Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000005g0410 Nicotiana tabacum HOM05D005111 ORTHO05D006650 1.0e-117 426.8 221 100.0
Nitab4.5_0000389g0080 Nicotiana tabacum HOM05D005111 ORTHO05D006650 1.4e-98 363.2 184 97.8
Nitab4.5_0000844g0360 Nicotiana tabacum HOM05D005111 ORTHO05D006650 3.6e-86 322.0 183 85.8
PGSC0003DMG400007321 Solanum tuberosum HOM05D005111 ORTHO05D006650 6.1e-86 321.2 182 85.7
CAN.G809.38 Capsicum annuum HOM05D005111 ORTHO05D006650 1.8e-85 319.7 182 86.3
Nitab4.5_0000632g0170 Nicotiana tabacum HOM05D005111 ORTHO05D006650 2.3e-85 319.3 182 85.2
Peaxi162Scf00036g00163 Petunia axillaris HOM05D005111 ORTHO05D006650 2.3e-85 319.3 182 86.3
Solyc02g081950.4 Solanum lycopersicum HOM05D005111 ORTHO05D006650 2.3e-85 319.3 183 84.7
Sopen02g026580 Solanum pennellii HOM05D005111 ORTHO05D006650 8.7e-85 317.4 182 84.1
TWI56G1475 Tripterygium wilfordii HOM05D005111 ORTHO05D006650 2.9e-80 302.4 182 79.7
Lsat_1_v5_gn_8_69941 Lactuca sativa HOM05D005111 ORTHO05D006650 3.8e-80 302.0 182 79.7
Dinv35035 Davidia involucrata HOM05D005111 ORTHO05D006650 5.0e-80 301.6 182 80.8
ECA246G3776 Erigeron canadensis HOM05D005111 ORTHO05D006650 6.5e-80 301.2 182 80.2
GSVIVG01032518001 Vitis vinifera HOM05D005111 ORTHO05D006650 1.1e-79 300.4 183 79.2
DCAR_013972 Daucus carota HOM05D005111 ORTHO05D006650 2.5e-79 299.3 182 79.7
HanXRQChr15g0474461 Helianthus annuus HOM05D005111 ORTHO05D006650 4.2e-79 298.5 180 80.0
Lj7P412T18 Lonicera japonica HOM05D005111 ORTHO05D006650 4.2e-79 298.5 182 80.8
TWI36G0044 Tripterygium wilfordii HOM05D005111 ORTHO05D006650 9.4e-79 297.4 182 79.1
Hma1.2p1_0697F.1_g204930 Hydrangea macrophylla HOM05D005111 ORTHO05D006650 1.2e-78 297.0 184 78.3
CSS0013590 Camellia sinensis var. sinensis HOM05D005111 ORTHO05D006650 2.1e-78 296.2 182 79.1
Dinv33518 Davidia involucrata HOM05D005111 ORTHO05D006650 2.1e-78 296.2 182 79.7
Oeu047328.1 Olea europaea HOM05D005111 ORTHO05D006650 3.6e-78 295.4 182 79.1
Actinidia28460 Actinidia chinensis HOM05D005111 ORTHO05D006650 4.6e-78 295.0 183 78.7
Actinidia36066 Actinidia chinensis HOM05D005111 ORTHO05D006650 4.6e-78 295.0 183 78.7
CiPaw.04G023100 Carya illinoinensis HOM05D005111 ORTHO05D006650 4.6e-78 295.0 182 79.1
RcHm_v2.0_Chr2g0170641 Rosa chinensis HOM05D005111 ORTHO05D006650 1.4e-77 293.5 182 77.5
Cfa007459 Carpinus fangiana HOM05D005111 ORTHO05D006650 3.0e-77 292.4 182 78.0
MD17G1038600 Malus domestica HOM05D005111 ORTHO05D006650 3.9e-77 292.0 183 76.0
Manes.15G180000 Manihot esculenta HOM05D005111 ORTHO05D006650 5.1e-77 291.6 182 76.9
Cc07_g02510 Coffea canephora HOM05D005111 ORTHO05D006650 8.8e-77 290.8 178 80.3
FAN09G2278 Fragaria x ananassa HOM05D005111 ORTHO05D006650 1.5e-76 290.0 182 76.4
FAN02G1641 Fragaria x ananassa HOM05D005111 ORTHO05D006650 2.0e-76 289.7 182 75.8
FAN05G4920 Fragaria x ananassa HOM05D005111 ORTHO05D006650 2.6e-76 289.3 182 75.8
Prupe.3G280400 Prunus persica HOM05D005111 ORTHO05D006650 2.6e-76 289.3 182 75.8
Haze_14637 Corylus avellana HOM05D005111 ORTHO05D006650 3.3e-76 288.9 178 79.2
MD09G1037200 Malus domestica HOM05D005111 ORTHO05D006650 5.7e-76 288.1 182 75.8
Manes.17G124400 Manihot esculenta HOM05D005111 ORTHO05D006650 7.4e-76 287.7 182 75.3
Rhsim08G0056700 Rhododendron simsii HOM05D005111 ORTHO05D006650 9.7e-76 287.3 193 71.5
CANSAT64G0323 Cannabis sativa HOM05D005111 ORTHO05D006650 2.2e-75 286.2 182 74.7
SalBow1G6258 Salvia bowleyana HOM05D005111 ORTHO05D006650 8.2e-75 284.3 177 76.8
PGR083G2413 Punica granatum HOM05D005111 ORTHO05D006650 1.8e-74 283.1 183 75.4
Nn3g16957 Nelumbo nucifera HOM05D005111 ORTHO05D006650 3.1e-74 282.3 182 73.6
ClCG09G018710 Citrullus lanatus HOM05D005111 ORTHO05D006650 4.1e-74 282.0 182 74.7
ClCG09G018770 Citrullus lanatus HOM05D005111 ORTHO05D006650 4.1e-74 282.0 182 74.7
FvH4_6g50340 Fragaria vesca HOM05D005111 ORTHO05D006650 5.3e-74 281.6 177 76.8
FAN14G5899 Fragaria x ananassa HOM05D005111 ORTHO05D006650 5.3e-74 281.6 177 76.8
Potri.001G350300 Populus trichocarpa HOM05D005111 ORTHO05D006650 9.1e-74 280.8 179 74.9
Atru.chr6.2171 Acer truncatum HOM05D005111 ORTHO05D006650 1.5e-73 280.0 182 74.2
CiPaw.03G035600 Carya illinoinensis HOM05D005111 ORTHO05D006650 2.0e-73 279.6 182 74.2
QL02p077635 Quercus lobata HOM05D005111 ORTHO05D006650 2.6e-73 279.3 182 74.7
Sed0001363 Sechium edule HOM05D005111 ORTHO05D006650 2.6e-73 279.3 182 74.7
AUR62032092 Chenopodium quinoa HOM05D005111 ORTHO05D006650 3.4e-73 278.9 182 72.5
MELO3C021519.2 Cucumis melo HOM05D005111 ORTHO05D006650 4.5e-73 278.5 182 74.2
CsaV3_5G037360 Cucumis sativus L. HOM05D005111 ORTHO05D006650 4.5e-73 278.5 182 74.2
TAR622G0537 Trochodendron aralioides HOM05D005111 ORTHO05D006650 4.5e-73 278.5 182 73.6
MSTRG.3306 Avicennia marina HOM05D005111 ORTHO05D006650 5.9e-73 278.1 178 76.4
Migut.H00147 Erythranthe guttata HOM05D005111 ORTHO05D006650 5.9e-73 278.1 178 74.7
COL.COLO4_32007 Corchorus olitorius HOM05D005111 ORTHO05D006650 7.7e-73 277.7 182 73.1
Sabra16G0229800 Salix brachista HOM05D005111 ORTHO05D006650 1.3e-72 276.9 179 73.7
Nn4g22869 Nelumbo nucifera HOM05D005111 ORTHO05D006650 1.7e-72 276.6 180 72.2
Sed0025070 Sechium edule HOM05D005111 ORTHO05D006650 2.2e-72 276.2 182 73.6
Gorai.006G028500 Gossypium raimondii HOM05D005111 ORTHO05D006650 2.9e-72 275.8 182 71.4
Gohir.D10G087701 Gossypium hirsutum HOM05D005111 ORTHO05D006650 3.8e-72 275.4 182 70.9
Gorai.011G096000 Gossypium raimondii HOM05D005111 ORTHO05D006650 3.8e-72 275.4 182 70.9
MSTRG.15504 Avicennia marina HOM05D005111 ORTHO05D006650 5.0e-72 275.0 178 75.3
Eucgr.J02178 Eucalyptus grandis HOM05D005111 ORTHO05D006650 5.0e-72 275.0 183 70.5
TAR374G1688 Trochodendron aralioides HOM05D005111 ORTHO05D006650 6.5e-72 274.6 184 72.3
Gohir.D09G024300 Gossypium hirsutum HOM05D005111 ORTHO05D006650 8.5e-72 274.2 182 71.4
Thecc.04G004900 Theobroma cacao HOM05D005111 ORTHO05D006650 1.1e-71 273.9 182 72.5
Gohir.A10G101300 Gossypium hirsutum HOM05D005111 ORTHO05D006650 1.4e-71 273.5 182 71.4
Gohir.D04G053100 Gossypium hirsutum HOM05D005111 ORTHO05D006650 1.4e-71 273.5 182 70.9
Gorai.012G059600 Gossypium raimondii HOM05D005111 ORTHO05D006650 1.4e-71 273.5 182 70.9
Gohir.A05G361100 Gossypium hirsutum HOM05D005111 ORTHO05D006650 1.9e-71 273.1 182 70.9
Ah.16g106920 Amaranthus hybridus HOM05D005111 ORTHO05D006650 4.2e-71 271.9 182 69.8
Duzib264G0177 Durio zibethinus HOM05D005111 ORTHO05D006650 5.5e-71 271.6 182 72.0
Hma1.2p1_2931F.1_g330500 Hydrangea macrophylla HOM05D005111 ORTHO05D006650 2.7e-70 269.2 182 70.9
Aa31LG2G4740 Aethionema arabicum HOM05D005111 ORTHO05D006650 3.6e-70 268.9 182 70.3
SalBow7G0796 Salvia bowleyana HOM05D005111 ORTHO05D006650 4.7e-70 268.5 177 73.4
CDE10G0493 Ceratophyllum demersum HOM05D005111 ORTHO05D006650 6.1e-70 268.1 206 63.1
Ciclev10016872m.g Citrus clementina HOM05D005111 ORTHO05D006650 7.9e-70 267.7 182 71.4
Duzib147G1596 Durio zibethinus HOM05D005111 ORTHO05D006650 7.9e-70 267.7 182 69.8
Hma1.2p1_0967F.1_g242385 Hydrangea macrophylla HOM05D005111 ORTHO05D006650 7.9e-70 267.7 182 70.9
Sp2g17070 Schrenkiella parvula HOM05D005111 ORTHO05D006650 7.9e-70 267.7 182 70.3
SGA_v2.0_scaffold205G41716 Striga asiatica HOM05D005111 ORTHO05D006650 1.0e-69 267.3 178 70.2
Aqoxy3G00932 Aquilegia oxysepala HOM05D005111 ORTHO05D006650 1.4e-69 266.9 183 68.9
SGA_v2.0_scaffold30G12485 Striga asiatica HOM05D005111 ORTHO05D006650 3.0e-69 265.8 178 69.7
EL10Ac2g03364 Beta vulgaris HOM05D005111 ORTHO05D006650 6.7e-69 264.6 178 72.5
unitig_744.g24353 Utricularia gibba HOM05D005111 ORTHO05D006650 6.7e-69 264.6 179 70.4
CDE10G0889 Ceratophyllum demersum HOM05D004213 ORTHO05D005091 8.8e-69 264.2 177 70.1
Thhalv10005667m.g Eutrema salsugineum HOM05D005111 ORTHO05D006650 2.0e-68 263.1 182 69.8
THA.LOC104823919 Tarenaya hassleriana HOM05D005111 ORTHO05D006650 2.6e-68 262.7 182 69.8
Potri.017G073800 Populus trichocarpa HOM05D005111 ORTHO05D006650 3.3e-68 262.3 183 71.0
PSO017G5141 Papaver somniferum HOM05D005111 ORTHO05D006650 4.4e-68 261.9 182 68.7
PSO478G1103 Papaver somniferum HOM05D005111 ORTHO05D006650 4.4e-68 261.9 182 68.1
A06p40670 Brassica napus HOM05D005111 ORTHO05D006650 7.4e-68 261.2 182 67.6
BraA06t26987Z Brassica rapa HOM05D005111 ORTHO05D006650 7.4e-68 261.2 182 67.6
AT5G40190 Arabidopsis thaliana HOM05D005111 ORTHO05D006650 9.7e-68 260.8 182 67.0
BcaC06g33750 Brassica carinata HOM05D005111 ORTHO05D006650 1.7e-67 260.0 182 67.6
C07p37330 Brassica napus HOM05D005111 ORTHO05D006650 1.7e-67 260.0 182 67.6
BolC7t44243H Brassica oleracea HOM05D005111 ORTHO05D006650 1.7e-67 260.0 182 67.6
SEGI_23218 Sequoiadendron giganteum HOM05D005111 ORTHO05D006650 2.2e-67 259.6 184 65.8
AL7G49820 Arabidopsis lyrata HOM05D005111 ORTHO05D006650 4.8e-67 258.5 182 66.5
CiPaw.06G158200 Carya illinoinensis HOM05D005111 ORTHO05D006650 6.3e-67 258.1 182 68.1
THA.LOC104805409 Tarenaya hassleriana HOM05D005111 ORTHO05D006650 1.4e-66 256.9 179 68.7
Thhalv10027951m.g Eutrema salsugineum HOM05D005111 ORTHO05D006650 4.1e-66 255.4 180 67.8
Migut.K01364 Erythranthe guttata HOM05D005111 ORTHO05D006650 7.0e-66 254.6 179 68.2
BcaC06g30932 Brassica carinata HOM05D005111 ORTHO05D006650 1.2e-65 253.8 191 66.5
AL5G17640 Arabidopsis lyrata HOM05D005111 ORTHO05D006650 7.7e-65 251.1 181 66.9
Phvul.004G019100 Phaseolus vulgaris HOM05D005111 ORTHO05D006650 1.3e-64 250.4 183 65.0
Carub.0007s3546 Capsella rubella HOM05D005111 ORTHO05D006650 1.7e-64 250.0 182 64.8
Sc20g0002810 Simmondsia chinensis HOM05D005111 ORTHO05D006650 2.2e-64 249.6 170 70.0
CARHR261950 Cardamine hirsuta HOM05D005111 ORTHO05D006650 3.8e-64 248.8 182 64.3
VMungo0464G0112 Vigna mungo HOM05D005111 ORTHO05D006650 3.8e-64 248.8 183 64.5
arahy.Tifrunner.gnm1.ann1.68QD6J Arachis hypogaea HOM05D005111 ORTHO05D006650 6.5e-64 248.1 180 68.3
VMungo0464G1864 Vigna mungo HOM05D005111 ORTHO05D006650 6.5e-64 248.1 183 63.9
AT3G28140 Arabidopsis thaliana HOM05D005111 ORTHO05D006650 8.5e-64 247.7 183 67.2
Glyma.19G011900 Glycine max HOM05D005111 ORTHO05D006650 3.2e-63 245.7 185 64.3
Lj2g0005029 Lotus japonicus HOM05D005111 ORTHO05D006650 4.2e-63 245.4 175 64.6
Aqoxy3G03068 Aquilegia oxysepala HOM05D005111 ORTHO05D006650 9.4e-63 244.2 182 63.7
Glyma.19G012000 Glycine max HOM05D005111 ORTHO05D006650 9.4e-63 244.2 182 65.4
Actinidia33968 Actinidia chinensis HOM05D005111 ORTHO05D000390 3.6e-62 242.3 193 62.7
Phvul.004G019200 Phaseolus vulgaris HOM05D005111 ORTHO05D006650 3.6e-62 242.3 183 62.8
Glyma.13G070800 Glycine max HOM05D005111 ORTHO05D006650 6.7e-61 238.0 180 62.2
Carub.0005s0666 Capsella rubella HOM05D005111 ORTHO05D006650 1.5e-60 236.9 177 66.7
TPR.G2260 Trifolium pratense HOM05D005111 ORTHO05D006650 1.4e-58 230.3 178 62.9
Psat1g060720 Pisum sativum HOM05D005111 ORTHO05D006650 5.3e-58 228.4 177 62.7
Ca_04214_v3 Cicer arietinum L. HOM05D005111 ORTHO05D006650 9.1e-58 227.6 178 61.8
ATR1149G112 Amborella trichopoda HOM05D005111 ORTHO05D006650 4.5e-57 225.3 180 61.1
Lalb_Chr02g0159721 Lupinus albus HOM05D005111 ORTHO05D006650 7.7e-57 224.6 186 58.1
Medtr6g007773 Medicago truncatula HOM05D005111 ORTHO05D006650 7.2e-55 218.0 179 60.9
Sp7g01780 Schrenkiella parvula HOM05D005111 ORTHO05D006650 3.0e-53 212.6 179 60.3
BcaC06g30930 Brassica carinata HOM05D005111 ORTHO05D006650 7.0e-50 201.4 182 57.1
Cpa.g.sc286.5 Carica papaya HOM05D005111 ORTHO05D006650 2.9e-48 196.1 163 61.3
Os09g0375400 Oryza sativa ssp. japonica HOM05D005111 ORTHO05D006650 8.8e-45 184.5 184 53.3
Gohir.A09G025000 Gossypium hirsutum HOM05D005111 ORTHO05D006650 2.2e-43 179.9 121 68.6
FAN09G1763 Fragaria x ananassa HOM05D005111 ORTHO05D006650 9.5e-39 164.5 115 66.1
Zm00001eb098850 Zea mays HOM05D005111 ORTHO05D006650 6.8e-37 158.3 181 47.5
Ah.07g198430 Amaranthus hybridus HOM05D005111 ORTHO05D003582 1.5e-36 157.1 157 51.0
SMO367G0111 Selaginella moellendorffii HOM05D005111 ORTHO05D006650 5.7e-36 155.2 180 42.2
Nn8g40738 Nelumbo nucifera HOM05D005111 ORTHO05D006650 1.4e-26 124.0 75 80.0
Actinidia27813 Actinidia chinensis HOM05D005111 ORTHO05D006650 6.6e-24 115.2 112 55.4
CARHR149780 Cardamine hirsuta HOM05D005111 ORTHO05D006650 4.7e-22 109.0 99 52.5
Ciclev10033710m.g Citrus clementina HOM05D005111 ORTHO05D152558 9.8e-20 101.3 166 32.5
A02p35780 Brassica napus HOM05D005111 ORTHO05D006650 6.4e-11 72.0 71 52.1
BraA02t08578Z Brassica rapa HOM05D000028 ORTHO05D000390 6.4e-11 72.0 105 41.0
BcaC03g17502 Brassica carinata HOM05D005111 ORTHO05D039329 8.4e-11 71.6 51 66.7
BcaC06g33752 Brassica carinata HOM05D005111 ORTHO05D093848 6.2e-06 55.5 38 68.4


User provided reference genes

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