Gene: AT3G02870

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G02870
  • Transcript Identifier AT3G02870.1
  • Gene Type Coding gene
  • Location Chr3 : 627742-629682 : negative

Gene Family Information

  • ID HOM05D000919
  • #Genes/#Species 655/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G02870.1
  • symbol VTC4
  • uniprot Q9M8S8

Descriptions

  • Description Inositol monophosphatase family protein
  • Computational description VTC4; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, L-ascorbic acid biosynthetic process, response to karrikin, response to cold, inositol biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583), Inositol monophosphatase, Lithium-sensitive (InterPro:IPR020552); BEST Arabidopsis thaliana protein match is: myo-inositol monophosphatase like 1 (TAIR:AT1G31190.1); Has 16249 Blast hits to 16237 proteins in 2366 species: Archae - 250; Bacteria - 8645; Metazoa - 648; Fungi - 322; Plants - 290; Viruses - 0; Other Eukaryotes - 6094 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046855
IBA
IEA
Gene Ontologyinositol phosphate dephosphorylation1
GO:0046855
IEA
InterProinositol phosphate dephosphorylation
GO:0046854
IEA
Gene Ontologyphosphatidylinositol phosphate biosynthetic process
GO:0046854
IEA
InterProphosphatidylinositol phosphate biosynthetic process
GO:0080167
IEP
GOA Databaseresponse to karrikin
GO:0006020
IBA
Gene Ontologyinositol metabolic process1
GO:0007165
IBA
Gene Ontologysignal transduction1
GO:0009409
IMP
Gene Ontologyresponse to cold2
GO:0006021
IMP
IEA
Gene Ontologyinositol biosynthetic process2
GO:0019853
IMP
Gene OntologyL-ascorbic acid biosynthetic process3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000287
ISO
PLAZA Integrative Orthologymagnesium ion binding Solyc11g012410.2
GO:0008934
IDA
IBA
IEA
Gene Ontologyinositol monophosphate 1-phosphatase activity1 2
GO:0008934
IEA
InterProinositol monophosphate 1-phosphatase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0010347
IEA
GOA DatabaseL-galactose-1-phosphate phosphatase activity
GO:0010347
IDA, IMP
Gene OntologyL-galactose-1-phosphate phosphatase activity3 4
GO:0052834
IEA
GOA Databaseinositol monophosphate phosphatase activity
GO:0052833
IEA
Gene Ontologyinositol monophosphate 4-phosphatase activity
GO:0052832
IEA
Gene Ontologyinositol monophosphate 3-phosphatase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
HDA
Gene Ontologycytosol5
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane6
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000760 Inositol monophosphatase-like
IPR033942 Inositol monophosphatase
IPR020552 Inositol monophosphatase, lithium-sensitive
Mapman id Description
10.5.6.1.6 Redox homeostasis.ascorbate-based redox regulation.ascorbate metabolism.L-galactose biosynthesis pathway.L-galactose-1-phosphate phosphatase (VTC4)
27.5.2.1 Multi-process regulation.phosphatidylinositol and inositol phosphate system.degradation.myo-inositol-1-phosphate phosphatase