM05D005740 ORTHO05D007085 2.7e-53 213.4 203 56.2
BcaC09g49688 Brassica carinata HOM05D005740 ORTHO05D007085 1.9e-51 207.2 215 55.3
FAN10G1912 Fragaria x ananassa HOM05D005740 ORTHO05D007085 6.3e-50 202.2 160 66.2
Potri.012G026375 Populus trichocarpa HOM05D005740 ORTHO05D007085 2.5e-46 190.3 173 57.8
MCO12G039 Micromonas commoda HOM05D005740 ORTHO05D007085 5.7e-35 152.5 210 43.3
Cre05.g237450 Chlamydomonas reinhardtii HOM05D005740 ORTHO05D007085 1.1e-33 148.3 214 39.7
Potri.012G009001 Populus trichocarpa HOM05D005740 ORTHO05D007085 2.5e-30 137.1 124 58.9
Potri.011G055100 Populus trichocarpa HOM05D005740 ORTHO05D007085 6.1e-29 132.5 192 43.2
C01p22950 Brassica napus HOM05D005740 ORTHO05D007085 6.3e-26 122.5 109 59.6
PRCOL_00006097 Prasinoderma coloniale HOM05D005740 ORTHO05D007085 4.5e-24 116.3 215 31.2
CAN.G65.153 Capsicum annuum HOM05D000273 ORTHO05D000198 1.7e-23 114.4 64 84.4
BolC1t02230H Brassica oleracea HOM05D005740 ORTHO05D007085 2.8e-18 97.1 62 72.6
Potri.011G054700 Populus trichocarpa HOM05D005740 ORTHO05D007085 6.5e-15 85.9 88 50.0
C01p22940 Brassica napus HOM05D005740 ORTHO05D007085 2.8e-13 80.5 47 76.6
Sabra12G0002000 Salix brachista HOM05D000053 ORTHO05D000035 3.6e-13 80.1 81 58.0
Sabra12G0002700 Salix brachista HOM05D005740 ORTHO05D000035 8.0e-13 79.0 77 58.4
MBI08_g17822_MAGBIO Magnolia biondii HOM05D005740 ORTHO05D007085 1.4e-12 78.2 52 73.1
Sabra12G0007800 Salix brachista HOM05D000053 ORTHO05D000035 2.2e-10 70.9 48 75.0
Sabra12G0002900 Salix brachista HOM05D005740 ORTHO05D007085 2.4e-09 67.4 73 53.4
Sabra12G0002200 Salix brachista HOM05D005740 ORTHO05D007085 5.4e-09 66.2 70 54.3
C01p22960 Brassica napus HOM05D017401 ORTHO05D020044 2.0e-08 64.3 36 80.6
Pp3c3_26240 Physcomitrium patens HOM05D005740 ORTHO05D007085 6.6e-07 59.3 50 52.0


User provided reference genes

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