Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00699 Erythranthe guttata HOM05D003719 ORTHO05D004116 9.7e-124 446.8 225 100.0
Migut.N01648 Erythranthe guttata HOM05D003719 ORTHO05D004116 2.8e-107 392.1 217 94.9
SGA_v2.0_scaffold95G28748 Striga asiatica HOM05D003719 ORTHO05D004116 1.0e-48 197.6 222 55.9
Oeu034882.1 Olea europaea HOM05D003719 ORTHO05D004116 1.6e-46 190.3 217 51.6
MSTRG.4990 Avicennia marina HOM05D003719 ORTHO05D004116 2.8e-46 189.5 221 55.2
Oeu045633.2 Olea europaea HOM05D003719 ORTHO05D004116 1.4e-42 177.2 168 57.1
Oeu024948.1 Olea europaea HOM05D003719 ORTHO05D004116 2.7e-41 172.9 171 57.9
Oeu032776.1 Olea europaea HOM05D003719 ORTHO05D004116 1.7e-35 153.7 157 56.7
Nitab4.5_0025236g0010 Nicotiana tabacum HOM05D003719 ORTHO05D004116 5.0e-35 152.1 216 44.0
Dinv43515 Davidia involucrata HOM05D003719 ORTHO05D004116 1.9e-34 150.2 130 60.0
Nitab4.5_0000792g0110 Nicotiana tabacum HOM05D003719 ORTHO05D004116 4.2e-34 149.1 128 58.6
Actinidia05832 Actinidia chinensis HOM05D003719 ORTHO05D004116 2.1e-33 146.7 225 44.9
Actinidia31730 Actinidia chinensis HOM05D003719 ORTHO05D004116 3.9e-32 142.5 237 44.3
Oeu020240.1 Olea europaea HOM05D003719 ORTHO05D004116 5.1e-32 142.1 133 54.9
Dinv43958 Davidia involucrata HOM05D003719 ORTHO05D004116 8.7e-32 141.4 126 58.7
Nitab4.5_0000050g0180 Nicotiana tabacum HOM05D003719 ORTHO05D004116 1.5e-31 140.6 150 51.3
Eucgr.E01743 Eucalyptus grandis HOM05D003719 ORTHO05D004116 9.7e-31 137.9 96 69.8
PGR042G1172 Punica granatum HOM05D003719 ORTHO05D004116 4.8e-30 135.6 94 69.1
unitig_0.g1580 Utricularia gibba HOM05D003719 ORTHO05D004116 8.2e-30 134.8 212 44.8
Lj9A617T60 Lonicera japonica HOM05D003719 ORTHO05D004116 1.8e-29 133.7 124 56.5
ClCG06G000580 Citrullus lanatus HOM05D003719 ORTHO05D004116 3.1e-29 132.9 135 52.6
Hma1.2p1_0128F.1_g060060 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 3.1e-29 132.9 212 43.9
Cc02_g26500 Coffea canephora HOM05D003719 ORTHO05D004116 5.3e-29 132.1 125 55.2
MELO3C022484.2 Cucumis melo HOM05D003719 ORTHO05D004116 6.9e-29 131.7 90 70.0
CsaV3_6G006350 Cucumis sativus L. HOM05D003719 ORTHO05D004116 2.0e-28 130.2 90 68.9
Duzib128G0107 Durio zibethinus HOM05D003719 ORTHO05D004116 4.5e-28 129.0 112 61.6
TAR629G0070 Trochodendron aralioides HOM05D003719 ORTHO05D004116 4.5e-28 129.0 97 64.9
HanXRQChr04g0117621 Helianthus annuus HOM05D003719 ORTHO05D004116 7.7e-28 128.3 132 51.5
Rhsim07G0047900 Rhododendron simsii HOM05D003719 ORTHO05D004116 7.7e-28 128.3 225 44.9
Gohir.A11G301800 Gossypium hirsutum HOM05D003719 ORTHO05D004116 1.0e-27 127.9 88 70.5
Gohir.D11G317400 Gossypium hirsutum HOM05D003719 ORTHO05D004116 1.0e-27 127.9 88 70.5
Gorai.007G347200 Gossypium raimondii HOM05D003719 ORTHO05D004116 1.0e-27 127.9 88 70.5
Thecc.05G235300 Theobroma cacao HOM05D003719 ORTHO05D004116 1.0e-27 127.9 125 55.2
QL04p053441 Quercus lobata HOM05D003719 ORTHO05D004116 1.7e-27 127.1 96 66.7
Haze_15777 Corylus avellana HOM05D003719 ORTHO05D004116 2.2e-27 126.7 126 56.3
Nn1g09363 Nelumbo nucifera HOM05D003719 ORTHO05D004116 2.2e-27 126.7 86 69.8
Sed0010466 Sechium edule HOM05D003719 ORTHO05D004116 3.8e-27 125.9 105 61.9
Duzib177G0203 Durio zibethinus HOM05D003719 ORTHO05D004116 6.5e-27 125.2 122 54.9
Manes.09G133700 Manihot esculenta HOM05D003719 ORTHO05D004116 6.5e-27 125.2 212 42.5
Potri.019G044400 Populus trichocarpa HOM05D003719 ORTHO05D004116 8.5e-27 124.8 174 48.9
RcHm_v2.0_Chr1g0340791 Rosa chinensis HOM05D003719 ORTHO05D004116 8.5e-27 124.8 123 54.5
PGSC0003DMG400031112 Solanum tuberosum HOM05D003719 ORTHO05D004116 8.5e-27 124.8 126 53.2
Sed0012975 Sechium edule HOM05D003719 ORTHO05D004116 1.4e-26 124.0 192 44.3
THA.LOC104802889 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 1.9e-26 123.6 87 70.1
CANSAT25G2268 Cannabis sativa HOM05D003719 ORTHO05D004116 3.2e-26 122.9 86 68.6
PGSC0003DMG400031514 Solanum tuberosum HOM05D003719 ORTHO05D004116 4.2e-26 122.5 124 53.2
Carub.0006s1593 Capsella rubella HOM05D003719 ORTHO05D004116 5.5e-26 122.1 94 67.0
CARHR195490 Cardamine hirsuta HOM05D003719 ORTHO05D004116 5.5e-26 122.1 91 67.0
Cpa.g.sc73.30 Carica papaya HOM05D003719 ORTHO05D004116 5.5e-26 122.1 101 66.3
Manes.08G156200 Manihot esculenta HOM05D003719 ORTHO05D004116 5.5e-26 122.1 90 66.7
Solyc10g024470.3 Solanum lycopersicum HOM05D003719 ORTHO05D004116 5.5e-26 122.1 123 54.5
Sopen10g009690 Solanum pennellii HOM05D003719 ORTHO05D004116 5.5e-26 122.1 123 54.5
FvH4_7g08280 Fragaria vesca HOM05D003719 ORTHO05D004116 7.2e-26 121.7 84 69.0
DCAR_025000 Daucus carota HOM05D003719 ORTHO05D004116 2.1e-25 120.2 135 51.9
DCAR_015727 Daucus carota HOM05D003719 ORTHO05D004116 2.7e-25 119.8 98 61.2
AL6G28780 Arabidopsis lyrata HOM05D003719 ORTHO05D004116 3.6e-25 119.4 94 66.0
AT5G17690 Arabidopsis thaliana HOM05D003719 ORTHO05D004116 3.6e-25 119.4 94 66.0
SGA_v2.0_scaffold4G02229 Striga asiatica HOM05D003719 ORTHO05D004116 3.6e-25 119.4 211 42.7
Solyc01g081500.4 Solanum lycopersicum HOM05D003719 ORTHO05D004116 4.6e-25 119.0 126 53.2
Sopen01g033060 Solanum pennellii HOM05D003719 ORTHO05D004116 4.6e-25 119.0 126 53.2
THA.LOC104827246 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 4.6e-25 119.0 104 60.6
Potri.013G070400 Populus trichocarpa HOM05D003719 ORTHO05D004116 7.9e-25 118.2 192 45.8
THA.LOC104820814 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 7.9e-25 118.2 191 44.5
Thhalv10013571m.g Eutrema salsugineum HOM05D003719 ORTHO05D004116 1.0e-24 117.9 92 65.2
TWI60G0027 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 1.0e-24 117.9 90 63.3
GSVIVG01019328001 Vitis vinifera HOM05D003719 ORTHO05D004116 1.0e-24 117.9 89 64.0
BcaC03g13534 Brassica carinata HOM05D003719 ORTHO05D004116 1.4e-24 117.5 90 66.7
C02p09250 Brassica napus HOM05D003719 ORTHO05D004116 1.4e-24 117.5 90 66.7
BolC2t06833H Brassica oleracea HOM05D003719 ORTHO05D004116 1.4e-24 117.5 90 66.7
MBI04_g06283_MAGBIO Magnolia biondii HOM05D003719 ORTHO05D004116 1.4e-24 117.5 86 65.1
Aa31LG11G11940 Aethionema arabicum HOM05D003719 ORTHO05D004116 1.8e-24 117.1 95 65.3
Sabra19G0054700 Salix brachista HOM05D003719 ORTHO05D004116 3.0e-24 116.3 193 45.6
Sp6g26530 Schrenkiella parvula HOM05D003719 ORTHO05D004116 3.0e-24 116.3 90 64.4
ClCG05G002450 Citrullus lanatus HOM05D003719 ORTHO05D004116 6.7e-24 115.2 138 47.8
A02p04380 Brassica napus HOM05D003719 ORTHO05D004116 8.8e-24 114.8 90 64.4
BraA02t05402Z Brassica rapa HOM05D003719 ORTHO05D004116 8.8e-24 114.8 90 64.4
Sc02g0003460 Simmondsia chinensis HOM05D003719 ORTHO05D004116 8.8e-24 114.8 118 49.2
TWI32G1338 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 8.8e-24 114.8 169 47.9
MD02G1231000 Malus domestica HOM05D003719 ORTHO05D004116 1.5e-23 114.0 95 58.9
Atru.chr2.1627 Acer truncatum HOM05D003719 ORTHO05D004116 2.0e-23 113.6 69 72.5
Sabra13G0061200 Salix brachista HOM05D003719 ORTHO05D004116 2.0e-23 113.6 193 43.5
BcaB08g36751 Brassica carinata HOM05D003719 ORTHO05D004116 2.5e-23 113.2 94 61.7
BraA09t37591Z Brassica rapa HOM05D003719 ORTHO05D004116 2.5e-23 113.2 87 64.4
BraA09t38097Z Brassica rapa HOM05D003719 ORTHO05D004116 2.5e-23 113.2 87 64.4
Peaxi162Scf00245g00417 Petunia axillaris HOM05D003719 ORTHO05D004116 3.3e-23 112.8 157 42.7
ECA236G3956 Erigeron canadensis HOM05D001257 ORTHO05D005285 5.7e-23 112.1 134 47.8
Ciclev10031549m.g Citrus clementina HOM05D003719 ORTHO05D004116 7.4e-23 111.7 65 75.4
BcaC04g18768 Brassica carinata HOM05D003719 ORTHO05D004116 1.3e-22 110.9 75 70.7
A10p21730 Brassica napus HOM05D003719 ORTHO05D004116 1.3e-22 110.9 75 70.7
C09p59480 Brassica napus HOM05D003719 ORTHO05D004116 1.3e-22 110.9 75 70.7
BolC9t58786H Brassica oleracea HOM05D003719 ORTHO05D004116 1.3e-22 110.9 75 70.7
BraA10t44234Z Brassica rapa HOM05D003719 ORTHO05D004116 1.3e-22 110.9 75 70.7
EL10Ac1g00661 Beta vulgaris HOM05D003719 ORTHO05D004116 1.7e-22 110.5 86 59.3
Aqoxy7G02508 Aquilegia oxysepala HOM05D003719 ORTHO05D004116 2.2e-22 110.2 75 69.3
HPP92_020485 Vanilla planifolia HOM05D003719 ORTHO05D004116 6.3e-22 108.6 89 56.2
PSO017G6528 Papaver somniferum HOM05D003719 ORTHO05D004116 1.1e-21 107.8 74 70.3
PSO170G0628 Papaver somniferum HOM05D003719 ORTHO05D004116 1.1e-21 107.8 74 70.3
Ah.05g177100 Amaranthus hybridus HOM05D003719 ORTHO05D004116 1.4e-21 107.5 91 54.9
Phvul.009G117500 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 1.4e-21 107.5 106 53.8
Phvul.010G034600 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 2.4e-21 106.7 90 56.7
SHI54853 Sapria himalayana HOM05D003719 ORTHO05D004116 2.4e-21 106.7 83 61.4
arahy.Tifrunner.gnm1.ann1.N569AS Arachis hypogaea HOM05D003719 ORTHO05D004116 3.1e-21 106.3 84 60.7
CiPaw.02G047600 Carya illinoinensis HOM05D003719 ORTHO05D004116 3.1e-21 106.3 183 42.6
Nn7g37398 Nelumbo nucifera HOM05D003719 ORTHO05D004116 3.1e-21 106.3 61 77.0
Glyma.16G079900 Glycine max HOM05D003719 ORTHO05D004116 4.1e-21 105.9 90 56.7
Lsat_1_v5_gn_7_34101 Lactuca sativa HOM05D003719 ORTHO05D004116 6.9e-21 105.1 140 46.4
Os10g0324900 Oryza sativa ssp. japonica HOM05D003719 ORTHO05D004116 6.9e-21 105.1 151 45.7
Glyma.03G094200 Glycine max HOM05D003719 ORTHO05D004116 9.1e-21 104.8 90 56.7
Lsat_1_v5_gn_1_89600 Lactuca sativa HOM05D003719 ORTHO05D004116 9.1e-21 104.8 135 45.9
TPR.G38555 Trifolium pratense HOM05D001257 ORTHO05D005285 9.1e-21 104.8 111 51.4
MD07G1081800 Malus domestica HOM05D003719 ORTHO05D004116 1.2e-20 104.4 167 42.5
ATR0568G049 Amborella trichopoda HOM05D003719 ORTHO05D004116 1.5e-20 104.0 80 58.8
arahy.Tifrunner.gnm1.ann1.U92JU2 Arachis hypogaea HOM05D003719 ORTHO05D004116 1.5e-20 104.0 116 49.1
VMungo0331G0617 Vigna mungo HOM05D003719 ORTHO05D004116 1.5e-20 104.0 110 50.0
Nitab4.5_0003123g0030 Nicotiana tabacum HOM05D003719 ORTHO05D004116 2.0e-20 103.6 171 40.4
FAN06G0622 Fragaria x ananassa HOM05D003719 ORTHO05D004116 2.6e-20 103.2 102 55.9
Lj3g0017682 Lotus japonicus HOM05D003719 ORTHO05D004116 2.6e-20 103.2 103 49.5
Glyma.04G002100 Glycine max HOM05D003719 ORTHO05D004116 3.4e-20 102.8 71 67.6
FAN10G3972 Fragaria x ananassa HOM05D003719 ORTHO05D004116 4.5e-20 102.4 96 57.3
Lalb_Chr23g0264911 Lupinus albus HOM05D003719 ORTHO05D004116 7.7e-20 101.7 84 56.0
HanXRQChr11g0343451 Helianthus annuus HOM05D003719 ORTHO05D004116 1.0e-19 101.3 134 44.8
Hund17170 Selenicereus undatus HOM05D003719 ORTHO05D000105 1.0e-19 101.3 86 54.7
HanXRQChr04g0117671 Helianthus annuus HOM05D003719 ORTHO05D004116 6.5e-19 98.6 74 59.5
TPR.G9787 Trifolium pratense HOM05D003719 ORTHO05D004116 8.5e-19 98.2 108 47.2
Psat5g001120 Pisum sativum HOM05D003719 ORTHO05D004116 1.9e-18 97.1 98 51.0
CDE11G0837 Ceratophyllum demersum HOM05D003719 ORTHO05D004116 2.5e-18 96.7 129 47.3
DCAR_029570 Daucus carota HOM05D003719 ORTHO05D004116 3.2e-18 96.3 104 49.0
Ca_23168_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 4.2e-18 95.9 185 38.4
Glyma.03G111600 Glycine max HOM05D003719 ORTHO05D004116 4.2e-18 95.9 151 41.1
Mapoly0009s0028 Marchantia polymorpha HOM05D003719 ORTHO05D004116 4.2e-18 95.9 83 53.0
SEGI_28532 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 4.2e-18 95.9 109 43.1
vmacro13601 Vaccinium macrocarpon HOM05D003719 ORTHO05D004116 4.2e-18 95.9 105 53.3
ECA248G2234 Erigeron canadensis HOM05D003719 ORTHO05D004116 1.6e-17 94.0 87 54.0
Sed0017190 Sechium edule HOM05D003719 ORTHO05D004116 6.1e-17 92.0 105 44.8
VMungo1309G0350 Vigna mungo HOM05D003719 ORTHO05D004116 6.1e-17 92.0 115 44.3
CsaV3_3G009890 Cucumis sativus L. HOM05D002544 ORTHO05D007277 7.9e-17 91.7 76 52.6
FAN01G0294 Fragaria x ananassa HOM05D003719 ORTHO05D004116 7.9e-17 91.7 106 50.0
Glyma.06G001700 Glycine max HOM05D003719 ORTHO05D004116 1.4e-16 90.9 140 42.9
Psat4g207560 Pisum sativum HOM05D003719 ORTHO05D004116 1.4e-16 90.9 90 47.8
Lalb_Chr12g0210141 Lupinus albus HOM05D003719 ORTHO05D004116 1.8e-16 90.5 118 44.1
Lalb_Chr10g0091841 Lupinus albus HOM05D003719 ORTHO05D004116 3.9e-16 89.4 76 56.6
PSO170G3936 Papaver somniferum HOM05D033783 ORTHO05D004116 5.1e-16 89.0 70 62.9
A03p08460 Brassica napus HOM05D003719 ORTHO05D004116 6.7e-16 88.6 73 58.9
BraA03t10169Z Brassica rapa HOM05D003719 ORTHO05D004116 6.7e-16 88.6 73 58.9
Peaxi162Scf00907g00023 Petunia axillaris HOM05D003719 ORTHO05D004116 6.7e-16 88.6 77 59.7
BcaB01g05152 Brassica carinata HOM05D003719 ORTHO05D004116 8.8e-16 88.2 72 59.7
BolC3t13474H Brassica oleracea HOM05D003719 ORTHO05D004116 8.8e-16 88.2 72 59.7
PSO017G2979 Papaver somniferum HOM05D033783 ORTHO05D004116 8.8e-16 88.2 69 63.8
PSO017G0756 Papaver somniferum HOM05D003719 ORTHO05D004116 5.7e-15 85.5 78 52.6
PSO732G0471 Papaver somniferum HOM05D003719 ORTHO05D004116 1.3e-14 84.3 75 57.3
PSO732G0498 Papaver somniferum HOM05D003719 ORTHO05D004116 1.3e-14 84.3 75 57.3
Lalb_Chr07g0194591 Lupinus albus HOM05D003719 ORTHO05D004116 2.8e-14 83.2 148 37.8
Lalb_Chr13g0290971 Lupinus albus HOM05D003719 ORTHO05D004116 2.8e-14 83.2 85 49.4
PSO017G2223 Papaver somniferum HOM05D003719 ORTHO05D004116 2.8e-14 83.2 78 55.1
PSO732G0548 Papaver somniferum HOM05D003719 ORTHO05D004116 2.8e-14 83.2 75 56.0
Pp3c9_6410 Physcomitrium patens HOM05D003719 ORTHO05D004116 4.8e-14 82.4 63 50.8
BcaB01g04909 Brassica carinata HOM05D003719 ORTHO05D004116 8.2e-14 81.6 171 36.3
Mapoly0024s0010 Marchantia polymorpha HOM05D003719 ORTHO05D004116 8.2e-14 81.6 96 45.8
PSO675G5773 Papaver somniferum HOM05D003719 ORTHO05D004116 8.2e-14 81.6 75 53.3
Hma1.2p1_0462F.1_g158020 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 1.1e-13 81.3 93 46.2
Lalb_Chr13g0290921 Lupinus albus HOM05D003719 ORTHO05D004116 3.1e-13 79.7 146 40.4
SEGI_39270 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 9.1e-13 78.2 66 53.0
PSO349G0045 Papaver somniferum HOM05D003719 ORTHO05D004116 2.6e-12 76.6 95 45.3
Mapoly0010s0167 Marchantia polymorpha HOM05D003719 ORTHO05D004116 3.5e-12 76.3 96 43.8
arahy.Tifrunner.gnm1.ann1.FLAY3S Arachis hypogaea HOM05D003719 ORTHO05D004116 7.2e-10 68.6 57 47.4
arahy.Tifrunner.gnm1.ann1.RGD672 Arachis hypogaea HOM05D022377 ORTHO05D004116 9.4e-10 68.2 66 43.9
Hund26916 Selenicereus undatus HOM05D003719 ORTHO05D004116 9.4e-10 68.2 64 51.6
PSO732G0588 Papaver somniferum HOM05D003719 ORTHO05D004116 4.7e-09 65.9 61 49.2
arahy.Tifrunner.gnm1.ann1.SX0HJ3 Arachis hypogaea HOM05D022377 ORTHO05D004116 1.0e-08 64.7 80 36.2
C03p09860 Brassica napus HOM05D003719 ORTHO05D004116 1.0e-08 64.7 74 48.6
Prupe.2G107000 Prunus persica HOM05D003719 ORTHO05D004116 1.4e-08 64.3 62 50.0
Aqoxy7G02797 Aquilegia oxysepala HOM05D003719 ORTHO05D004116 2.3e-08 63.5 64 42.2
arahy.Tifrunner.gnm1.ann1.ACR8J8 Arachis hypogaea HOM05D022377 ORTHO05D004116 5.2e-08 62.4 90 34.4
AUR62038028 Chenopodium quinoa HOM05D003719 ORTHO05D004116 2.0e-07 60.5 55 49.1
FAN03G1006 Fragaria x ananassa HOM05D003719 ORTHO05D004116 3.3e-07 59.7 84 45.2
Ca_15283_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 4.4e-07 59.3 81 42.0
Ca_15419_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 4.4e-07 59.3 81 42.0
AUR62014507 Chenopodium quinoa HOM05D003719 ORTHO05D004116 5.7e-07 58.9 55 47.3
TPR.G9173 Trifolium pratense HOM05D000004 ORTHO05D000002 5.7e-07 58.9 52 48.1


User provided reference genes

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