Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000008g0420 Nicotiana tabacum HOM05D007241 ORTHO05D009142 7.7e-189 663.7 342 100.0
Nitab4.5_0007671g0010 Nicotiana tabacum HOM05D007241 ORTHO05D009142 2.7e-178 628.6 342 94.7
Solyc09g011830.4 Solanum lycopersicum HOM05D007241 ORTHO05D009142 6.4e-159 564.3 342 87.4
Sopen09g006650 Solanum pennellii HOM05D007241 ORTHO05D009142 7.0e-158 560.8 342 87.1
PGSC0003DMG400020362 Solanum tuberosum HOM05D007241 ORTHO05D009142 1.5e-155 553.1 342 85.7
Peaxi162Scf00427g00616 Petunia axillaris HOM05D007241 ORTHO05D009142 4.0e-153 545.0 342 84.2
CAN.G1233.2 Capsicum annuum HOM05D007241 ORTHO05D009142 2.7e-149 532.3 342 83.3
Cc06_g01830 Coffea canephora HOM05D007241 ORTHO05D009142 1.2e-112 410.6 345 66.1
Oeu015010.1 Olea europaea HOM05D007241 ORTHO05D009142 1.5e-112 410.2 329 67.5
Hma1.2p1_0671F.1_g200780 Hydrangea macrophylla HOM05D007241 ORTHO05D009142 3.9e-108 395.6 338 64.8
MSTRG.5609 Avicennia marina HOM05D007241 ORTHO05D009142 3.3e-107 392.5 343 62.1
CSS0004399 Camellia sinensis var. sinensis HOM05D007241 ORTHO05D009142 3.3e-107 392.5 350 62.3
Nn2g11326 Nelumbo nucifera HOM05D007241 ORTHO05D009142 1.6e-106 390.2 345 63.5
GSVIVG01034032001 Vitis vinifera HOM05D007241 ORTHO05D009142 1.8e-105 386.7 351 63.5
Migut.J00242 Erythranthe guttata HOM05D007241 ORTHO05D009142 3.1e-105 386.0 344 62.2
TAR633G0637 Trochodendron aralioides HOM05D007241 ORTHO05D009142 4.0e-105 385.6 352 60.2
Thecc.05G024800 Theobroma cacao HOM05D007241 ORTHO05D009142 3.8e-103 379.0 350 59.7
Duzib093G2007 Durio zibethinus HOM05D007241 ORTHO05D009142 8.4e-103 377.9 352 59.9
Cpa.g.sc56.88 Carica papaya HOM05D007241 ORTHO05D009142 7.1e-102 374.8 350 58.3
Eucgr.K03006 Eucalyptus grandis HOM05D007241 ORTHO05D009142 1.2e-101 374.0 355 57.7
Duzib106G0374 Durio zibethinus HOM05D007241 ORTHO05D009142 1.6e-101 373.6 352 59.7
Gorai.012G110300 Gossypium raimondii HOM05D007241 ORTHO05D009142 1.6e-101 373.6 357 60.2
Gohir.D04G127300 Gossypium hirsutum HOM05D007241 ORTHO05D009142 2.7e-101 372.9 364 59.3
PGR004G2498 Punica granatum HOM05D007241 ORTHO05D009142 7.9e-101 371.3 349 57.9
CiPaw.10G153200 Carya illinoinensis HOM05D007241 ORTHO05D009142 1.3e-100 370.5 349 60.2
Aa31LG3G1690 Aethionema arabicum HOM05D007241 ORTHO05D009142 1.3e-98 364.0 343 59.2
MBI14_g28606_MAGBIO Magnolia biondii HOM05D007241 ORTHO05D009142 2.2e-98 363.2 345 58.3
SGA_v2.0_scaffold85G26792 Striga asiatica HOM05D007241 ORTHO05D009142 2.8e-98 362.8 342 59.6
AUR62015997 Chenopodium quinoa HOM05D007241 ORTHO05D009142 6.3e-98 361.7 345 59.1
Carub.0003s0832 Capsella rubella HOM05D007241 ORTHO05D009142 1.4e-97 360.5 344 58.4
SalBow3G1957 Salvia bowleyana HOM05D007241 ORTHO05D009142 2.4e-97 359.8 324 60.5
Dinv35525 Davidia involucrata HOM05D007241 ORTHO05D009142 3.1e-97 359.4 328 61.0
CANSAT35G2041 Cannabis sativa HOM05D007241 ORTHO05D009142 1.2e-96 357.5 339 57.8
Lj3g0002129 Lotus japonicus HOM05D007241 ORTHO05D009142 1.2e-96 357.5 333 59.5
CARHR083550 Cardamine hirsuta HOM05D007241 ORTHO05D009142 1.5e-96 357.1 340 56.8
Haze_20925 Corylus avellana HOM05D007241 ORTHO05D009142 2.0e-96 356.7 347 58.2
Sp3g07590 Schrenkiella parvula HOM05D007241 ORTHO05D009142 2.0e-96 356.7 330 57.3
AL3G20320 Arabidopsis lyrata HOM05D007241 ORTHO05D009142 3.4e-96 355.9 342 57.3
BcaC09g48011 Brassica carinata HOM05D007241 ORTHO05D009142 4.5e-96 355.5 325 58.8
Ah.07g207300 Amaranthus hybridus HOM05D007241 ORTHO05D009142 5.9e-96 355.1 350 58.3
unitig_749.g14176 Utricularia gibba HOM05D007241 ORTHO05D009142 7.6e-96 354.8 344 59.6
BcaC09g48056 Brassica carinata HOM05D007241 ORTHO05D009142 2.2e-95 353.2 344 56.4
Ciclev10012141m.g Citrus clementina HOM05D007241 ORTHO05D009142 2.2e-95 353.2 355 56.9
BraA01t04312Z Brassica rapa HOM05D007241 ORTHO05D009142 6.5e-95 351.7 322 58.7
Prupe.6G268100 Prunus persica HOM05D007241 ORTHO05D009142 6.5e-95 351.7 342 56.7
Atru.chr8.2123 Acer truncatum HOM05D007241 ORTHO05D009142 8.5e-95 351.3 350 54.9
AT3G09210 Arabidopsis thaliana HOM05D007241 ORTHO05D009142 1.1e-94 350.9 303 60.1
Thhalv10021091m.g Eutrema salsugineum HOM05D007241 ORTHO05D009142 4.2e-94 349.0 342 56.1
Sc22g0004510 Simmondsia chinensis HOM05D007241 ORTHO05D009142 4.2e-94 349.0 338 56.8
Aqoxy1G00764 Aquilegia oxysepala HOM05D007241 ORTHO05D009142 7.2e-94 348.2 347 57.1
THA.LOC104823276 Tarenaya hassleriana HOM05D007241 ORTHO05D009142 7.2e-94 348.2 347 55.9
BolC1t05471H Brassica oleracea HOM05D007241 ORTHO05D009142 1.2e-93 347.4 340 55.3
Lalb_Chr13g0291331 Lupinus albus HOM05D007241 ORTHO05D009142 2.7e-93 346.3 344 55.2
Potri.006G094800 Populus trichocarpa HOM05D007241 ORTHO05D009142 1.0e-92 344.4 352 56.2
Psat7g241800 Pisum sativum HOM05D007241 ORTHO05D009142 3.9e-92 342.4 339 53.4
Glyma.01G109100 Glycine max HOM05D007241 ORTHO05D009142 6.7e-92 341.7 348 54.6
Sabra06G0072600 Salix brachista HOM05D007241 ORTHO05D009142 3.3e-91 339.3 347 55.9
Manes.08G083700 Manihot esculenta HOM05D007241 ORTHO05D009142 1.3e-90 337.4 352 55.4
EL10Ac3g05675 Beta vulgaris HOM05D007241 ORTHO05D009142 1.7e-90 337.0 349 56.4
FAN02G0490 Fragaria x ananassa HOM05D007241 ORTHO05D009142 2.2e-90 336.7 343 54.5
RcHm_v2.0_Chr3g0464151 Rosa chinensis HOM05D007241 ORTHO05D009142 2.2e-90 336.7 347 54.5
arahy.Tifrunner.gnm1.ann1.IV4I8P Arachis hypogaea HOM05D007241 ORTHO05D009142 3.7e-90 335.9 298 59.4
MELO3C003216.2 Cucumis melo HOM05D007241 ORTHO05D009142 6.3e-90 335.1 343 53.9
Gohir.A04G087000 Gossypium hirsutum HOM05D007241 ORTHO05D009142 1.1e-89 334.3 351 56.1
FvH4_6g12350 Fragaria vesca HOM05D007241 ORTHO05D009142 2.4e-89 333.2 343 53.9
FAN14G0673 Fragaria x ananassa HOM05D007241 ORTHO05D009142 2.4e-89 333.2 343 53.9
FAN05G2185 Fragaria x ananassa HOM05D007241 ORTHO05D009142 4.1e-89 332.4 345 52.5
vmacro20223 Vaccinium macrocarpon HOM05D007241 ORTHO05D009142 1.5e-88 330.5 349 54.2
DCAR_010398 Daucus carota HOM05D007241 ORTHO05D009142 2.0e-88 330.1 389 48.8
Sed0022131 Sechium edule HOM05D007241 ORTHO05D009142 2.0e-88 330.1 343 52.5
Medtr4g019060 Medicago truncatula HOM05D007241 ORTHO05D009142 7.7e-88 328.2 335 54.6
CsaV3_4G025900 Cucumis sativus L. HOM05D007241 ORTHO05D009142 1.3e-87 327.4 343 52.8
ClCG04G007350 Citrullus lanatus HOM05D007241 ORTHO05D009142 1.9e-86 323.6 354 52.0
Phvul.010G006200 Phaseolus vulgaris HOM05D007241 ORTHO05D009142 1.9e-86 323.6 339 52.5
Ca_20114_v3 Cicer arietinum L. HOM05D007241 ORTHO05D009142 9.4e-86 321.2 393 49.1
Lsat_1_v5_gn_2_72881 Lactuca sativa HOM05D007241 ORTHO05D009142 2.7e-85 319.7 341 50.7
VMungo0331G1333 Vigna mungo HOM05D007241 ORTHO05D009142 7.9e-85 318.2 339 51.9
PSO063G4791 Papaver somniferum HOM05D007241 ORTHO05D009142 1.8e-84 317.0 301 56.8
TWI74G0988 Tripterygium wilfordii HOM05D007241 ORTHO05D009142 3.0e-84 316.2 354 52.3
ATR0618G224 Amborella trichopoda HOM05D007241 ORTHO05D009142 7.4e-83 311.6 346 50.9
HanXRQChr10g0300011 Helianthus annuus HOM05D007241 ORTHO05D009142 1.3e-82 310.8 340 49.4
arahy.Tifrunner.gnm1.ann1.D4R6TJ Arachis hypogaea HOM05D007241 ORTHO05D009142 1.8e-81 307.0 345 51.0
MD04G1143600 Malus domestica HOM05D007241 ORTHO05D009142 1.0e-79 301.2 319 53.3
Hund04733 Selenicereus undatus HOM05D007241 ORTHO05D009142 3.2e-78 296.2 347 51.6
ECA233G2042 Erigeron canadensis HOM05D007241 ORTHO05D009142 5.5e-78 295.4 288 53.5
Actinidia13799 Actinidia chinensis HOM05D007241 ORTHO05D009142 8.0e-77 291.6 325 51.7
Rhsim05G0202600 Rhododendron simsii HOM05D007241 ORTHO05D009142 2.5e-70 270.0 343 50.7
AUR62021204 Chenopodium quinoa HOM05D007241 ORTHO05D009142 3.6e-61 239.6 344 46.5
Os03g0825500 Oryza sativa ssp. japonica HOM05D007241 ORTHO05D009142 1.4e-60 237.7 341 40.2
HPP92_014289 Vanilla planifolia HOM05D007241 ORTHO05D009142 1.7e-58 230.7 248 48.8
CDE04G1578 Ceratophyllum demersum HOM05D007241 ORTHO05D009142 1.7e-55 220.7 220 53.6
arahy.Tifrunner.gnm1.ann1.4L01Q9 Arachis hypogaea HOM05D007241 ORTHO05D009142 4.2e-54 216.1 208 55.3
TPR.G8187 Trifolium pratense HOM05D007241 ORTHO05D009142 1.6e-53 214.2 285 46.0
Zm00001eb063100 Zea mays HOM05D007241 ORTHO05D009142 1.4e-52 211.1 299 41.5
TPR.G40038 Trifolium pratense HOM05D007241 ORTHO05D009142 4.1e-33 146.4 96 69.8
COL.COLO4_14646 Corchorus olitorius HOM05D007241 ORTHO05D009142 9.2e-33 145.2 141 59.6
MD12G1157800 Malus domestica HOM05D007241 ORTHO05D009142 1.6e-29 134.4 247 39.3
Mapoly0003s0142 Marchantia polymorpha HOM05D007241 ORTHO05D009142 1.6e-29 134.4 305 30.5
Lj3A958T74 Lonicera japonica HOM05D007241 ORTHO05D009142 6.8e-28 129.0 141 52.5
Pp3c24_19950 Physcomitrium patens HOM05D007241 ORTHO05D009142 1.3e-26 124.8 303 29.7
Lj3A958T75 Lonicera japonica HOM05D007241 ORTHO05D009142 1.6e-24 117.9 127 50.4
BcaB05g24622 Brassica carinata HOM05D007241 ORTHO05D009142 9.5e-22 108.6 87 59.8
COL.COLO4_14645 Corchorus olitorius HOM05D007241 ORTHO05D009142 3.2e-17 93.6 133 47.4
CBR_g25746 Chara braunii HOM05D000019 ORTHO05D000048 4.2e-17 93.2 305 26.2
SEGI_13087 Sequoiadendron giganteum HOM05D007241 ORTHO05D009142 2.0e-11 74.3 75 48.0
TAR629G1375 Trochodendron aralioides HOM05D007241 ORTHO05D009142 1.9e-09 67.8 58 58.6
SMO164G0023 Selaginella moellendorffii HOM05D007241 ORTHO05D009142 3.3e-06 57.0 330 23.3


User provided reference genes

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