Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000069g0100 Nicotiana tabacum HOM05D003829 ORTHO05D004943 3.0e-128 461.8 228 100.0
Nitab4.5_0006274g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 5.6e-127 457.6 228 99.1
Peaxi162Scf00153g00217 Petunia axillaris HOM05D003829 ORTHO05D004943 1.3e-115 419.9 228 89.9
Sopen01g003830 Solanum pennellii HOM05D003829 ORTHO05D004943 3.4e-108 395.2 256 78.5
CAN.G282.43 Capsicum annuum HOM05D003829 ORTHO05D004943 4.2e-106 388.3 256 76.6
Solyc01g008310.4 Solanum lycopersicum HOM05D003829 ORTHO05D004943 1.8e-101 372.9 207 88.4
CSS0022273 Camellia sinensis var. sinensis HOM05D003829 ORTHO05D004943 1.2e-92 343.6 257 68.1
Actinidia35063 Actinidia chinensis HOM05D003829 ORTHO05D004943 4.9e-91 338.2 257 66.9
Actinidia18960 Actinidia chinensis HOM05D003829 ORTHO05D004943 5.5e-90 334.7 257 67.7
Cc00_g04570 Coffea canephora HOM05D003829 ORTHO05D004943 1.2e-89 333.6 257 65.8
HanXRQChr03g0078721 Helianthus annuus HOM05D003829 ORTHO05D004943 2.7e-89 332.4 257 65.8
Atru.chr10.875 Acer truncatum HOM05D003829 ORTHO05D004943 3.5e-89 332.0 256 65.6
PGR119G2172 Punica granatum HOM05D003829 ORTHO05D004943 1.3e-88 330.1 257 66.1
SalBow6G2606 Salvia bowleyana HOM05D003829 ORTHO05D004943 1.3e-88 330.1 256 65.2
MSTRG.22458 Avicennia marina HOM05D003829 ORTHO05D004943 3.0e-88 328.9 257 65.8
HanXRQChr09g0270121 Helianthus annuus HOM05D003829 ORTHO05D004943 1.1e-87 327.0 257 65.0
SGA_v2.0_scaffold116G32207 Striga asiatica HOM05D003829 ORTHO05D004943 2.5e-87 325.9 257 65.4
Nitab4.5_0001328g0030 Nicotiana tabacum HOM05D003829 ORTHO05D004943 4.3e-87 325.1 159 98.7
Eucgr.B02012 Eucalyptus grandis HOM05D003829 ORTHO05D004943 1.6e-86 323.2 256 63.3
Gohir.A12G270300 Gossypium hirsutum HOM05D003829 ORTHO05D004943 4.8e-86 321.6 257 65.8
SGA_v2.0_scaffold127G34045 Striga asiatica HOM05D003829 ORTHO05D004943 6.2e-86 321.2 257 65.0
Ciclev10014690m.g Citrus clementina HOM05D003829 ORTHO05D004943 8.2e-86 320.9 256 63.3
Rhsim09G0091000 Rhododendron simsii HOM05D003829 ORTHO05D004943 1.1e-85 320.5 300 57.3
CsaV3_1G003150 Cucumis sativus L. HOM05D003829 ORTHO05D004943 2.4e-85 319.3 257 64.6
Gohir.D12G270700 Gossypium hirsutum HOM05D003829 ORTHO05D004943 2.4e-85 319.3 257 65.8
Gorai.008G291100 Gossypium raimondii HOM05D003829 ORTHO05D004943 2.4e-85 319.3 257 65.8
Sed0025371 Sechium edule HOM05D003829 ORTHO05D004943 2.4e-85 319.3 257 64.6
GSVIVG01008188001 Vitis vinifera HOM05D003829 ORTHO05D004943 2.4e-85 319.3 257 63.4
Thecc.03G060100 Theobroma cacao HOM05D003829 ORTHO05D004943 3.1e-85 318.9 257 65.4
TAR622G1091 Trochodendron aralioides HOM05D003829 ORTHO05D004943 4.0e-85 318.5 257 64.2
Nn6g34733 Nelumbo nucifera HOM05D003829 ORTHO05D004943 6.9e-85 317.8 256 65.2
ClCG06G015260 Citrullus lanatus HOM05D003829 ORTHO05D004943 1.2e-84 317.0 257 64.6
Nn3g17616 Nelumbo nucifera HOM05D003829 ORTHO05D004943 7.6e-84 314.3 257 64.2
Hma1.2p1_0744F.1_g211650 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 1.0e-83 313.9 257 63.0
Sc12g0007010 Simmondsia chinensis HOM05D003829 ORTHO05D004943 1.3e-83 313.5 257 62.6
Potri.018G070200 Populus trichocarpa HOM05D003829 ORTHO05D004943 1.7e-83 313.2 257 62.6
Dinv38617 Davidia involucrata HOM05D003829 ORTHO05D004943 3.8e-83 312.0 208 73.1
Lj4C813G7 Lonicera japonica HOM05D003829 ORTHO05D004943 4.9e-83 311.6 208 74.0
ECA240G3266 Erigeron canadensis HOM05D003829 ORTHO05D003544 1.1e-82 310.5 256 63.3
Hund27361 Selenicereus undatus HOM05D003829 ORTHO05D004943 1.1e-82 310.5 257 63.0
Ah.03g138770 Amaranthus hybridus HOM05D003829 ORTHO05D004943 1.9e-82 309.7 257 61.9
Manes.06G055300 Manihot esculenta HOM05D003829 ORTHO05D004943 3.2e-82 308.9 257 63.0
Potri.013G068100 Populus trichocarpa HOM05D003829 ORTHO05D004943 3.2e-82 308.9 257 61.1
Sp6g28120 Schrenkiella parvula HOM05D003829 ORTHO05D004943 3.2e-82 308.9 255 60.4
VMungo1215G2863 Vigna mungo HOM05D003829 ORTHO05D004943 4.2e-82 308.5 267 60.3
Medtr5g077610 Medicago truncatula HOM05D003829 ORTHO05D004943 5.5e-82 308.1 267 61.0
CANSAT80G2907 Cannabis sativa HOM05D003829 ORTHO05D004943 7.1e-82 307.8 257 63.8
THA.LOC104820955 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 7.1e-82 307.8 254 62.2
Migut.L00155 Erythranthe guttata HOM05D003829 ORTHO05D004943 9.3e-82 307.4 257 61.5
DCAR_011621 Daucus carota HOM05D003829 ORTHO05D004943 1.2e-81 307.0 257 62.6
Migut.N03353 Erythranthe guttata HOM05D003829 ORTHO05D004943 2.1e-81 306.2 257 61.5
Medtr4g112680 Medicago truncatula HOM05D003829 ORTHO05D004943 2.7e-81 305.8 267 60.3
THA.LOC104806554 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 2.7e-81 305.8 255 62.0
arahy.Tifrunner.gnm1.ann1.03AHKF Arachis hypogaea HOM05D003829 ORTHO05D004943 3.5e-81 305.4 266 59.8
arahy.Tifrunner.gnm1.ann1.WM1R7K Arachis hypogaea HOM05D003829 ORTHO05D004943 3.5e-81 305.4 266 59.8
Lalb_Chr12g0197451 Lupinus albus HOM05D003829 ORTHO05D004943 6.1e-81 304.7 267 58.4
Glyma.17G083700 Glycine max HOM05D003829 ORTHO05D004943 1.0e-80 303.9 267 59.6
Glyma.05G016400 Glycine max HOM05D003829 ORTHO05D004943 1.3e-80 303.5 267 59.6
Phvul.003G180700 Phaseolus vulgaris HOM05D003829 ORTHO05D004943 1.3e-80 303.5 267 59.6
Lj4g0017423 Lotus japonicus HOM05D003829 ORTHO05D004943 1.8e-80 303.1 266 59.8
AUR62014243 Chenopodium quinoa HOM05D003829 ORTHO05D004943 5.1e-80 301.6 257 59.9
RcHm_v2.0_Chr7g0184111 Rosa chinensis HOM05D003829 ORTHO05D004943 5.1e-80 301.6 261 59.0
Psat4g043920 Pisum sativum HOM05D003829 ORTHO05D004943 8.7e-80 300.8 267 59.2
Atru.chr11.247 Acer truncatum HOM05D003829 ORTHO05D004943 1.5e-79 300.1 211 70.1
AUR62008644 Chenopodium quinoa HOM05D003829 ORTHO05D004943 1.5e-79 300.1 257 59.9
Prupe.5G212200 Prunus persica HOM05D003829 ORTHO05D004943 4.3e-79 298.5 256 61.3
EL10Ac6g14132 Beta vulgaris HOM05D003829 ORTHO05D004943 5.7e-79 298.1 284 55.3
Prupe.5G041000 Prunus persica HOM05D003829 ORTHO05D004943 9.7e-79 297.4 256 60.5
C09p61050 Brassica napus HOM05D003829 ORTHO05D004943 1.6e-78 296.6 255 59.6
BolC9t58950H Brassica oleracea HOM05D003829 ORTHO05D004943 1.6e-78 296.6 255 59.6
CDE10G0520 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 1.6e-78 296.6 260 58.5
FAN13G0156 Fragaria x ananassa HOM05D003829 ORTHO05D004943 3.7e-78 295.4 257 58.4
A10p23060 Brassica napus HOM05D003829 ORTHO05D004943 4.8e-78 295.0 255 59.2
BraA10t44375Z Brassica rapa HOM05D003829 ORTHO05D004943 4.8e-78 295.0 255 59.2
FvH4_5g13020 Fragaria vesca HOM05D003829 ORTHO05D004943 6.3e-78 294.7 257 58.4
FAN08G2534 Fragaria x ananassa HOM05D003829 ORTHO05D004943 6.3e-78 294.7 257 58.4
FAN18G1085 Fragaria x ananassa HOM05D003829 ORTHO05D004943 6.3e-78 294.7 257 58.4
ATR0789G018 Amborella trichopoda HOM05D003829 ORTHO05D004943 3.1e-77 292.4 259 58.7
TWI73G0611 Tripterygium wilfordii HOM05D003829 ORTHO05D004943 3.1e-77 292.4 256 58.2
Sabra13G0059400 Salix brachista HOM05D003829 ORTHO05D004943 5.3e-77 291.6 295 53.9
AL2G32240 Arabidopsis lyrata HOM05D003829 ORTHO05D004943 1.2e-76 290.4 255 56.5
BcaB08g36877 Brassica carinata HOM05D003829 ORTHO05D004943 4.5e-76 288.5 261 58.2
CDE10G0816 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 5.9e-76 288.1 252 59.1
MD06G1208000 Malus domestica HOM05D003829 ORTHO05D004943 7.7e-76 287.7 262 59.5
Carub.0002s1941 Capsella rubella HOM05D003829 ORTHO05D004943 1.0e-75 287.3 255 56.5
Cpa.g.sc271.5 Carica papaya HOM05D003829 ORTHO05D004943 2.5e-74 282.7 223 64.1
MD14G1218400 Malus domestica HOM05D003829 ORTHO05D004943 2.5e-74 282.7 262 58.4
Ca_21737_v3 Cicer arietinum L. HOM05D003829 ORTHO05D004943 7.2e-74 281.2 218 65.6
unitig_60.g25860 Utricularia gibba HOM05D003829 ORTHO05D004943 1.2e-73 280.4 269 54.6
AT1G72550 Arabidopsis thaliana HOM05D003829 ORTHO05D004943 1.6e-73 280.0 262 54.2
unitig_0.g846 Utricularia gibba HOM05D003829 ORTHO05D004943 1.6e-73 280.0 255 56.5
TPR.G23867 Trifolium pratense HOM05D003829 ORTHO05D004943 2.7e-73 279.3 268 57.1
Rhsim01G0138800 Rhododendron simsii HOM05D003829 ORTHO05D004943 6.1e-73 278.1 401 43.1
CARHR065490 Cardamine hirsuta HOM05D003829 ORTHO05D004943 1.3e-70 270.4 266 52.6
Duzib084G0834 Durio zibethinus HOM05D003829 ORTHO05D004943 6.3e-70 268.1 211 64.9
QL10p021913 Quercus lobata HOM05D003829 ORTHO05D004943 3.1e-69 265.8 268 54.1
CiPaw.04G139300 Carya illinoinensis HOM05D003829 ORTHO05D004943 6.9e-69 264.6 268 55.2
Migut.M00517 Erythranthe guttata HOM05D003829 ORTHO05D004943 3.4e-68 262.3 257 55.6
Migut.O00831 Erythranthe guttata HOM05D003829 ORTHO05D004943 2.2e-67 259.6 257 55.3
Thhalv10007156m.g Eutrema salsugineum HOM05D003829 ORTHO05D004943 2.2e-67 259.6 255 51.4
vmacro21052 Vaccinium macrocarpon HOM05D003829 ORTHO05D004943 8.5e-67 257.7 394 41.4
COL.COLO4_28877 Corchorus olitorius HOM05D003829 ORTHO05D004943 1.1e-66 257.3 249 57.4
CiPaw.15G121900 Carya illinoinensis HOM05D003829 ORTHO05D004943 1.9e-66 256.5 268 53.4
MELO3C017266.2 Cucumis melo HOM05D003829 ORTHO05D004943 2.1e-65 253.1 177 71.2
Aa31LG11G13610 Aethionema arabicum HOM05D003829 ORTHO05D004943 7.9e-65 251.1 281 49.5
Hma1.2p1_0340F.1_g130210 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 1.4e-64 250.4 256 53.9
Mapoly0013s0023 Marchantia polymorpha HOM05D003829 ORTHO05D004943 1.4e-64 250.4 260 52.7
SMO351G0192 Selaginella moellendorffii HOM05D003829 ORTHO05D004943 3.0e-64 249.2 239 51.9
Haze_18554 Corylus avellana HOM05D003829 ORTHO05D004943 9.7e-63 244.2 220 60.9
Pp3c22_15340 Physcomitrium patens HOM05D003829 ORTHO05D004943 1.7e-62 243.4 248 51.2
Aqoxy1G02793 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 2.4e-61 239.6 260 52.3
CBR_g49053 Chara braunii HOM05D003829 ORTHO05D004943 3.1e-61 239.2 258 50.0
Os05g0558900 Oryza sativa ssp. japonica HOM05D003829 ORTHO05D004943 4.1e-61 238.8 257 52.5
HPP92_013143 Vanilla planifolia HOM05D003829 ORTHO05D004943 4.1e-61 238.8 256 51.6
PSO384G2719 Papaver somniferum HOM05D003829 ORTHO05D004943 4.5e-60 235.3 264 50.0
PSO676G0009 Papaver somniferum HOM05D003829 ORTHO05D004943 7.7e-60 234.6 266 49.2
HPP92_013183 Vanilla planifolia HOM05D003829 ORTHO05D004943 7.7e-60 234.6 255 51.0
BcaC04g18917 Brassica carinata HOM05D003829 ORTHO05D004943 1.0e-59 234.2 255 50.6
PSO339G3234 Papaver somniferum HOM05D003829 ORTHO05D004943 2.2e-59 233.0 267 48.7
Pp3c19_13120 Physcomitrium patens HOM05D003829 ORTHO05D004943 3.8e-59 232.3 251 49.4
Aqoxy6G02137 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 3.6e-57 225.7 260 50.0
COL.COLO4_30269 Corchorus olitorius HOM05D003829 ORTHO05D004943 3.9e-56 222.2 202 60.9
HPP92_013145 Vanilla planifolia HOM05D003829 ORTHO05D004943 2.8e-54 216.1 253 48.6
Haze_25314 Corylus avellana HOM05D003829 ORTHO05D004943 3.7e-54 215.7 187 63.6
Lsat_1_v5_gn_1_11920 Lactuca sativa HOM05D003829 ORTHO05D004943 3.1e-53 212.6 228 51.8
Cfa021591 Carpinus fangiana HOM05D003829 ORTHO05D004943 5.3e-53 211.8 218 56.4
PRCOL_00001438 Prasinoderma coloniale HOM05D003829 ORTHO05D004943 1.5e-50 203.8 259 43.6
Oeu037756.2 Olea europaea HOM05D003829 ORTHO05D004943 7.2e-50 201.4 150 64.7
MCO09G827 Micromonas commoda HOM05D003829 ORTHO05D004943 9.4e-50 201.1 243 44.4
AagrBONN_evm.TU.Sc2ySwM_199.43 Anthoceros agrestis HOM05D003829 ORTHO05D004943 6.8e-48 194.9 165 59.4
Cre13.g603900 Chlamydomonas reinhardtii HOM05D003829 ORTHO05D004943 7.5e-47 191.4 249 43.0
Zm00001eb267900 Zea mays HOM05D003829 ORTHO05D004943 2.2e-46 189.9 259 46.3
Haze_26625 Corylus avellana HOM05D003829 ORTHO05D004943 1.8e-45 186.8 262 41.2
C02p08100 Brassica napus HOM05D003829 ORTHO05D004943 2.4e-45 186.4 200 50.0
BcaC03g18463 Brassica carinata HOM05D003829 ORTHO05D004943 1.5e-42 177.2 201 46.8
SEGI_10599 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 3.6e-41 172.6 144 61.1
BolC2t06732H Brassica oleracea HOM05D003829 ORTHO05D004943 1.0e-40 171.0 201 46.3
Cfa026018 Carpinus fangiana HOM05D003829 ORTHO05D004943 2.0e-39 166.8 180 45.6
SEGI_27435 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 1.3e-35 154.1 140 54.3
HPP92_013186 Vanilla planifolia HOM05D003829 ORTHO05D004943 2.9e-35 152.9 184 48.9
HPP92_013146 Vanilla planifolia HOM05D003829 ORTHO05D004943 5.2e-32 142.1 162 48.1
SEGI_36904 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 1.1e-29 134.4 119 63.0
Oeu029991.1 Olea europaea HOM05D003829 ORTHO05D004943 9.2e-29 131.3 114 59.6
A03p07510 Brassica napus HOM05D003829 ORTHO05D004943 6.6e-27 125.2 118 54.2
BraA03t10079Z Brassica rapa HOM05D000168 ORTHO05D000811 1.5e-26 124.0 118 53.4
Glyma.05G172902 Glycine max HOM05D003829 ORTHO05D004943 3.3e-26 122.9 119 55.5
C03p08720 Brassica napus HOM05D003829 ORTHO05D004943 5.6e-26 122.1 115 53.9
BolC3t13370H Brassica oleracea HOM05D000168 ORTHO05D000811 1.2e-25 120.9 115 53.0
SEGI_39885 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 6.1e-25 118.6 118 53.4
HanXRQChr05g0129701 Helianthus annuus HOM05D003829 ORTHO05D044979 1.4e-24 117.5 85 64.7
Nitab4.5_0000138g0100 Nicotiana tabacum HOM05D003829 ORTHO05D284283 9.8e-23 111.3 162 43.8
CiPaw.16G081500 Carya illinoinensis HOM05D003829 ORTHO05D004943 2.3e-19 100.1 90 60.0
MELO3C029751.2 Cucumis melo HOM05D003829 ORTHO05D044979 4.0e-16 89.4 86 58.1
HPP92_012679 Vanilla planifolia HOM05D000282 ORTHO05D004791 1.2e-15 87.8 67 62.7
Lsat_1_v5_gn_3_100941 Lactuca sativa HOM05D002028 ORTHO05D022527 1.1e-13 81.3 91 48.4
AagrBONN_evm.TU.Sc2ySwM_368.2791 Anthoceros agrestis HOM05D003829 ORTHO05D004943 1.4e-08 64.3 86 40.7


User provided reference genes

Program Settings