Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00801 Erythranthe guttata HOM05D005962 ORTHO05D007325 8.2e-126 453.8 233 100.0
Migut.I00969 Erythranthe guttata HOM05D005962 ORTHO05D007325 5.4e-117 424.5 223 97.8
Migut.I00971 Erythranthe guttata HOM05D005962 ORTHO05D007325 1.6e-84 316.6 171 96.5
SGA_v2.0_scaffold45G16998 Striga asiatica HOM05D005962 ORTHO05D007325 3.2e-77 292.4 172 84.3
Dinv37956 Davidia involucrata HOM05D005962 ORTHO05D007325 3.5e-76 288.9 173 80.9
MSTRG.11013 Avicennia marina HOM05D005962 ORTHO05D007325 3.0e-75 285.8 171 81.9
SalBow6G5073 Salvia bowleyana HOM05D005962 ORTHO05D007325 5.6e-74 281.6 171 87.7
vmacro18833 Vaccinium macrocarpon HOM05D005962 ORTHO05D007325 7.3e-74 281.2 176 80.1
TAR623G1297 Trochodendron aralioides HOM05D005962 ORTHO05D007325 9.6e-74 280.8 173 78.0
Rhsim08G0229500 Rhododendron simsii HOM05D005962 ORTHO05D007325 1.2e-73 280.4 176 79.0
Hma1.2p1_0764F.1_g214960 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 2.1e-73 279.6 173 78.6
Hma1.2p1_2308F.1_g319480 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 2.1e-73 279.6 173 78.6
Oeu024256.1 Olea europaea HOM05D005962 ORTHO05D007325 8.1e-73 277.7 174 79.3
unitig_32.g10986 Utricularia gibba HOM05D005962 ORTHO05D007325 1.1e-72 277.3 173 80.3
CiPaw.02G144100 Carya illinoinensis HOM05D005962 ORTHO05D007325 1.4e-72 276.9 171 81.9
DCAR_007600 Daucus carota HOM05D005962 ORTHO05D007325 1.4e-72 276.9 173 78.0
Lsat_1_v5_gn_5_181040 Lactuca sativa HOM05D005962 ORTHO05D007325 3.1e-72 275.8 171 78.9
Cc00_g23930 Coffea canephora HOM05D005962 ORTHO05D007325 5.2e-72 275.0 171 78.9
ECA248G1573 Erigeron canadensis HOM05D005962 ORTHO05D007325 6.9e-72 274.6 171 77.8
Nn4g25123 Nelumbo nucifera HOM05D005962 ORTHO05D007325 3.4e-71 272.3 170 77.6
Peaxi162Scf00038g01151 Petunia axillaris HOM05D005962 ORTHO05D007325 4.4e-71 271.9 171 77.2
Cpa.g.sc131.1 Carica papaya HOM05D005962 ORTHO05D007325 7.6e-71 271.2 175 77.1
Rhsim08G0229700 Rhododendron simsii HOM05D005962 ORTHO05D007325 7.6e-71 271.2 186 73.1
Sed0025844 Sechium edule HOM05D005962 ORTHO05D007325 1.7e-70 270.0 171 77.8
CAN.G1143.30 Capsicum annuum HOM05D005962 ORTHO05D007325 2.9e-70 269.2 139 88.5
ClCG07G013490 Citrullus lanatus HOM05D005962 ORTHO05D007325 2.9e-70 269.2 139 89.2
PGSC0003DMG401002516 Solanum tuberosum HOM05D005962 ORTHO05D007325 2.9e-70 269.2 171 76.0
QL08p056642 Quercus lobata HOM05D005962 ORTHO05D007325 3.8e-70 268.9 164 77.4
COL.COLO4_30547 Corchorus olitorius HOM05D005962 ORTHO05D007325 4.9e-70 268.5 168 76.2
Aqoxy2G04031 Aquilegia oxysepala HOM05D005962 ORTHO05D007325 6.4e-70 268.1 171 74.9
MBI01_g35895_MAGBIO Magnolia biondii HOM05D005962 ORTHO05D007325 6.4e-70 268.1 173 75.7
CSS0027495 Camellia sinensis var. sinensis HOM05D005962 ORTHO05D007325 8.4e-70 267.7 136 90.4
Prupe.3G054900 Prunus persica HOM05D005962 ORTHO05D007325 8.4e-70 267.7 172 76.2
ATR0705G221 Amborella trichopoda HOM05D005962 ORTHO05D007325 1.1e-69 267.3 171 76.0
CsaV3_3G023410 Cucumis sativus L. HOM05D005962 ORTHO05D007325 1.1e-69 267.3 139 88.5
Sopen12g023060 Solanum pennellii HOM05D005962 ORTHO05D007325 1.1e-69 267.3 168 77.4
Nitab4.5_0002423g0030 Nicotiana tabacum HOM05D005962 ORTHO05D007325 1.4e-69 266.9 171 77.2
PGSC0003DMG400026839 Solanum tuberosum HOM05D005962 ORTHO05D007325 1.9e-69 266.5 171 76.0
Haze_15888 Corylus avellana HOM05D005962 ORTHO05D007325 2.4e-69 266.2 164 78.0
Actinidia32123 Actinidia chinensis HOM05D005962 ORTHO05D007325 3.2e-69 265.8 171 77.2
arahy.Tifrunner.gnm1.ann1.FEFU12 Arachis hypogaea HOM05D005962 ORTHO05D007325 3.2e-69 265.8 167 80.2
CANSAT21G1984 Cannabis sativa HOM05D005962 ORTHO05D007325 3.2e-69 265.8 166 77.7
Nitab4.5_0001172g0180 Nicotiana tabacum HOM05D005962 ORTHO05D007325 3.2e-69 265.8 171 76.6
Sabra17G0126400 Salix brachista HOM05D005962 ORTHO05D007325 3.2e-69 265.8 171 76.0
Thecc.06G103400 Theobroma cacao HOM05D005962 ORTHO05D007325 4.2e-69 265.4 171 74.9
Duzib192G0276 Durio zibethinus HOM05D005962 ORTHO05D007325 5.4e-69 265.0 139 87.1
Sopen03g040020 Solanum pennellii HOM05D005962 ORTHO05D007325 5.4e-69 265.0 171 75.4
TWI12G1051 Tripterygium wilfordii HOM05D005962 ORTHO05D007325 9.3e-69 264.2 175 73.7
Solyc03g121210.4 Solanum lycopersicum HOM05D005962 ORTHO05D007325 1.2e-68 263.8 171 74.9
Solyc12g044640.2 Solanum lycopersicum HOM05D005962 ORTHO05D007325 1.2e-68 263.8 168 76.8
arahy.Tifrunner.gnm1.ann1.M52QXX Arachis hypogaea HOM05D005962 ORTHO05D007325 1.6e-68 263.5 139 87.1
Gohir.D01G215700 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.6e-68 263.5 164 77.4
Gorai.002G261900 Gossypium raimondii HOM05D005962 ORTHO05D007325 2.1e-68 263.1 139 87.8
Manes.11G030300 Manihot esculenta HOM05D005962 ORTHO05D007325 2.1e-68 263.1 139 86.3
GSVIVG01016927001 Vitis vinifera HOM05D005962 ORTHO05D007325 2.7e-68 262.7 136 88.2
Manes.04G136400 Manihot esculenta HOM05D005962 ORTHO05D007325 3.5e-68 262.3 139 86.3
Gorai.011G069400 Gossypium raimondii HOM05D005962 ORTHO05D007325 4.6e-68 261.9 140 85.0
Lalb_Chr01g0013231 Lupinus albus HOM05D005962 ORTHO05D007325 1.0e-67 260.8 167 77.8
Atru.chr12.732 Acer truncatum HOM05D005962 ORTHO05D007325 1.3e-67 260.4 164 76.2
VMungo0331G0822 Vigna mungo HOM05D005962 ORTHO05D007325 1.7e-67 260.0 139 85.6
Phvul.010G143300 Phaseolus vulgaris HOM05D005962 ORTHO05D007325 2.3e-67 259.6 162 75.9
Glyma.08G199200 Glycine max HOM05D005962 ORTHO05D007325 3.0e-67 259.2 139 84.9
RcHm_v2.0_Chr2g0141751 Rosa chinensis HOM05D005962 ORTHO05D007325 3.9e-67 258.8 162 75.3
Gohir.A01G226000 Gossypium hirsutum HOM05D005962 ORTHO05D007325 5.1e-67 258.5 139 86.3
AUR62018448 Chenopodium quinoa HOM05D005962 ORTHO05D007325 6.6e-67 258.1 171 73.7
AUR62020986 Chenopodium quinoa HOM05D005962 ORTHO05D007325 6.6e-67 258.1 171 73.7
Ciclev10026335m.g Citrus clementina HOM05D005962 ORTHO05D007325 6.6e-67 258.1 139 84.9
Gohir.A10G063800 Gossypium hirsutum HOM05D005962 ORTHO05D007325 6.6e-67 258.1 164 73.8
Lj3g0005277 Lotus japonicus HOM05D005962 ORTHO05D007325 6.6e-67 258.1 139 84.2
Sc19g0007830 Simmondsia chinensis HOM05D005962 ORTHO05D007325 6.6e-67 258.1 173 73.4
Gohir.D10G065400 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.9e-66 256.5 164 73.8
PSO210G0258 Papaver somniferum HOM05D005962 ORTHO05D007325 2.5e-66 256.1 168 75.6
Eucgr.J02602 Eucalyptus grandis HOM05D005962 ORTHO05D007325 3.3e-66 255.8 138 86.2
EL10Ac3g07358 Beta vulgaris HOM05D005962 ORTHO05D007325 5.6e-66 255.0 171 72.5
PSO210G7608 Papaver somniferum HOM05D005962 ORTHO05D007325 7.3e-66 254.6 168 75.6
Psat4g195960 Pisum sativum HOM05D005962 ORTHO05D007325 9.6e-66 254.2 156 76.9
PGR102G2175 Punica granatum HOM05D005962 ORTHO05D007325 1.3e-65 253.8 138 86.2
Ah.04g150140 Amaranthus hybridus HOM05D005962 ORTHO05D007325 2.1e-65 253.1 173 71.7
MELO3C013015.2 Cucumis melo HOM05D005962 ORTHO05D007325 2.1e-65 253.1 200 66.5
FAN09G1055 Fragaria x ananassa HOM05D005962 ORTHO05D007325 4.0e-64 248.8 162 72.2
Medtr8g015230 Medicago truncatula HOM05D005962 ORTHO05D007325 5.3e-64 248.4 156 75.6
FvH4_6g32730 Fragaria vesca HOM05D005962 ORTHO05D007325 6.9e-64 248.1 162 72.2
Aa31LG8G8050 Aethionema arabicum HOM05D005962 ORTHO05D007325 1.2e-63 247.3 137 83.2
FAN02G1749 Fragaria x ananassa HOM05D005962 ORTHO05D007325 1.5e-63 246.9 162 71.6
Zm00001eb372970 Zea mays HOM05D005962 ORTHO05D007325 3.4e-63 245.7 138 81.2
FAN05G1114 Fragaria x ananassa HOM05D005962 ORTHO05D007325 4.5e-63 245.4 162 71.0
HPP92_007682 Vanilla planifolia HOM05D005962 ORTHO05D007325 2.2e-62 243.0 173 69.9
Os06g0217500 Oryza sativa ssp. japonica HOM05D005962 ORTHO05D007325 3.8e-62 242.3 168 69.0
Sp3g19410 Schrenkiella parvula HOM05D005962 ORTHO05D007325 3.8e-62 242.3 137 80.3
THA.LOC104805924 Tarenaya hassleriana HOM05D005962 ORTHO05D007325 6.4e-62 241.5 139 80.6
BcaB06g26231 Brassica carinata HOM05D005962 ORTHO05D007325 1.4e-61 240.4 137 80.3
AL3G35400 Arabidopsis lyrata HOM05D005962 ORTHO05D007325 7.1e-61 238.0 137 79.6
BraA05t21615Z Brassica rapa HOM05D005962 ORTHO05D007325 7.1e-61 238.0 140 78.6
CARHR097270 Cardamine hirsuta HOM05D005962 ORTHO05D007325 7.1e-61 238.0 137 78.8
AT3G21350 Arabidopsis thaliana HOM05D005962 ORTHO05D007325 1.2e-60 237.3 137 79.6
Ca_23283_v3 Cicer arietinum L. HOM05D005962 ORTHO05D007325 1.6e-60 236.9 139 80.6
A05p27250 Brassica napus HOM05D005962 ORTHO05D007325 2.7e-60 236.1 140 77.9
BolC5t32941H Brassica oleracea HOM05D005962 ORTHO05D007325 3.5e-60 235.7 144 75.7
Thhalv10021373m.g Eutrema salsugineum HOM05D005962 ORTHO05D007325 3.5e-60 235.7 137 78.8
SHI11207 Sapria himalayana HOM05D005962 ORTHO05D007325 7.9e-60 234.6 138 78.3
BcaC05g28175 Brassica carinata HOM05D005962 ORTHO05D007325 1.0e-59 234.2 137 78.1
C05p42110 Brassica napus HOM05D005962 ORTHO05D007325 1.0e-59 234.2 137 78.1
Carub.0003s2138 Capsella rubella HOM05D005962 ORTHO05D007325 2.3e-59 233.0 137 77.4
HanXRQChr15g0489361 Helianthus annuus HOM05D005962 ORTHO05D007325 1.5e-58 230.3 139 80.6
AagrBONN_evm.TU.Sc2ySwM_362.1658 Anthoceros agrestis HOM05D005962 ORTHO05D007325 2.0e-55 219.9 141 71.6
Pp3c11_22580 Physcomitrium patens HOM05D005962 ORTHO05D007325 3.4e-55 219.2 140 73.6
Mapoly0012s0176 Marchantia polymorpha HOM05D005962 ORTHO05D007325 4.9e-54 215.3 141 71.6
SMO143G0120 Selaginella moellendorffii HOM05D005962 ORTHO05D007325 5.6e-50 201.8 138 67.4
TPR.G39766 Trifolium pratense HOM05D005962 ORTHO05D007325 8.5e-38 161.4 94 78.7
CBR_g22489 Chara braunii HOM05D005962 ORTHO05D007325 7.2e-37 158.3 136 57.4
Lj5A50T68 Lonicera japonica HOM05D005962 ORTHO05D007325 1.6e-36 157.1 80 92.5
Cfa019373 Carpinus fangiana HOM05D005962 ORTHO05D007325 4.3e-34 149.1 80 86.2
SEGI_18792 Sequoiadendron giganteum HOM05D005962 ORTHO05D007325 4.3e-34 149.1 82 84.1
MD14G1079700 Malus domestica HOM05D005962 ORTHO05D007325 2.8e-33 146.4 87 78.2
Medtr0361s0030 Medicago truncatula HOM05D005962 ORTHO05D007325 9.1e-32 141.4 81 80.2
QL05p018100 Quercus lobata HOM05D005962 ORTHO05D007325 5.5e-29 132.1 69 87.0
Lj5C50T14 Lonicera japonica HOM05D005962 ORTHO05D007325 2.7e-28 129.8 96 67.7
RcHm_v2.0_Chr5g0064381 Rosa chinensis HOM05D005962 ORTHO05D007325 5.9e-23 112.1 80 65.0
Dinv30416 Davidia involucrata HOM05D005962 ORTHO05D007325 7.7e-23 111.7 98 58.2
Lsat_1_v5_gn_2_99820 Lactuca sativa HOM05D005962 ORTHO05D007325 7.7e-23 111.7 59 83.1
Cfa019374 Carpinus fangiana HOM05D005962 ORTHO05D007325 9.4e-21 104.8 50 88.0
TAR623G1541 Trochodendron aralioides HOM05D005962 ORTHO05D007325 1.0e-19 101.3 58 79.3
Lj3g0016976 Lotus japonicus HOM05D005962 ORTHO05D007325 3.0e-19 99.8 105 51.4
Zm00001eb084330 Zea mays HOM05D005962 ORTHO05D007325 2.4e-16 90.1 57 71.9
PRCOL_00006676 Prasinoderma coloniale HOM05D001184 ORTHO05D008450 7.0e-16 88.6 130 38.5
Zm00001eb192830 Zea mays HOM05D005962 ORTHO05D007325 1.6e-15 87.4 58 67.2
Pp3c7_2870 Physcomitrium patens HOM05D005962 ORTHO05D007325 4.7e-12 75.9 137 38.7
TAR636G3265 Trochodendron aralioides HOM05D005962 ORTHO05D007325 3.3e-10 69.7 66 56.1
Nitab4.5_0008212g0010 Nicotiana tabacum HOM05D005962 ORTHO05D007325 6.3e-09 65.5 58 56.9
BraA09t39590Z Brassica rapa HOM05D002393 ORTHO05D002845 1.1e-08 64.7 49 63.3


User provided reference genes

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