Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000062g0540 Nicotiana tabacum HOM05D002009 ORTHO05D005728 1.4e-63 246.1 123 100.0
Nitab4.5_0003690g0060 Nicotiana tabacum HOM05D002009 ORTHO05D005728 1.0e-42 176.8 92 95.7
Peaxi162Scf00153g00816 Petunia axillaris HOM05D002009 ORTHO05D005728 1.3e-42 176.4 92 94.6
MSTRG.23471 Avicennia marina HOM05D002009 ORTHO05D005728 1.8e-42 176.0 92 93.5
Rhsim10G0131800 Rhododendron simsii HOM05D002009 ORTHO05D005728 1.8e-42 176.0 92 93.5
TAR376G0128 Trochodendron aralioides HOM05D002009 ORTHO05D005728 3.0e-42 175.3 92 93.5
CiPaw.03G119300 Carya illinoinensis HOM05D002009 ORTHO05D005728 6.7e-42 174.1 92 92.4
Glyma.06G155300 Glycine max HOM05D002009 ORTHO05D005728 6.7e-42 174.1 92 92.4
Lj2C610T3 Lonicera japonica HOM05D002009 ORTHO05D005728 6.7e-42 174.1 93 91.4
Actinidia06606 Actinidia chinensis HOM05D002009 ORTHO05D005728 1.5e-41 172.9 92 92.4
CSS0020069 Camellia sinensis var. sinensis HOM05D002009 ORTHO05D005728 2.5e-41 172.2 92 92.4
CSS0020764 Camellia sinensis var. sinensis HOM05D002009 ORTHO05D005728 2.5e-41 172.2 92 92.4
Dinv34360 Davidia involucrata HOM05D002009 ORTHO05D005728 2.5e-41 172.2 92 92.4
Lalb_Chr23g0272641 Lupinus albus HOM05D002009 ORTHO05D005728 2.5e-41 172.2 92 90.2
Prupe.4G273600 Prunus persica HOM05D002009 ORTHO05D005728 2.5e-41 172.2 92 92.4
Eucgr.I00173 Eucalyptus grandis HOM05D002009 ORTHO05D005728 3.3e-41 171.8 92 92.4
Ca_16976_v3 Cicer arietinum L. HOM05D002009 ORTHO05D005728 4.3e-41 171.4 92 91.3
Psat5g060760 Pisum sativum HOM05D002009 ORTHO05D005728 4.3e-41 171.4 92 91.3
THA.LOC104818425 Tarenaya hassleriana HOM05D002009 ORTHO05D005728 4.3e-41 171.4 92 91.3
CANSAT01G2904 Cannabis sativa HOM05D002009 ORTHO05D005728 5.6e-41 171.0 92 91.3
Cpa.g.sc42.181 Carica papaya HOM05D002009 ORTHO05D005728 5.6e-41 171.0 93 90.3
Duzib268G1329 Durio zibethinus HOM05D002009 ORTHO05D005728 5.6e-41 171.0 92 91.3
MBI03_g39989_MAGBIO Magnolia biondii HOM05D002009 ORTHO05D005728 5.6e-41 171.0 92 89.1
Manes.12G077400 Manihot esculenta HOM05D002009 ORTHO05D005728 5.6e-41 171.0 92 91.3
Sc16g0009480 Simmondsia chinensis HOM05D002009 ORTHO05D005728 5.6e-41 171.0 89 94.4
Thecc.07G044100 Theobroma cacao HOM05D002009 ORTHO05D005728 5.6e-41 171.0 92 91.3
GSVIVG01026455001 Vitis vinifera HOM05D002009 ORTHO05D005728 5.6e-41 171.0 92 91.3
Atru.chr4.962 Acer truncatum HOM05D002009 ORTHO05D005728 7.4e-41 170.6 92 91.3
Cfa002919 Carpinus fangiana HOM05D002009 ORTHO05D005728 7.4e-41 170.6 92 90.2
Cc07_g18900 Coffea canephora HOM05D002009 ORTHO05D005728 7.4e-41 170.6 92 89.1
Migut.H00864 Erythranthe guttata HOM05D002009 ORTHO05D005728 7.4e-41 170.6 92 91.3
QL10p042354 Quercus lobata HOM05D002009 ORTHO05D005728 7.4e-41 170.6 92 90.2
arahy.Tifrunner.gnm1.ann1.7D624Q Arachis hypogaea HOM05D002009 ORTHO05D005728 9.6e-41 170.2 92 90.2
arahy.Tifrunner.gnm1.ann1.BG9WT0 Arachis hypogaea HOM05D002009 ORTHO05D005728 9.6e-41 170.2 92 90.2
Glyma.04G210700 Glycine max HOM05D002009 ORTHO05D005728 9.6e-41 170.2 92 90.2
MD00G1053300 Malus domestica HOM05D002009 ORTHO05D005728 9.6e-41 170.2 92 90.2
Medtr3g096525 Medicago truncatula HOM05D002009 ORTHO05D005728 9.6e-41 170.2 92 90.2
Sp2g27020 Schrenkiella parvula HOM05D002009 ORTHO05D005728 1.3e-40 169.9 92 89.1
Ciclev10000086m.g Citrus clementina HOM05D002009 ORTHO05D005728 1.6e-40 169.5 92 90.2
ClCG01G015100 Citrullus lanatus HOM05D002009 ORTHO05D005728 2.1e-40 169.1 139 66.9
Gohir.A13G139100 Gossypium hirsutum HOM05D002009 ORTHO05D005728 2.1e-40 169.1 92 90.2
Gohir.D13G143900 Gossypium hirsutum HOM05D002009 ORTHO05D005728 2.1e-40 169.1 92 90.2
Gorai.013G160900 Gossypium raimondii HOM05D002009 ORTHO05D005728 2.1e-40 169.1 92 90.2
SGA_v2.0_scaffold273G46462 Striga asiatica HOM05D002009 ORTHO05D005728 2.1e-40 169.1 92 89.1
Aa31LG1G17940 Aethionema arabicum HOM05D002009 ORTHO05D005728 2.8e-40 168.7 92 88.0
AL8G41220 Arabidopsis lyrata HOM05D002009 ORTHO05D005728 2.8e-40 168.7 92 88.0
AT5G63960 Arabidopsis thaliana HOM05D002009 ORTHO05D005728 2.8e-40 168.7 92 88.0
Carub.0008s2474 Capsella rubella HOM05D002009 ORTHO05D005728 2.8e-40 168.7 92 88.0
CDE06G1389 Ceratophyllum demersum HOM05D002009 ORTHO05D005728 2.8e-40 168.7 92 89.1
AUR62000499 Chenopodium quinoa HOM05D002009 ORTHO05D005728 2.8e-40 168.7 92 88.0
AUR62006845 Chenopodium quinoa HOM05D002009 ORTHO05D005728 2.8e-40 168.7 92 88.0
Thhalv10003565m.g Eutrema salsugineum HOM05D002009 ORTHO05D005728 2.8e-40 168.7 92 88.0
PSO017G4864 Papaver somniferum HOM05D002009 ORTHO05D005728 3.7e-40 168.3 92 89.1
PSO170G4442 Papaver somniferum HOM05D002009 ORTHO05D005728 3.7e-40 168.3 92 89.1
FvH4_1g24660 Fragaria vesca HOM05D002009 ORTHO05D005728 4.8e-40 167.9 92 89.1
FAN19G2450 Fragaria x ananassa HOM05D002009 ORTHO05D005728 4.8e-40 167.9 92 89.1
FAN23G2639 Fragaria x ananassa HOM05D002009 ORTHO05D005728 4.8e-40 167.9 92 89.1
FAN26G3211 Fragaria x ananassa HOM05D002009 ORTHO05D005728 4.8e-40 167.9 92 89.1
FAN28G0184 Fragaria x ananassa HOM05D002009 ORTHO05D005728 4.8e-40 167.9 92 89.1
Sed0004291 Sechium edule HOM05D002009 ORTHO05D005728 4.8e-40 167.9 92 90.2
Hund07251 Selenicereus undatus HOM05D002009 ORTHO05D005728 4.8e-40 167.9 92 88.0
CARHR277870 Cardamine hirsuta HOM05D002009 ORTHO05D005728 6.2e-40 167.5 92 87.0
DCAR_001198 Daucus carota HOM05D002009 ORTHO05D005728 6.2e-40 167.5 92 88.0
HanXRQChr12g0380541 Helianthus annuus HOM05D002009 ORTHO05D005728 6.2e-40 167.5 92 88.0
Phvul.009G155200 Phaseolus vulgaris HOM05D002009 ORTHO05D005728 8.1e-40 167.2 88 92.0
Potri.005G065800 Populus trichocarpa HOM05D002009 ORTHO05D005728 8.1e-40 167.2 92 89.1
Sabra05G0054400 Salix brachista HOM05D002009 ORTHO05D005728 1.1e-39 166.8 92 88.0
Solyc10g081250.3 Solanum lycopersicum HOM05D002009 ORTHO05D005728 1.1e-39 166.8 92 89.1
Aqoxy5G02298 Aquilegia oxysepala HOM05D002009 ORTHO05D005728 1.4e-39 166.4 92 88.0
CsaV3_6G041210 Cucumis sativus L. HOM05D002009 ORTHO05D005728 1.4e-39 166.4 92 88.0
SMO232G0005 Selaginella moellendorffii HOM05D002009 ORTHO05D005728 1.4e-39 166.4 92 87.0
Zm00001eb201340 Zea mays HOM05D002009 ORTHO05D005728 1.4e-39 166.4 92 88.0
Ah.06g190900 Amaranthus hybridus HOM05D002009 ORTHO05D005728 1.8e-39 166.0 92 87.0
AagrBONN_evm.TU.Sc2ySwM_344.4377 Anthoceros agrestis HOM05D002009 ORTHO05D005728 1.8e-39 166.0 92 85.9
Lj1g0002975 Lotus japonicus HOM05D002009 ORTHO05D005728 1.8e-39 166.0 92 87.0
Pp3c27_3350 Physcomitrium patens HOM05D002009 ORTHO05D005728 1.8e-39 166.0 92 87.0
SHI11497 Sapria himalayana HOM05D002009 ORTHO05D005728 1.8e-39 166.0 92 87.0
Sopen10g031750 Solanum pennellii HOM05D002009 ORTHO05D005728 2.4e-39 165.6 92 88.0
MELO3C024596.2 Cucumis melo HOM05D002009 ORTHO05D005728 3.1e-39 165.2 92 88.0
Pp3c6_19160 Physcomitrium patens HOM05D002009 ORTHO05D005728 3.1e-39 165.2 92 85.9
TWI31G0245 Tripterygium wilfordii HOM05D002009 ORTHO05D005728 3.1e-39 165.2 92 87.0
VMungo1309G0642 Vigna mungo HOM05D002009 ORTHO05D005728 3.1e-39 165.2 89 91.0
EL10Ac4g09604 Beta vulgaris HOM05D002009 ORTHO05D005728 4.0e-39 164.9 92 85.9
Mapoly0087s0021 Marchantia polymorpha HOM05D002009 ORTHO05D005728 4.0e-39 164.9 89 86.5
Os11g0186400 Oryza sativa ssp. japonica HOM05D002009 ORTHO05D005728 4.0e-39 164.9 92 85.9
ATR0584G016 Amborella trichopoda HOM05D002009 ORTHO05D005728 5.3e-39 164.5 92 85.9
COL.COLO4_09630 Corchorus olitorius HOM05D002009 ORTHO05D005728 9.0e-39 163.7 92 85.9
RcHm_v2.0_Chr2g0122111 Rosa chinensis HOM05D002009 ORTHO05D005728 9.0e-39 163.7 92 87.0
ECA233G2868 Erigeron canadensis HOM05D002009 ORTHO05D005728 1.2e-38 163.3 92 85.9
Nn033s41620 Nelumbo nucifera HOM05D002009 ORTHO05D005728 2.0e-38 162.5 92 84.8
Nn5g28479 Nelumbo nucifera HOM05D002009 ORTHO05D005728 2.0e-38 162.5 92 84.8
CAN.G128.115 Capsicum annuum HOM05D002009 ORTHO05D005728 4.5e-38 161.4 92 85.9
BolC3t18498H Brassica oleracea HOM05D002009 ORTHO05D005728 7.6e-38 160.6 92 84.8
TPR.G28192 Trifolium pratense HOM05D002009 ORTHO05D005728 1.3e-37 159.8 115 73.0
A06p30580 Brassica napus HOM05D002009 ORTHO05D005728 1.7e-37 159.5 92 83.7
C03p62380 Brassica napus HOM05D002009 ORTHO05D005728 1.7e-37 159.5 92 83.7
BraA06t26010Z Brassica rapa HOM05D002009 ORTHO05D005728 1.7e-37 159.5 92 83.7
Lsat_1_v5_gn_5_68921 Lactuca sativa HOM05D002009 ORTHO05D005728 6.4e-37 157.5 92 84.8
Oeu037837.1 Olea europaea HOM05D002009 ORTHO05D005728 8.4e-37 157.1 105 81.0
Aa31LG3G3040 Aethionema arabicum HOM05D002009 ORTHO05D005728 1.9e-36 156.0 92 80.4
CBR_g38906 Chara braunii HOM05D002009 ORTHO05D005728 1.6e-35 152.9 87 83.9
Phvul.005G019000 Phaseolus vulgaris HOM05D002009 ORTHO05D005728 2.1e-35 152.5 92 80.4
HPP92_005659 Vanilla planifolia HOM05D002009 ORTHO05D005728 6.0e-35 151.0 92 77.2
Haze_25289 Corylus avellana HOM05D002009 ORTHO05D005728 1.1e-31 140.2 92 77.2
Migut.E01506 Erythranthe guttata HOM05D002009 ORTHO05D005728 1.0e-29 133.7 104 66.3
Migut.B00967 Erythranthe guttata HOM05D002009 ORTHO05D005728 4.9e-29 131.3 87 73.6
Cre01.g015250 Chlamydomonas reinhardtii HOM05D002009 ORTHO05D005728 9.3e-28 127.1 89 68.5
Cfa025827 Carpinus fangiana HOM05D002009 ORTHO05D005728 3.9e-26 121.7 88 65.9
Haze_26645 Corylus avellana HOM05D002009 ORTHO05D005728 1.9e-25 119.4 106 61.3
MCO05G447 Micromonas commoda HOM05D002009 ORTHO05D005728 4.3e-25 118.2 90 61.1
PRCOL_00002177 Prasinoderma coloniale HOM05D002009 ORTHO05D005728 2.8e-24 115.5 89 66.3
Oeu058301.1 Olea europaea HOM05D002009 ORTHO05D005728 4.1e-23 111.7 57 91.2
MD07G1029900 Malus domestica HOM05D002009 ORTHO05D005728 8.5e-13 77.4 92 51.1


User provided reference genes

Program Settings