Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00379 Erythranthe guttata HOM05D000919 ORTHO05D004442 1.3e-88 329.7 164 100.0
Migut.H01612 Erythranthe guttata HOM05D000919 ORTHO05D004442 2.1e-27 126.3 123 61.8
MSTRG.14607 Avicennia marina HOM05D000919 ORTHO05D004442 2.2e-24 116.3 123 57.7
Migut.M01412 Erythranthe guttata HOM05D000919 ORTHO05D004442 5.4e-23 111.7 120 57.5
SGA_v2.0_scaffold89G27511 Striga asiatica HOM05D000919 ORTHO05D004442 2.7e-22 109.4 121 54.5
MSTRG.14608 Avicennia marina HOM05D000919 ORTHO05D004442 4.6e-22 108.6 123 52.8
AUR62021842 Chenopodium quinoa HOM05D000919 ORTHO05D004442 4.6e-22 108.6 119 54.6
Gorai.009G183400 Gossypium raimondii HOM05D000919 ORTHO05D004442 1.0e-21 107.5 118 55.1
AT3G02870 Arabidopsis thaliana HOM05D000919 ORTHO05D004442 1.3e-21 107.1 121 52.9
Carub.0003s0197 Capsella rubella HOM05D000919 ORTHO05D004442 1.7e-21 106.7 121 52.9
AL3G12290 Arabidopsis lyrata HOM05D000919 ORTHO05D004442 2.3e-21 106.3 121 52.1
Gohir.A05G175000 Gossypium hirsutum HOM05D000919 ORTHO05D004442 3.9e-21 105.5 118 54.2
Gohir.D05G178000 Gossypium hirsutum HOM05D000919 ORTHO05D004442 3.9e-21 105.5 118 54.2
Sc17g0007840 Simmondsia chinensis HOM05D000919 ORTHO05D004442 3.9e-21 105.5 121 50.4
arahy.Tifrunner.gnm1.ann1.321WPP Arachis hypogaea HOM05D000919 ORTHO05D001187 6.6e-21 104.8 118 54.2
CARHR076880 Cardamine hirsuta HOM05D000919 ORTHO05D004442 6.6e-21 104.8 121 52.1
Actinidia11890 Actinidia chinensis HOM05D000919 ORTHO05D004442 8.6e-21 104.4 118 55.1
Sabra06G0010400 Salix brachista HOM05D000919 ORTHO05D001187 8.6e-21 104.4 119 51.3
SGA_v2.0_scaffold7G03742 Striga asiatica HOM05D000919 ORTHO05D004442 8.6e-21 104.4 120 53.3
Glyma.15G115500 Glycine max HOM05D000919 ORTHO05D004442 1.5e-20 103.6 118 54.2
vmacro15768 Vaccinium macrocarpon HOM05D000919 ORTHO05D004442 1.5e-20 103.6 137 49.6
EL10Ac8g20217 Beta vulgaris HOM05D000919 ORTHO05D004442 1.9e-20 103.2 126 51.6
A03p33170 Brassica napus HOM05D000919 ORTHO05D004442 1.9e-20 103.2 121 52.1
TWI63G1637 Tripterygium wilfordii HOM05D000919 ORTHO05D004442 1.9e-20 103.2 121 53.7
Aa31LG9G12230 Aethionema arabicum HOM05D000919 ORTHO05D004442 2.5e-20 102.8 121 50.4
arahy.Tifrunner.gnm1.ann1.FX3851 Arachis hypogaea HOM05D000919 ORTHO05D004442 2.5e-20 102.8 118 54.2
BcaB04g19381 Brassica carinata HOM05D000919 ORTHO05D004442 2.5e-20 102.8 121 52.1
BcaC05g30500 Brassica carinata HOM05D000919 ORTHO05D004442 2.5e-20 102.8 121 52.9
A05p44240 Brassica napus HOM05D000919 ORTHO05D004442 2.5e-20 102.8 121 52.9
C09p76000 Brassica napus HOM05D000919 ORTHO05D004442 2.5e-20 102.8 121 52.9
BolC5t35057H Brassica oleracea HOM05D000919 ORTHO05D004442 2.5e-20 102.8 121 52.9
BraA06t23281Z Brassica rapa HOM05D000919 ORTHO05D004442 2.5e-20 102.8 121 52.9
Glyma.09G011100 Glycine max HOM05D000919 ORTHO05D004442 2.5e-20 102.8 118 54.2
Phvul.006G142400 Phaseolus vulgaris HOM05D000919 ORTHO05D004442 2.5e-20 102.8 118 53.4
QL05p069171 Quercus lobata HOM05D000919 ORTHO05D004442 3.3e-20 102.4 121 52.1
Sed0006728 Sechium edule HOM05D000919 ORTHO05D004442 3.3e-20 102.4 118 54.2
C03p40360 Brassica napus HOM05D000919 ORTHO05D004442 4.3e-20 102.1 121 51.2
BolC3t16300H Brassica oleracea HOM05D000919 ORTHO05D004442 4.3e-20 102.1 121 51.2
Cc09_g00770 Coffea canephora HOM05D000919 ORTHO05D004442 4.3e-20 102.1 120 51.7
PSO541G5387 Papaver somniferum HOM05D000919 ORTHO05D004442 4.3e-20 102.1 121 50.4
PSO675G7231 Papaver somniferum HOM05D000919 ORTHO05D004442 4.3e-20 102.1 121 50.4
Psat1g175160 Pisum sativum HOM05D000919 ORTHO05D004442 4.3e-20 102.1 124 54.8
MBI16_g42315_MAGBIO Magnolia biondii HOM05D000919 ORTHO05D004442 5.6e-20 101.7 121 50.4
Manes.08G070848 Manihot esculenta HOM05D000919 ORTHO05D004442 5.6e-20 101.7 118 54.2
Hund23401 Selenicereus undatus HOM05D000919 ORTHO05D004442 5.6e-20 101.7 117 53.8
Sc05g0009670 Simmondsia chinensis HOM05D000919 ORTHO05D004442 5.6e-20 101.7 118 53.4
MSTRG.16030 Avicennia marina HOM05D000919 ORTHO05D004442 7.3e-20 101.3 121 52.9
BraA03t12488Z Brassica rapa HOM05D000919 ORTHO05D004442 7.3e-20 101.3 121 51.2
Duzib235G1358 Durio zibethinus HOM05D000919 ORTHO05D004442 7.3e-20 101.3 120 52.5
Lj6g0026420 Lotus japonicus HOM05D000919 ORTHO05D004442 7.3e-20 101.3 114 55.3
Medtr2g026060 Medicago truncatula HOM05D000919 ORTHO05D004442 7.3e-20 101.3 114 56.1
Atru.chr1.2379 Acer truncatum HOM05D000919 ORTHO05D004442 9.5e-20 100.9 121 52.1
Actinidia39274 Actinidia chinensis HOM05D000919 ORTHO05D004442 9.5e-20 100.9 121 52.9
CiPaw.09G103800 Carya illinoinensis HOM05D000919 ORTHO05D004442 9.5e-20 100.9 117 53.0
ClCG01G010540 Citrullus lanatus HOM05D000919 ORTHO05D004442 9.5e-20 100.9 118 53.4
ClCG01G021440 Citrullus lanatus HOM05D000919 ORTHO05D004442 9.5e-20 100.9 121 48.8
Thhalv10021317m.g Eutrema salsugineum HOM05D000919 ORTHO05D004442 9.5e-20 100.9 121 51.2
SalBow8G0659 Salvia bowleyana HOM05D000919 ORTHO05D004442 9.5e-20 100.9 124 51.6
Sp3g01900 Schrenkiella parvula HOM05D000919 ORTHO05D004442 9.5e-20 100.9 121 51.2
THA.LOC104812780 Tarenaya hassleriana HOM05D000919 ORTHO05D004442 9.5e-20 100.9 118 50.0
TPR.G30454 Trifolium pratense HOM05D000919 ORTHO05D001187 9.5e-20 100.9 138 46.4
TAR626G1625 Trochodendron aralioides HOM05D000919 ORTHO05D004442 9.5e-20 100.9 121 51.2
arahy.Tifrunner.gnm1.ann1.NU7K1K Arachis hypogaea HOM05D000919 ORTHO05D004442 1.2e-19 100.5 121 51.2
COL.COLO4_31901 Corchorus olitorius HOM05D000919 ORTHO05D004442 1.2e-19 100.5 118 51.7
MELO3C007440.2 Cucumis melo HOM05D000919 ORTHO05D004442 1.2e-19 100.5 121 48.8
TWI38G0089 Tripterygium wilfordii HOM05D000919 ORTHO05D004442 1.2e-19 100.5 118 55.1
Ah.09g234160 Amaranthus hybridus HOM05D000919 ORTHO05D004442 1.6e-19 100.1 115 53.9
BcaC01g04424 Brassica carinata HOM05D000919 ORTHO05D004442 1.6e-19 100.1 119 51.3
AUR62012811 Chenopodium quinoa HOM05D000919 ORTHO05D004442 1.6e-19 100.1 114 54.4
Gohir.A10G008700 Gossypium hirsutum HOM05D000919 ORTHO05D004442 1.6e-19 100.1 121 49.6
unitig_0.g945 Utricularia gibba HOM05D000919 ORTHO05D004442 1.6e-19 100.1 121 48.8
VMungo0540G1313 Vigna mungo HOM05D000919 ORTHO05D004442 1.6e-19 100.1 118 52.5
CsaV3_1G017100 Cucumis sativus L. HOM05D000919 ORTHO05D004442 2.1e-19 99.8 123 50.4
Duzib160G0724 Durio zibethinus HOM05D000919 ORTHO05D004442 2.1e-19 99.8 118 52.5
Lj4g0009836 Lotus japonicus HOM05D000919 ORTHO05D004442 2.1e-19 99.8 118 51.7
HPP92_001834 Vanilla planifolia HOM05D000919 ORTHO05D004442 2.1e-19 99.8 118 52.5
Cpa.g.sc75.101 Carica papaya HOM05D000919 ORTHO05D004442 2.8e-19 99.4 121 49.6
Gohir.D10G008400 Gossypium hirsutum HOM05D000919 ORTHO05D004442 2.8e-19 99.4 121 49.6
Gorai.011G009200 Gossypium raimondii HOM05D000919 ORTHO05D004442 2.8e-19 99.4 121 49.6
Sed0007397 Sechium edule HOM05D000919 ORTHO05D004442 2.8e-19 99.4 121 49.6
TAR624G0930 Trochodendron aralioides HOM05D000919 ORTHO05D004442 2.8e-19 99.4 128 48.4
Aqoxy1G04034 Aquilegia oxysepala HOM05D000919 ORTHO05D004442 3.6e-19 99.0 121 51.2
SalBow1G3229 Salvia bowleyana HOM05D000919 ORTHO05D004442 3.6e-19 99.0 138 46.4
THA.LOC104815485 Tarenaya hassleriana HOM05D000919 ORTHO05D004442 3.6e-19 99.0 118 51.7
CANSAT56G3845 Cannabis sativa HOM05D000919 ORTHO05D004442 4.7e-19 98.6 119 52.1
Ca_00732_v3 Cicer arietinum L. HOM05D000919 ORTHO05D004442 4.7e-19 98.6 118 54.2
Eucgr.E03917 Eucalyptus grandis HOM05D000919 ORTHO05D004442 4.7e-19 98.6 117 53.0
Lalb_Chr20g0119321 Lupinus albus HOM05D000919 ORTHO05D004442 4.7e-19 98.6 122 50.0
CsaV3_6G048460 Cucumis sativus L. HOM05D000919 ORTHO05D004442 6.2e-19 98.2 122 50.0
FAN21G3460 Fragaria x ananassa HOM05D000919 ORTHO05D004442 6.2e-19 98.2 114 52.6
Lj2C260T11 Lonicera japonica HOM05D000919 ORTHO05D004442 6.2e-19 98.2 118 50.8
Potri.006G014900 Populus trichocarpa HOM05D000919 ORTHO05D004442 6.2e-19 98.2 124 48.4
Thecc.06G234900 Theobroma cacao HOM05D000919 ORTHO05D004442 6.2e-19 98.2 121 48.8
PGSC0003DMG400013285 Solanum tuberosum HOM05D000919 ORTHO05D004442 8.1e-19 97.8 121 49.6
vmacro03634 Vaccinium macrocarpon HOM05D000919 ORTHO05D004442 8.1e-19 97.8 115 53.9
Oeu052871.1 Olea europaea HOM05D000919 ORTHO05D004442 1.1e-18 97.4 119 50.4
Phvul.003G084500 Phaseolus vulgaris HOM05D000919 ORTHO05D004442 1.1e-18 97.4 121 49.6
Rhsim02G0100900 Rhododendron simsii HOM05D000919 ORTHO05D004442 1.1e-18 97.4 132 50.0
Sopen04g006930 Solanum pennellii HOM05D000919 ORTHO05D004442 1.1e-18 97.4 121 51.2
MELO3C025552.2 Cucumis melo HOM05D000919 ORTHO05D004442 1.4e-18 97.1 123 50.4
FAN21G3723 Fragaria x ananassa HOM05D000919 ORTHO05D004442 1.4e-18 97.1 120 51.7
Nitab4.5_0003626g0100 Nicotiana tabacum HOM05D000919 ORTHO05D004442 1.4e-18 97.1 127 50.4
Rhsim13G0144400 Rhododendron simsii HOM05D000919 ORTHO05D004442 1.4e-18 97.1 121 49.6
Sabra16G0014500 Salix brachista HOM05D000919 ORTHO05D001187 1.4e-18 97.1 121 49.6
CSS0012918 Camellia sinensis var. sinensis HOM05D000919 ORTHO05D004442 1.8e-18 96.7 119 53.8
Dinv13975 Davidia involucrata HOM05D000919 ORTHO05D004442 1.8e-18 96.7 118 52.5
ECA232G4869 Erigeron canadensis HOM05D000919 ORTHO05D004442 1.8e-18 96.7 118 51.7
FvH4_3g00781 Fragaria vesca HOM05D000919 ORTHO05D004442 1.8e-18 96.7 114 53.5
FAN25G1217 Fragaria x ananassa HOM05D000919 ORTHO05D004442 1.8e-18 96.7 114 53.5
Potri.010G156300 Populus trichocarpa HOM05D000919 ORTHO05D004442 1.8e-18 96.7 121 50.4
Potri.016G011000 Populus trichocarpa HOM05D000919 ORTHO05D004442 1.8e-18 96.7 121 50.4
Peaxi162Scf00352g00717 Petunia axillaris HOM05D000919 ORTHO05D004442 2.4e-18 96.3 121 50.4
Solyc04g014800.3 Solanum lycopersicum HOM05D000919 ORTHO05D004442 2.4e-18 96.3 121 50.4
Lsat_1_v5_gn_4_63300 Lactuca sativa HOM05D000919 ORTHO05D004442 3.1e-18 95.9 123 48.8
Prupe.4G008700 Prunus persica HOM05D000919 ORTHO05D004442 4.0e-18 95.5 118 50.8
Sopen11g007160 Solanum pennellii HOM05D000919 ORTHO05D004442 4.0e-18 95.5 124 48.4
DCAR_002226 Daucus carota HOM05D000919 ORTHO05D004442 5.2e-18 95.1 118 52.5
HanXRQChr17g0559571 Helianthus annuus HOM05D000919 ORTHO05D004442 5.2e-18 95.1 118 52.5
Nitab4.5_0000143g0120 Nicotiana tabacum HOM05D000919 ORTHO05D004442 5.2e-18 95.1 121 50.4
Nitab4.5_0001109g0070 Nicotiana tabacum HOM05D000919 ORTHO05D004442 5.2e-18 95.1 121 50.4
SEGI_25311 Sequoiadendron giganteum HOM05D000919 ORTHO05D004442 5.2e-18 95.1 114 47.4
RcHm_v2.0_Chr5g0001031 Rosa chinensis HOM05D000919 ORTHO05D004442 6.8e-18 94.7 118 50.8
Solyc11g012410.2 Solanum lycopersicum HOM05D000919 ORTHO05D004442 6.8e-18 94.7 124 48.4
VMungo1215G2620 Vigna mungo HOM05D000919 ORTHO05D004442 6.8e-18 94.7 121 48.8
MD05G1359400 Malus domestica HOM05D000919 ORTHO05D004442 8.9e-18 94.4 118 49.2
Glyma.07G266200 Glycine max HOM05D000919 ORTHO05D004442 1.2e-17 94.0 121 48.8
CiPaw.10G078800 Carya illinoinensis HOM05D000919 ORTHO05D004442 1.5e-17 93.6 121 47.1
Peaxi162Scf00520g00217 Petunia axillaris HOM05D000919 ORTHO05D004442 1.5e-17 93.6 118 49.2
RcHm_v2.0_Chr6g0245961 Rosa chinensis HOM05D000919 ORTHO05D004442 1.5e-17 93.6 118 50.8
TWI63G1766 Tripterygium wilfordii HOM05D000919 ORTHO05D004442 1.5e-17 93.6 124 47.6
Manes.09G076000 Manihot esculenta HOM05D000919 ORTHO05D004442 2.0e-17 93.2 118 50.8
PGSC0003DMG401023603 Solanum tuberosum HOM05D000919 ORTHO05D004442 2.0e-17 93.2 121 49.6
CSS0019004 Camellia sinensis var. sinensis HOM05D000919 ORTHO05D004442 2.6e-17 92.8 118 53.4
HanXRQChr16g0516531 Helianthus annuus HOM05D000919 ORTHO05D004442 2.6e-17 92.8 121 47.1
MD10G1334900 Malus domestica HOM05D000919 ORTHO05D004442 2.6e-17 92.8 118 50.0
Oeu016816.1 Olea europaea HOM05D000919 ORTHO05D004442 2.6e-17 92.8 72 66.7
Potri.010G156500 Populus trichocarpa HOM05D000919 ORTHO05D004442 2.6e-17 92.8 71 69.0
HanXRQChr17g0559551 Helianthus annuus HOM05D000919 ORTHO05D004442 3.4e-17 92.4 118 49.2
SHI24448 Sapria himalayana HOM05D000919 ORTHO05D004442 3.4e-17 92.4 71 69.0
PGSC0003DMG402022924 Solanum tuberosum HOM05D000919 ORTHO05D004442 4.4e-17 92.0 123 48.0
Lj1A1241G68 Lonicera japonica HOM05D000919 ORTHO05D004442 5.8e-17 91.7 71 69.0
Os03g0587000 Oryza sativa ssp. japonica HOM05D000919 ORTHO05D004442 9.9e-17 90.9 117 50.4
ATR0712G014 Amborella trichopoda HOM05D000919 ORTHO05D004442 1.3e-16 90.5 121 46.3
Zm00001eb049310 Zea mays HOM05D000919 ORTHO05D004442 1.7e-16 90.1 119 50.4
CAN.G696.22 Capsicum annuum HOM05D000919 ORTHO05D004442 2.2e-16 89.7 71 67.6
PGR042G3907 Punica granatum HOM05D000919 ORTHO05D004442 2.2e-16 89.7 119 45.4
CDE04G0895 Ceratophyllum demersum HOM05D000919 ORTHO05D004442 3.8e-16 89.0 117 47.0
ECA248G0498 Erigeron canadensis HOM05D000919 ORTHO05D004442 3.8e-16 89.0 71 66.2
Sopen03g009180 Solanum pennellii HOM05D000919 ORTHO05D004442 8.4e-16 87.8 122 47.5
Nn1g03275 Nelumbo nucifera HOM05D000919 ORTHO05D004442 1.4e-15 87.0 71 66.2
Solyc03g044890.1 Solanum lycopersicum HOM05D000919 ORTHO05D004442 3.2e-15 85.9 118 47.5
Nitab4.5_0005614g0020 Nicotiana tabacum HOM05D000919 ORTHO05D004442 7.1e-15 84.7 120 47.5
AagrBONN_evm.TU.Sc2ySwM_228.1965 Anthoceros agrestis HOM05D000919 ORTHO05D004442 1.2e-14 84.0 73 61.6
Migut.K01249 Erythranthe guttata HOM05D000919 ORTHO05D004442 6.0e-14 81.6 52 73.1
Pp3c21_5760 Physcomitrium patens HOM05D000919 ORTHO05D004442 7.8e-14 81.3 119 45.4
Pp3c19_6880 Physcomitrium patens HOM05D000919 ORTHO05D004442 6.6e-13 78.2 117 42.7
Cc09_g00720 Coffea canephora HOM05D000919 ORTHO05D004442 1.9e-12 76.6 120 41.7
PRCOL_00004145 Prasinoderma coloniale HOM05D000919 ORTHO05D004442 1.9e-12 76.6 71 59.2
CBR_g49488 Chara braunii HOM05D004870 ORTHO05D006061 4.3e-12 75.5 119 41.2
SEGI_33980 Sequoiadendron giganteum HOM05D000919 ORTHO05D004442 7.3e-12 74.7 111 42.3
Pp3c22_4630 Physcomitrium patens HOM05D000919 ORTHO05D004442 9.6e-12 74.3 120 41.7
BolC3t16302H Brassica oleracea HOM05D000930 ORTHO05D000748 3.6e-11 72.4 118 39.8
MCO09G192 Micromonas commoda HOM05D000919 ORTHO05D004442 3.6e-11 72.4 73 54.8
SMO265G0053 Selaginella moellendorffii HOM05D000919 ORTHO05D004442 2.4e-10 69.7 131 42.7
Mapoly0002s0010 Marchantia polymorpha HOM05D000919 ORTHO05D004442 4.0e-10 68.9 72 52.8
Cre06.g278202 Chlamydomonas reinhardtii HOM05D000919 ORTHO05D004442 5.2e-10 68.6 115 42.6
Haze_06946 Corylus avellana HOM05D000919 ORTHO05D004442 1.2e-09 67.4 36 80.6
Migut.G01054 Erythranthe guttata HOM05D000919 ORTHO05D004442 1.2e-09 67.4 33 90.9
SMO143G0032 Selaginella moellendorffii HOM05D000919 ORTHO05D004442 2.6e-09 66.2 36 83.3
C03p40380 Brassica napus HOM05D000387 ORTHO05D000748 4.4e-09 65.5 121 37.2
Haze_26303 Corylus avellana HOM05D000919 ORTHO05D004442 2.4e-07 59.7 122 32.8


User provided reference genes

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