Gene: Sopen11g007160
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g007160
- Transcript Identifier Sopen11g007160.1
- Gene Type Coding gene
- Location Spenn-ch11 : 5304053-5307987 : positive
Gene Family Information
- ID HOM05D000919
- #Genes/#Species 655/100
- Phylogenetic origin
- ID ORTHO05D004442
- #Genes/#Species 180/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen11g007160.1
Descriptions
- Description Encodes a L-galactose-1-phosphate phosphatase, involved in ascorbate biosynthesis. | VTC4 | FUNCTIONS IN: 3(2),5-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity | INVOLVED IN: sulfur metabolic process, L-ascorbic acid biosynthetic process, response to karrikin, response to cold, inositol biosynthetic process | LOCATED IN: plasma membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site , Inositol monophosphatase , Inositol monophosphatase, Lithium-sensitive , Inositol monophosphatase, metal-binding site | BEST Arabidopsis thaliana protein match is: myo-inositol monophosphatase like 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0046855 | IEA | InterPro | inositol phosphate dephosphorylation | |
GO:0046854 | IEA | InterPro | phosphatidylinositol phosphate biosynthetic process | |
GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT3G02870 |
GO:0006021 | ISO | PLAZA Integrative Orthology | inositol biosynthetic process | Solyc11g012410.2 |
GO:0080167 | ISO | PLAZA Integrative Orthology | response to karrikin | AT3G02870 |
GO:0019853 | ISO | PLAZA Integrative Orthology | L-ascorbic acid biosynthetic process | AT3G02870 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0008934 | IEA | InterPro | inositol monophosphate 1-phosphatase activity | |
GO:0000287 | ISO | PLAZA Integrative Orthology | magnesium ion binding | Solyc11g012410.2 |
GO:0010347 | ISO | PLAZA Integrative Orthology | L-galactose-1-phosphate phosphatase activity | AT3G02870 |
GO:0052834 | ISO | PLAZA Integrative Orthology | inositol monophosphate phosphatase activity | Solyc11g012410.2 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G02870 |
GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G02870 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
10.5.6.1.6 | Redox homeostasis.ascorbate-based redox regulation.ascorbate metabolism.L-galactose biosynthesis pathway.L-galactose-1-phosphate phosphatase (VTC4) |
27.5.2.1 | Multi-process regulation.phosphatidylinositol and inositol phosphate system.degradation.myo-inositol-1-phosphate phosphatase |