Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000068g0470 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.3e-127 458.0 227 100.0
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.5e-59 231.1 159 76.1
Nitab4.5_0007595g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.3e-54 217.2 144 78.5
Nitab4.5_0004792g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.0e-51 205.3 173 65.9
Nitab4.5_0000229g0050 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.7e-46 190.3 126 77.8
Nitab4.5_0000002g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.2e-42 176.0 143 66.4
Nitab4.5_0000817g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.0e-40 169.1 158 61.4
Nitab4.5_0001076g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.0e-40 169.1 158 60.1
Nitab4.5_0003879g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.9e-35 152.9 173 48.0
Peaxi162Scf00485g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 2.9e-35 152.9 147 51.0
Nitab4.5_0009529g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.5e-34 150.6 122 70.5
Nitab4.5_0000074g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.9e-34 150.2 147 57.8
Nitab4.5_0007579g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.1e-33 145.2 126 62.7
Nitab4.5_0002430g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.0e-32 142.5 162 52.5
Nitab4.5_0009966g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.2e-32 142.1 157 52.9
Solyc07g039615.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 2.2e-30 136.7 146 50.0
Peaxi162Scf00002g05111 Petunia axillaris HOM05D002954 ORTHO05D003353 7.7e-28 128.3 146 46.6
Nitab4.5_0008563g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 7.2e-26 121.7 65 86.2
Psat3g063200 Pisum sativum HOM05D002954 ORTHO05D003353 1.6e-25 120.6 143 45.5
Nitab4.5_0002473g0090 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.8e-24 114.8 116 55.2
Phvul.L001985 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.5e-23 114.0 136 42.6
Nitab4.5_0000712g0160 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.4e-23 112.8 90 66.7
Phvul.L002237 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 9.8e-23 111.3 136 40.4
Phvul.003G087300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.3e-22 110.9 140 41.4
Psat5g237440 Pisum sativum HOM05D002954 ORTHO05D003353 2.8e-22 109.8 143 44.1
Nitab4.5_0002227g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.8e-21 107.1 63 87.3
Nitab4.5_0006180g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.1e-21 104.8 146 37.7
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 1.6e-20 104.0 136 39.7
arahy.Tifrunner.gnm1.ann1.9YTX13 Arachis hypogaea HOM05D002954 ORTHO05D003353 1.3e-19 100.9 136 39.0
arahy.Tifrunner.gnm1.ann1.NE3TTV Arachis hypogaea HOM05D002954 ORTHO05D003353 1.7e-19 100.5 136 38.2
VMungo0647G1703 Vigna mungo HOM05D002954 ORTHO05D000002 6.6e-19 98.6 163 34.4
Nitab4.5_0006326g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.6e-19 98.2 136 44.9
Nitab4.5_0004985g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.5e-18 97.4 157 36.3
Lj1g0008605 Lotus japonicus HOM05D002954 ORTHO05D003353 5.6e-18 95.5 143 36.4
Sopen11g015860 Solanum pennellii HOM05D002954 ORTHO05D003353 7.2e-18 95.1 190 32.6
Phvul.011G145200 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 9.5e-18 94.7 152 36.8
Lj4g0009760 Lotus japonicus HOM05D002954 ORTHO05D003353 1.6e-17 94.0 136 34.6
Lj5g0000508 Lotus japonicus HOM05D002954 ORTHO05D003353 1.6e-17 94.0 136 34.6
Lj1g0003177 Lotus japonicus HOM05D002954 ORTHO05D003353 2.8e-17 93.2 142 35.9
arahy.Tifrunner.gnm1.ann1.5TT13I Arachis hypogaea HOM05D002954 ORTHO05D003353 3.6e-17 92.8 136 36.0
Peaxi162Scf00109g00210 Petunia axillaris HOM05D002954 ORTHO05D003353 6.8e-16 88.6 141 37.6
Peaxi162Scf00818g00410 Petunia axillaris HOM05D002954 ORTHO05D003353 6.8e-16 88.6 141 37.6
Sopen01g012110 Solanum pennellii HOM05D002954 ORTHO05D003353 8.9e-16 88.2 64 57.8
Lj6g0018229 Lotus japonicus HOM05D002954 ORTHO05D003353 2.0e-15 87.0 136 35.3
Solyc11g044937.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 3.4e-15 86.3 140 36.4
arahy.Tifrunner.gnm1.ann1.C5M9FF Arachis hypogaea HOM05D002954 ORTHO05D000385 7.5e-15 85.1 190 28.9
Peaxi162Scf00318g00919 Petunia axillaris HOM05D002954 ORTHO05D003353 7.5e-15 85.1 141 36.2
Phvul.001G154901 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 7.5e-15 85.1 137 32.1
Peaxi162Scf00603g00522 Petunia axillaris HOM05D002954 ORTHO05D003353 9.8e-15 84.7 141 36.9
Glyma.20G055700 Glycine max HOM05D002954 ORTHO05D003353 1.7e-14 84.0 149 30.9
Nitab4.5_0002100g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.9e-14 83.2 134 34.3
Nitab4.5_0000140g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.4e-13 80.9 65 67.7
Peaxi162Scf00624g00076 Petunia axillaris HOM05D002954 ORTHO05D003353 5.4e-13 79.0 168 31.0
Lj2g0001970 Lotus japonicus HOM05D003938 ORTHO05D004759 7.0e-13 78.6 157 31.8
Phvul.008G149000 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 7.0e-13 78.6 135 31.1
Psat3g100040 Pisum sativum HOM05D002954 ORTHO05D003353 7.0e-13 78.6 141 31.9
arahy.Tifrunner.gnm1.ann1.HJ32VC Arachis hypogaea HOM05D002954 ORTHO05D003353 1.6e-12 77.4 125 32.0
Nitab4.5_0000416g0230 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.7e-12 76.6 54 70.4
arahy.Tifrunner.gnm1.ann1.2IZ9JW Arachis hypogaea HOM05D002954 ORTHO05D003353 1.3e-11 74.3 143 33.6
Nitab4.5_0006547g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.9e-11 72.8 194 27.8
Peaxi162Scf00005g00443 Petunia axillaris HOM05D002954 ORTHO05D003353 3.9e-11 72.8 119 35.3
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 3.9e-11 72.8 141 29.8
arahy.Tifrunner.gnm1.ann1.H1PTY0 Arachis hypogaea HOM05D002954 ORTHO05D010308 5.0e-11 72.4 143 33.6
Nitab4.5_0006077g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.6e-11 71.6 156 27.6
arahy.Tifrunner.gnm1.ann1.DXNF3X Arachis hypogaea HOM05D002954 ORTHO05D003353 1.5e-10 70.9 145 29.0
Peaxi162Scf00016g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 1.9e-10 70.5 165 27.3
Peaxi162Scf00173g00019 Petunia axillaris HOM05D002954 ORTHO05D003353 1.9e-10 70.5 165 27.3
Lj2g0004380 Lotus japonicus HOM05D005022 ORTHO05D002200 3.3e-10 69.7 122 35.2
Nitab4.5_0001199g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.3e-10 69.7 151 28.5
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 3.3e-10 69.7 146 31.5
Peaxi162Scf00006g00207 Petunia axillaris HOM05D002954 ORTHO05D003353 4.3e-10 69.3 181 26.5
Psat0s2772g0080 Pisum sativum HOM05D002954 ORTHO05D003353 4.3e-10 69.3 60 58.3
arahy.Tifrunner.gnm1.ann1.35BP8C Arachis hypogaea HOM05D009662 ORTHO05D003353 5.6e-10 68.9 141 31.2
Nitab4.5_0004695g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.6e-10 68.9 156 28.2
Nitab4.5_0007957g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.6e-10 68.9 195 28.2
Peaxi162Scf00093g00015 Petunia axillaris HOM05D002954 ORTHO05D010308 5.6e-10 68.9 165 26.7
Psat0s797g0080 Pisum sativum HOM05D002954 ORTHO05D010767 9.5e-10 68.2 183 29.0
Nitab4.5_0005139g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-09 67.8 153 29.4
Nitab4.5_0028686g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.6e-09 67.4 197 28.9
Psat2g134520 Pisum sativum HOM05D002954 ORTHO05D003353 1.6e-09 67.4 105 32.4
Nitab4.5_0003520g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.6e-09 66.2 153 30.1
Nitab4.5_0000188g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.7e-09 65.9 197 27.4
Nitab4.5_0004672g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.2e-09 65.5 90 43.3
Nitab4.5_0008635g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.2e-09 65.5 139 29.5
A09p31580 Brassica napus HOM05D008309 ORTHO05D010308 1.0e-08 64.7 140 29.3
BraA10t44443Z Brassica rapa HOM05D008309 ORTHO05D010308 1.0e-08 64.7 140 29.3
Nitab4.5_0000358g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.0e-08 64.7 62 43.5
Nitab4.5_0003353g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.0e-08 64.7 30 96.7
Nitab4.5_0010215g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.0e-08 64.7 51 54.9
Nitab4.5_0001346g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.8e-08 63.9 137 29.9
Phvul.008G147600 Phaseolus vulgaris HOM05D002954 ORTHO05D000385 2.3e-08 63.5 94 34.0
Nitab4.5_0006167g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.1e-08 63.2 30 96.7
VMungo0464G1180 Vigna mungo HOM05D003555 ORTHO05D004542 4.0e-08 62.8 200 24.5
Peaxi162Scf00914g00054 Petunia axillaris HOM05D002954 ORTHO05D003353 6.8e-08 62.0 141 28.4
Nitab4.5_0000781g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-07 61.2 142 27.5
Nitab4.5_0002394g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-07 60.8 197 28.4
Psat2g020120 Pisum sativum HOM05D002954 ORTHO05D000062 2.0e-07 60.5 54 44.4
Nitab4.5_0000138g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.6e-07 60.1 64 42.2
arahy.Tifrunner.gnm1.ann1.QKP2RW Arachis hypogaea HOM05D002954 ORTHO05D003353 3.4e-07 59.7 136 27.9
Lj6g0018783 Lotus japonicus HOM05D002954 ORTHO05D000385 4.4e-07 59.3 60 41.7
arahy.Tifrunner.gnm1.ann1.N8CY10 Arachis hypogaea HOM05D009662 ORTHO05D003353 5.8e-07 58.9 59 40.7
Nitab4.5_0008492g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.8e-07 58.9 133 29.3
Psat5g178040 Pisum sativum HOM05D002954 ORTHO05D003353 5.8e-07 58.9 53 43.4
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.8e-07 58.2 137 29.2
Nitab4.5_0007501g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.8e-07 58.2 44 70.5
arahy.Tifrunner.gnm1.ann1.0Q01G3 Arachis hypogaea HOM05D002954 ORTHO05D003353 1.3e-06 57.8 67 46.3
Nitab4.5_0000062g0240 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.3e-06 57.8 55 45.5
Nitab4.5_0001404g0070 Nicotiana tabacum HOM05D002954 ORTHO05D015034 1.3e-06 57.8 58 43.1
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 2.2e-06 57.0 137 27.0
Lalb_Chr21g0312571 Lupinus albus HOM05D009128 ORTHO05D011389 2.2e-06 57.0 140 26.4
arahy.Tifrunner.gnm1.ann1.HMQ64L Arachis hypogaea HOM05D002954 ORTHO05D003353 2.9e-06 56.6 52 40.4
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 2.9e-06 56.6 146 28.1
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 2.9e-06 56.6 137 27.0
Lalb_Chr22g0358521 Lupinus albus HOM05D002954 ORTHO05D003353 2.9e-06 56.6 125 28.8
Phvul.010G077600 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 2.9e-06 56.6 97 37.1
AT3G30200 Arabidopsis thaliana HOM05D008309 ORTHO05D010308 3.7e-06 56.2 145 25.5
arahy.Tifrunner.gnm1.ann1.VWW6CB Arachis hypogaea HOM05D002954 ORTHO05D003353 3.7e-06 56.2 63 46.0
VMungo0720G1591 Vigna mungo HOM05D002954 ORTHO05D000385 3.7e-06 56.2 79 36.7
arahy.Tifrunner.gnm1.ann1.04XLZZ Arachis hypogaea HOM05D002954 ORTHO05D003353 4.9e-06 55.8 49 42.9
Nitab4.5_0010441g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.9e-06 55.8 117 28.2
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 6.4e-06 55.5 136 27.9
Nitab4.5_0003082g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.4e-06 55.5 117 26.5
AT1G40087 Arabidopsis thaliana HOM05D008309 ORTHO05D010308 8.3e-06 55.1 145 26.2
Nitab4.5_0000499g0080 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.3e-06 55.1 29 82.8
Sopen09g020910 Solanum pennellii HOM05D002954 ORTHO05D003353 8.3e-06 55.1 60 45.0


User provided reference genes

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