Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00700 Erythranthe guttata HOM05D003719 ORTHO05D004116 3.7e-94 348.2 175 100.0
Migut.N01648 Erythranthe guttata HOM05D003719 ORTHO05D004116 9.0e-93 343.6 175 98.3
MSTRG.4990 Avicennia marina HOM05D003719 ORTHO05D004116 2.7e-57 225.7 173 67.6
SGA_v2.0_scaffold4G02229 Striga asiatica HOM05D003719 ORTHO05D004116 1.0e-48 197.2 175 61.7
Oeu020240.1 Olea europaea HOM05D003719 ORTHO05D004116 2.7e-44 182.6 176 55.1
unitig_0.g1580 Utricularia gibba HOM05D003719 ORTHO05D004116 1.2e-41 173.7 153 61.4
Dinv43958 Davidia involucrata HOM05D003719 ORTHO05D004116 1.3e-38 163.7 171 52.0
QL04p053441 Quercus lobata HOM05D003719 ORTHO05D004116 5.0e-35 151.8 178 50.6
Actinidia05832 Actinidia chinensis HOM05D003719 ORTHO05D004116 2.5e-34 149.4 174 49.4
Cc02_g26500 Coffea canephora HOM05D003719 ORTHO05D004116 2.5e-34 149.4 177 47.5
CiPaw.02G047600 Carya illinoinensis HOM05D003719 ORTHO05D004116 3.3e-34 149.1 177 46.3
GSVIVG01019328001 Vitis vinifera HOM05D003719 ORTHO05D004116 1.6e-33 146.7 168 50.0
Oeu024948.1 Olea europaea HOM05D003719 ORTHO05D004116 2.8e-33 146.0 173 49.1
Hma1.2p1_0128F.1_g060060 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 1.4e-32 143.7 187 45.5
Actinidia31730 Actinidia chinensis HOM05D003719 ORTHO05D004116 1.8e-32 143.3 171 47.4
ClCG06G000580 Citrullus lanatus HOM05D003719 ORTHO05D004116 4.0e-32 142.1 169 47.3
Nitab4.5_0003123g0030 Nicotiana tabacum HOM05D003719 ORTHO05D004116 2.0e-31 139.8 159 50.3
SGA_v2.0_scaffold95G28748 Striga asiatica HOM05D003719 ORTHO05D004116 2.6e-31 139.4 142 57.0
Nitab4.5_0000050g0180 Nicotiana tabacum HOM05D003719 ORTHO05D004116 9.8e-31 137.5 159 47.8
RcHm_v2.0_Chr1g0340791 Rosa chinensis HOM05D003719 ORTHO05D004116 9.8e-31 137.5 170 45.9
Peaxi162Scf00907g00023 Petunia axillaris HOM05D003719 ORTHO05D004116 1.7e-30 136.7 154 50.6
Rhsim07G0047900 Rhododendron simsii HOM05D003719 ORTHO05D004116 1.7e-30 136.7 173 45.1
FAN03G1006 Fragaria x ananassa HOM05D003719 ORTHO05D004116 2.2e-30 136.3 174 44.3
FAN06G0622 Fragaria x ananassa HOM05D003719 ORTHO05D004116 2.2e-30 136.3 174 44.3
FAN10G3972 Fragaria x ananassa HOM05D003719 ORTHO05D004116 2.2e-30 136.3 174 44.3
Sc02g0003460 Simmondsia chinensis HOM05D003719 ORTHO05D004116 2.4e-29 132.9 158 48.7
TWI60G0027 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 3.2e-29 132.5 166 46.4
CsaV3_6G006350 Cucumis sativus L. HOM05D003719 ORTHO05D004116 7.0e-29 131.3 171 45.0
Prupe.2G107000 Prunus persica HOM05D003719 ORTHO05D004116 7.0e-29 131.3 172 43.0
Ciclev10031549m.g Citrus clementina HOM05D003719 ORTHO05D004116 9.2e-29 131.0 177 45.2
Oeu032776.1 Olea europaea HOM05D003719 ORTHO05D004116 1.2e-28 130.6 141 53.2
Gohir.D11G317400 Gossypium hirsutum HOM05D003719 ORTHO05D004116 1.6e-28 130.2 170 44.1
Gorai.007G347200 Gossypium raimondii HOM05D003719 ORTHO05D004116 1.6e-28 130.2 170 44.1
Peaxi162Scf00245g00417 Petunia axillaris HOM05D003719 ORTHO05D004116 1.6e-28 130.2 168 45.8
Potri.013G070400 Populus trichocarpa HOM05D003719 ORTHO05D004116 1.6e-28 130.2 170 44.1
Sed0010466 Sechium edule HOM05D003719 ORTHO05D004116 1.6e-28 130.2 169 44.4
PGSC0003DMG400031112 Solanum tuberosum HOM05D003719 ORTHO05D004116 1.6e-28 130.2 154 47.4
Gohir.A11G301800 Gossypium hirsutum HOM05D003719 ORTHO05D004116 2.0e-28 129.8 170 43.5
CANSAT25G2268 Cannabis sativa HOM05D003719 ORTHO05D004116 2.7e-28 129.4 176 42.0
TAR629G0070 Trochodendron aralioides HOM05D003719 ORTHO05D004116 2.7e-28 129.4 172 44.8
COL.COLO4_32214 Corchorus olitorius HOM05D003719 ORTHO05D004116 3.5e-28 129.0 177 45.2
MD07G1081800 Malus domestica HOM05D003719 ORTHO05D004116 3.5e-28 129.0 170 42.4
Nn1g09363 Nelumbo nucifera HOM05D003719 ORTHO05D004116 3.5e-28 129.0 171 44.4
Potri.019G044400 Populus trichocarpa HOM05D003719 ORTHO05D004116 3.5e-28 129.0 168 44.0
MD02G1231000 Malus domestica HOM05D003719 ORTHO05D004116 6.0e-28 128.3 178 41.6
Nitab4.5_0000792g0110 Nicotiana tabacum HOM05D003719 ORTHO05D004116 6.0e-28 128.3 155 49.0
TWI32G1338 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 6.0e-28 128.3 172 43.6
Duzib128G0107 Durio zibethinus HOM05D003719 ORTHO05D004116 7.8e-28 127.9 171 43.9
VMungo1309G0350 Vigna mungo HOM05D003719 ORTHO05D004116 7.8e-28 127.9 141 51.1
Phvul.009G117500 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 1.0e-27 127.5 136 50.0
Thecc.05G235300 Theobroma cacao HOM05D003719 ORTHO05D004116 1.0e-27 127.5 172 41.9
MBI04_g06283_MAGBIO Magnolia biondii HOM05D003719 ORTHO05D004116 1.3e-27 127.1 174 43.1
Sed0012975 Sechium edule HOM05D003719 ORTHO05D004116 1.3e-27 127.1 168 44.6
MELO3C022484.2 Cucumis melo HOM05D003719 ORTHO05D004116 3.0e-27 125.9 170 43.5
Manes.09G133700 Manihot esculenta HOM05D003719 ORTHO05D004116 3.0e-27 125.9 185 43.8
Glyma.16G079900 Glycine max HOM05D003719 ORTHO05D004116 6.6e-27 124.8 177 44.1
THA.LOC104827246 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 6.6e-27 124.8 165 44.8
Aqoxy7G02508 Aquilegia oxysepala HOM05D003719 ORTHO05D004116 1.5e-26 123.6 133 50.4
Dinv43515 Davidia involucrata HOM05D003719 ORTHO05D004116 4.3e-26 122.1 159 44.7
THA.LOC104820814 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 4.3e-26 122.1 161 45.3
TPR.G38555 Trifolium pratense HOM05D001257 ORTHO05D005285 5.6e-26 121.7 169 44.4
Oeu045633.2 Olea europaea HOM05D003719 ORTHO05D004116 1.6e-25 120.2 140 47.9
AUR62038028 Chenopodium quinoa HOM05D003719 ORTHO05D004116 2.1e-25 119.8 157 44.6
Eucgr.E01743 Eucalyptus grandis HOM05D003719 ORTHO05D004116 2.1e-25 119.8 172 43.0
EL10Ac1g00661 Beta vulgaris HOM05D003719 ORTHO05D004116 3.6e-25 119.0 154 47.4
Lj3g0017682 Lotus japonicus HOM05D003719 ORTHO05D004116 3.6e-25 119.0 168 41.1
Sopen01g033060 Solanum pennellii HOM05D003719 ORTHO05D004116 3.6e-25 119.0 152 47.4
Solyc01g081500.4 Solanum lycopersicum HOM05D003719 ORTHO05D004116 6.2e-25 118.2 152 47.4
ECA248G2234 Erigeron canadensis HOM05D003719 ORTHO05D004116 1.4e-24 117.1 127 48.0
THA.LOC104802889 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 1.8e-24 116.7 175 44.6
Atru.chr2.1627 Acer truncatum HOM05D003719 ORTHO05D004116 4.0e-24 115.5 171 43.9
Ah.05g177100 Amaranthus hybridus HOM05D003719 ORTHO05D004116 5.2e-24 115.2 174 41.4
Phvul.010G034600 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 5.2e-24 115.2 172 43.0
CDE11G0837 Ceratophyllum demersum HOM05D003719 ORTHO05D004116 1.2e-23 114.0 158 43.7
Psat5g001120 Pisum sativum HOM05D003719 ORTHO05D004116 1.2e-23 114.0 170 44.1
Thhalv10013571m.g Eutrema salsugineum HOM05D003719 ORTHO05D004116 1.5e-23 113.6 167 44.9
arahy.Tifrunner.gnm1.ann1.N569AS Arachis hypogaea HOM05D003719 ORTHO05D004116 2.0e-23 113.2 167 43.7
Manes.08G156200 Manihot esculenta HOM05D003719 ORTHO05D004116 2.6e-23 112.8 172 44.8
CsaV3_3G009890 Cucumis sativus L. HOM05D002544 ORTHO05D007277 5.8e-23 111.7 173 40.5
AL6G28780 Arabidopsis lyrata HOM05D003719 ORTHO05D004116 9.8e-23 110.9 168 44.0
AT5G17690 Arabidopsis thaliana HOM05D003719 ORTHO05D004116 1.3e-22 110.5 168 44.0
PGR042G1172 Punica granatum HOM05D003719 ORTHO05D004116 1.3e-22 110.5 157 45.9
CARHR195490 Cardamine hirsuta HOM05D003719 ORTHO05D004116 1.7e-22 110.2 167 43.1
HanXRQChr04g0117621 Helianthus annuus HOM05D003719 ORTHO05D004116 1.7e-22 110.2 165 40.0
Sed0017190 Sechium edule HOM05D003719 ORTHO05D004116 2.2e-22 109.8 166 41.6
Carub.0006s1593 Capsella rubella HOM05D003719 ORTHO05D004116 2.9e-22 109.4 168 43.5
A02p04380 Brassica napus HOM05D003719 ORTHO05D004116 3.7e-22 109.0 138 45.7
BraA02t05402Z Brassica rapa HOM05D003719 ORTHO05D004116 4.9e-22 108.6 138 45.7
BolC2t06833H Brassica oleracea HOM05D003719 ORTHO05D004116 8.3e-22 107.8 143 44.1
BcaC03g13534 Brassica carinata HOM05D003719 ORTHO05D004116 1.1e-21 107.5 144 43.8
C02p09250 Brassica napus HOM05D003719 ORTHO05D004116 1.1e-21 107.5 144 43.8
TPR.G9787 Trifolium pratense HOM05D003719 ORTHO05D004116 2.4e-21 106.3 183 37.2
Aa31LG11G11940 Aethionema arabicum HOM05D003719 ORTHO05D004116 3.2e-21 105.9 137 46.0
BcaC04g18768 Brassica carinata HOM05D003719 ORTHO05D004116 3.2e-21 105.9 143 44.8
C09p59480 Brassica napus HOM05D003719 ORTHO05D004116 3.2e-21 105.9 143 44.8
BolC9t58786H Brassica oleracea HOM05D003719 ORTHO05D004116 3.2e-21 105.9 143 44.8
arahy.Tifrunner.gnm1.ann1.U92JU2 Arachis hypogaea HOM05D003719 ORTHO05D004116 4.1e-21 105.5 164 42.1
BcaB08g36751 Brassica carinata HOM05D003719 ORTHO05D004116 4.1e-21 105.5 144 43.8
PSO170G0628 Papaver somniferum HOM05D003719 ORTHO05D004116 4.1e-21 105.5 133 47.4
PGSC0003DMG400031514 Solanum tuberosum HOM05D003719 ORTHO05D004116 4.1e-21 105.5 160 40.0
Glyma.06G001700 Glycine max HOM05D003719 ORTHO05D004116 5.4e-21 105.1 129 46.5
Duzib177G0203 Durio zibethinus HOM05D003719 ORTHO05D004116 9.2e-21 104.4 158 40.5
Sp6g26530 Schrenkiella parvula HOM05D003719 ORTHO05D004116 1.2e-20 104.0 167 40.1
A10p21730 Brassica napus HOM05D003719 ORTHO05D004116 1.6e-20 103.6 167 41.9
BraA10t44234Z Brassica rapa HOM05D003719 ORTHO05D004116 1.6e-20 103.6 167 41.9
Os10g0324900 Oryza sativa ssp. japonica HOM05D003719 ORTHO05D004116 1.6e-20 103.6 175 38.9
ECA236G3956 Erigeron canadensis HOM05D001257 ORTHO05D005285 2.7e-20 102.8 149 40.3
HanXRQChr11g0343451 Helianthus annuus HOM05D003719 ORTHO05D004116 6.0e-20 101.7 127 42.5
PSO017G6528 Papaver somniferum HOM05D003719 ORTHO05D004116 7.8e-20 101.3 133 45.1
Glyma.04G002100 Glycine max HOM05D003719 ORTHO05D004116 1.3e-19 100.5 129 47.3
Sabra19G0054700 Salix brachista HOM05D003719 ORTHO05D004116 1.3e-19 100.5 159 40.3
Solyc10g024470.3 Solanum lycopersicum HOM05D003719 ORTHO05D004116 3.9e-19 99.0 160 39.4
Sopen10g009690 Solanum pennellii HOM05D003719 ORTHO05D004116 5.1e-19 98.6 159 39.6
ClCG05G002450 Citrullus lanatus HOM05D003719 ORTHO05D004116 1.1e-18 97.4 160 41.9
ATR0568G049 Amborella trichopoda HOM05D003719 ORTHO05D004116 1.2e-17 94.0 175 40.0
Glyma.03G094200 Glycine max HOM05D003719 ORTHO05D004116 1.2e-17 94.0 168 39.3
Hund17170 Selenicereus undatus HOM05D003719 ORTHO05D000105 2.1e-17 93.2 153 41.8
Lalb_Chr23g0264911 Lupinus albus HOM05D003719 ORTHO05D004116 3.6e-17 92.4 178 36.5
Ca_23168_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 1.1e-16 90.9 177 39.0
SEGI_39270 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 1.4e-16 90.5 156 41.0
Hund26916 Selenicereus undatus HOM05D003719 ORTHO05D004116 1.8e-16 90.1 140 37.9
Lsat_1_v5_gn_1_89600 Lactuca sativa HOM05D003719 ORTHO05D004116 1.5e-15 87.0 164 37.8
Haze_15777 Corylus avellana HOM05D003719 ORTHO05D004116 2.6e-15 86.3 147 40.1
vmacro13601 Vaccinium macrocarpon HOM05D003719 ORTHO05D004116 2.6e-15 86.3 141 39.7
Lalb_Chr13g0290971 Lupinus albus HOM05D003719 ORTHO05D004116 5.8e-15 85.1 166 33.7
Mapoly0009s0028 Marchantia polymorpha HOM05D003719 ORTHO05D004116 7.6e-15 84.7 169 36.7
Lalb_Chr07g0194591 Lupinus albus HOM05D003719 ORTHO05D004116 1.7e-14 83.6 172 33.7
PSO732G0471 Papaver somniferum HOM05D003719 ORTHO05D004116 1.7e-14 83.6 160 37.5
Cpa.g.sc73.30 Carica papaya HOM05D003719 ORTHO05D004116 3.7e-14 82.4 138 39.1
SHI50054 Sapria himalayana HOM05D003719 ORTHO05D004116 3.7e-14 82.4 161 37.9
arahy.Tifrunner.gnm1.ann1.E07VAV Arachis hypogaea HOM05D003719 ORTHO05D004116 8.4e-14 81.3 158 34.2
Pp3c9_6410 Physcomitrium patens HOM05D003719 ORTHO05D004116 8.4e-14 81.3 101 45.5
FAN01G0740 Fragaria x ananassa HOM05D003719 ORTHO05D004116 1.1e-13 80.9 109 41.3
Sabra13G0061200 Salix brachista HOM05D003719 ORTHO05D004116 1.1e-13 80.9 138 37.0
HPP92_020485 Vanilla planifolia HOM05D003719 ORTHO05D004116 5.4e-13 78.6 165 35.2
FvH4_7g08280 Fragaria vesca HOM05D003719 ORTHO05D004116 7.1e-13 78.2 141 34.8
Ca_15283_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 2.1e-12 76.6 137 38.0
Ca_15419_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 2.1e-12 76.6 137 38.0
A03p08460 Brassica napus HOM05D003719 ORTHO05D004116 3.5e-12 75.9 146 32.2
BraA03t10169Z Brassica rapa HOM05D003719 ORTHO05D004116 3.5e-12 75.9 146 32.2
Hma1.2p1_0462F.1_g158020 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 3.5e-12 75.9 111 44.1
VMungo0331G0617 Vigna mungo HOM05D003719 ORTHO05D004116 4.6e-12 75.5 148 38.5
Lsat_1_v5_gn_7_34101 Lactuca sativa HOM05D003719 ORTHO05D004116 7.8e-12 74.7 166 33.1
Lj9A617T60 Lonicera japonica HOM05D003719 ORTHO05D004116 7.8e-12 74.7 102 44.1
BcaB01g05152 Brassica carinata HOM05D003719 ORTHO05D004116 1.3e-11 73.9 77 45.5
C03p09860 Brassica napus HOM05D003719 ORTHO05D004116 1.3e-11 73.9 77 45.5
BolC3t13474H Brassica oleracea HOM05D003719 ORTHO05D004116 1.3e-11 73.9 77 45.5
BraA09t37591Z Brassica rapa HOM05D003719 ORTHO05D004116 1.7e-11 73.6 131 36.6
DCAR_029570 Daucus carota HOM05D003719 ORTHO05D004116 3.9e-11 72.4 117 38.5
Nitab4.5_0025236g0010 Nicotiana tabacum HOM05D003719 ORTHO05D004116 5.1e-11 72.0 122 41.0
CAN.G1612.6 Capsicum annuum HOM05D003719 ORTHO05D004116 3.3e-10 69.3 69 50.7
BcaB01g04909 Brassica carinata HOM05D003719 ORTHO05D004116 2.8e-09 66.2 179 31.3
Nn7g37398 Nelumbo nucifera HOM05D003719 ORTHO05D004116 3.6e-09 65.9 45 71.1
CAN.G1260.1 Capsicum annuum HOM05D003719 ORTHO05D004116 1.1e-08 64.3 57 52.6
Lalb_Chr10g0091841 Lupinus albus HOM05D003719 ORTHO05D004116 3.1e-08 62.8 52 57.7
AUR62014507 Chenopodium quinoa HOM05D003719 ORTHO05D004116 2.6e-07 59.7 122 32.8
SHI15580 Sapria himalayana HOM05D003719 ORTHO05D004116 2.6e-07 59.7 128 36.7
SHI15577 Sapria himalayana HOM05D003719 ORTHO05D004116 9.9e-07 57.8 31 80.6
Ah.05g177090 Amaranthus hybridus HOM05D000308 ORTHO05D005285 4.9e-06 55.5 138 31.2
CAN.G1612.7 Capsicum annuum HOM05D000541 ORTHO05D000137 8.4e-06 54.7 59 47.5
Lalb_Chr12g0210141 Lupinus albus HOM05D003719 ORTHO05D004116 8.4e-06 54.7 168 29.2


User provided reference genes

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