Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01815 Erythranthe guttata HOM05D006268 ORTHO05D008118 6.6e-193 677.2 334 100.0
MSTRG.4977 Avicennia marina HOM05D006268 ORTHO05D008118 1.7e-148 529.6 340 78.8
SalBow4G0743 Salvia bowleyana HOM05D006268 ORTHO05D008118 1.9e-139 499.6 340 73.5
DCAR_029548 Daucus carota HOM05D006268 ORTHO05D008118 7.4e-136 487.6 335 72.2
Actinidia33290 Actinidia chinensis HOM05D006268 ORTHO05D008118 1.4e-134 483.4 343 71.1
Rhsim01G0145800 Rhododendron simsii HOM05D006268 ORTHO05D008118 1.4e-134 483.4 336 71.1
vmacro21105 Vaccinium macrocarpon HOM05D006268 ORTHO05D008118 2.6e-133 479.2 336 69.9
CSS0005578 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 3.8e-132 475.3 337 70.0
GSVIVG01016051001 Vitis vinifera HOM05D006268 ORTHO05D008118 5.5e-131 471.5 332 70.8
TAR375G0229 Trochodendron aralioides HOM05D006268 ORTHO05D008118 1.6e-130 469.9 331 69.8
Nitab4.5_0001209g0060 Nicotiana tabacum HOM05D006268 ORTHO05D008118 4.3e-128 461.8 335 69.6
Solyc01g080940.3 Solanum lycopersicum HOM05D006268 ORTHO05D008118 1.8e-126 456.4 335 68.7
HanXRQChr04g0123661 Helianthus annuus HOM05D006268 ORTHO05D008118 3.1e-126 455.7 331 68.3
PGSC0003DMG400001820 Solanum tuberosum HOM05D006268 ORTHO05D008118 3.1e-126 455.7 335 68.4
Sopen01g032530 Solanum pennellii HOM05D006268 ORTHO05D008118 5.3e-126 454.9 335 69.0
unitig_22.g5778 Utricularia gibba HOM05D006268 ORTHO05D008118 1.2e-125 453.8 338 68.3
CAN.G1551.1 Capsicum annuum HOM05D006268 ORTHO05D008118 3.4e-125 452.2 335 67.5
Cc02_g26120 Coffea canephora HOM05D006268 ORTHO05D008118 5.9e-125 451.4 337 68.2
Cfa010996 Carpinus fangiana HOM05D006268 ORTHO05D008118 2.9e-124 449.1 333 67.6
Nitab4.5_0001476g0040 Nicotiana tabacum HOM05D006268 ORTHO05D008118 2.9e-124 449.1 335 67.5
CANSAT54G1338 Cannabis sativa HOM05D006268 ORTHO05D008118 6.5e-124 448.0 335 67.5
MD00G1098400 Malus domestica HOM05D006268 ORTHO05D008118 3.2e-123 445.7 331 66.5
PGR083G0810 Punica granatum HOM05D006268 ORTHO05D008118 7.2e-123 444.5 332 67.2
Haze_02942 Corylus avellana HOM05D006268 ORTHO05D008118 1.6e-122 443.4 333 67.3
Lj3g0019214 Lotus japonicus HOM05D006268 ORTHO05D008118 1.6e-122 443.4 331 66.5
TWI59G0917 Tripterygium wilfordii HOM05D006268 ORTHO05D008118 2.1e-122 443.0 338 66.9
Gorai.N008000 Gossypium raimondii HOM05D006268 ORTHO05D008118 2.7e-122 442.6 331 68.9
Nn1g00551 Nelumbo nucifera HOM05D006268 ORTHO05D008118 2.7e-122 442.6 332 67.2
CiPaw.13G019100 Carya illinoinensis HOM05D006268 ORTHO05D008118 4.6e-122 441.8 332 67.2
Gohir.A06G169600 Gossypium hirsutum HOM05D006268 ORTHO05D008118 7.9e-122 441.0 335 68.1
MELO3C006233.2 Cucumis melo HOM05D006268 ORTHO05D008118 1.0e-121 440.7 340 66.5
Potri.002G238300 Populus trichocarpa HOM05D006268 ORTHO05D008118 1.0e-121 440.7 330 66.4
Psat4g207400 Pisum sativum HOM05D006268 ORTHO05D008118 2.3e-121 439.5 338 65.1
Aqoxy3G02409 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 5.1e-121 438.3 332 65.7
Aqoxy3G02437 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 5.1e-121 438.3 332 65.7
Sed0013667 Sechium edule HOM05D006268 ORTHO05D008118 6.7e-121 438.0 331 65.9
Sabra02G0181600 Salix brachista HOM05D006268 ORTHO05D008118 1.5e-120 436.8 327 66.4
Ca_23170_v3 Cicer arietinum L. HOM05D006268 ORTHO05D008118 2.5e-120 436.0 331 65.0
FAN03G0807 Fragaria x ananassa HOM05D006268 ORTHO05D008118 4.3e-120 435.3 333 66.1
Sc26g0001930 Simmondsia chinensis HOM05D006268 ORTHO05D008118 4.3e-120 435.3 333 65.2
CsaV3_3G010120 Cucumis sativus L. HOM05D006268 ORTHO05D008118 5.7e-120 434.9 332 66.6
FvH4_7g08020 Fragaria vesca HOM05D006268 ORTHO05D008118 9.7e-120 434.1 332 66.3
Lalb_Chr07g0194551 Lupinus albus HOM05D006268 ORTHO05D008118 9.7e-120 434.1 332 64.8
FAN06G0712 Fragaria x ananassa HOM05D006268 ORTHO05D008118 1.3e-119 433.7 333 66.1
Lsat_1_v5_gn_7_10860 Lactuca sativa HOM05D006268 ORTHO05D008118 1.3e-119 433.7 329 67.2
Glyma.03G093200 Glycine max HOM05D006268 ORTHO05D008118 4.8e-119 431.8 328 64.0
Glyma.16G080700 Glycine max HOM05D006268 ORTHO05D008118 6.3e-119 431.4 330 63.6
RcHm_v2.0_Chr1g0341291 Rosa chinensis HOM05D006268 ORTHO05D008118 8.2e-119 431.0 332 65.7
EL10Ac1g00692 Beta vulgaris HOM05D006268 ORTHO05D008118 2.4e-118 429.5 334 64.1
Duzib128G0100 Durio zibethinus HOM05D006268 ORTHO05D008118 2.4e-118 429.5 348 63.5
Thecc.03G001300 Theobroma cacao HOM05D006268 ORTHO05D008118 3.1e-118 429.1 330 67.0
Eucgr.D01130 Eucalyptus grandis HOM05D006268 ORTHO05D008118 9.1e-118 427.6 332 64.5
CSS0033423 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 1.2e-117 427.2 337 64.4
COL.COLO4_19510 Corchorus olitorius HOM05D006268 ORTHO05D006513 2.6e-117 426.0 331 65.9
Prupe.2G109200 Prunus persica HOM05D006268 ORTHO05D008118 1.0e-116 424.1 330 63.6
PSO063G1446 Papaver somniferum HOM05D006268 ORTHO05D008118 1.3e-116 423.7 332 62.7
PSO782G1498 Papaver somniferum HOM05D006268 ORTHO05D008118 1.7e-116 423.3 332 62.3
VMungo0331G0592 Vigna mungo HOM05D006268 ORTHO05D008118 2.2e-116 422.9 329 62.3
QL04p024264 Quercus lobata HOM05D006268 ORTHO05D008118 2.9e-116 422.5 355 61.4
AUR62023342 Chenopodium quinoa HOM05D006268 ORTHO05D008118 8.5e-116 421.0 334 62.9
Phvul.010G033866 Phaseolus vulgaris HOM05D006268 ORTHO05D008118 1.1e-115 420.6 329 62.3
Ah.06g189690 Amaranthus hybridus HOM05D006268 ORTHO05D008118 9.4e-115 417.5 346 61.0
Ciclev10021110m.g Citrus clementina HOM05D006268 ORTHO05D008118 9.4e-115 417.5 338 62.4
Medtr8g010550 Medicago truncatula HOM05D006268 ORTHO05D008118 1.1e-112 410.6 341 60.4
FAN01G0355 Fragaria x ananassa HOM05D006268 ORTHO05D008118 3.3e-112 409.1 377 57.8
Atru.BG.53.p Acer truncatum HOM05D006268 ORTHO05D008118 4.1e-110 402.1 320 66.9
ClCG05G002670 Citrullus lanatus HOM05D006268 ORTHO05D008118 5.3e-110 401.7 340 61.5
Hund26937 Selenicereus undatus HOM05D006268 ORTHO05D008118 1.6e-109 400.2 343 60.3
THA.LOC104799599 Tarenaya hassleriana HOM05D006268 ORTHO05D008118 7.5e-104 381.3 333 59.2
ATR0049G059 Amborella trichopoda HOM05D006268 ORTHO05D008118 3.1e-102 375.9 338 58.0
BcaC03g14111 Brassica carinata HOM05D006268 ORTHO05D008118 9.1e-102 374.4 326 59.8
arahy.Tifrunner.gnm1.ann1.EHLP6C Arachis hypogaea HOM05D006268 ORTHO05D008118 1.2e-101 374.0 339 57.2
C02p13500 Brassica napus HOM05D006268 ORTHO05D008118 1.6e-101 373.6 326 59.8
BolC2t07462H Brassica oleracea HOM05D006268 ORTHO05D008118 1.6e-101 373.6 326 59.8
BcaB05g22409 Brassica carinata HOM05D006268 ORTHO05D008118 2.0e-101 373.2 326 58.9
arahy.Tifrunner.gnm1.ann1.V3PJPX Arachis hypogaea HOM05D006268 ORTHO05D008118 4.5e-101 372.1 339 56.9
Thhalv10014126m.g Eutrema salsugineum HOM05D006268 ORTHO05D008118 4.5e-101 372.1 328 59.1
Manes.08G055700 Manihot esculenta HOM05D006268 ORTHO05D008118 1.7e-100 370.2 292 65.8
Aa31LG11G10 Aethionema arabicum HOM05D006268 ORTHO05D008118 5.0e-100 368.6 339 56.3
A02p07860 Brassica napus HOM05D006268 ORTHO05D008118 6.5e-100 368.2 326 58.6
BraA02t05859Z Brassica rapa HOM05D006268 ORTHO05D008118 1.1e-99 367.5 326 58.6
TPR.G9770 Trifolium pratense HOM05D006268 ORTHO05D008118 1.1e-99 367.5 334 57.2
AUR62013813 Chenopodium quinoa HOM05D006268 ORTHO05D008118 2.5e-99 366.3 329 57.4
ECA236G2174 Erigeron canadensis HOM05D006268 ORTHO05D008118 9.4e-99 364.4 315 59.7
Os03g0390700 Oryza sativa ssp. japonica HOM05D006268 ORTHO05D008118 2.1e-98 363.2 324 57.7
HPP92_028001 Vanilla planifolia HOM05D006268 ORTHO05D008118 6.1e-98 361.7 327 55.7
Zm00001eb392560 Zea mays HOM05D006268 ORTHO05D008118 5.7e-96 355.1 333 55.9
AL8G34320 Arabidopsis lyrata HOM05D006268 ORTHO05D008118 2.2e-95 353.2 332 57.2
CARHR272020 Cardamine hirsuta HOM05D006268 ORTHO05D008118 4.1e-94 349.0 328 54.3
SEGI_16160 Sequoiadendron giganteum HOM05D006268 ORTHO05D008118 5.9e-93 345.1 350 52.6
Sp6g19880 Schrenkiella parvula HOM05D006268 ORTHO05D008118 7.7e-93 344.7 328 55.5
AT5G58220 Arabidopsis thaliana HOM05D006268 ORTHO05D008118 1.9e-91 340.1 328 55.2
Dinv43994 Davidia involucrata HOM05D006268 ORTHO05D008118 5.5e-91 338.6 243 70.8
Carub.0008s1876 Capsella rubella HOM05D006268 ORTHO05D008118 1.6e-90 337.0 328 54.9
FAN10G2079 Fragaria x ananassa HOM05D006268 ORTHO05D008118 9.8e-88 327.8 303 58.4
SGA_v2.0_scaffold95G28736 Striga asiatica HOM05D006268 ORTHO05D008118 1.6e-85 320.5 247 67.2
CDE04G2879 Ceratophyllum demersum HOM05D006268 ORTHO05D008118 1.2e-77 294.3 275 56.4
Pp3c4_10360 Physcomitrium patens HOM05D006268 ORTHO05D008118 2.7e-77 293.1 335 50.4
SMO367G0371 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 7.8e-77 291.6 355 44.2
Lj7C555G14 Lonicera japonica HOM05D006268 ORTHO05D008118 7.0e-70 268.5 183 73.8
Mapoly0090s0043 Marchantia polymorpha HOM05D006268 ORTHO05D008118 1.0e-68 264.6 334 44.6
CBR_g30589 Chara braunii HOM05D006268 ORTHO05D008118 5.2e-65 252.3 465 35.7
AagrBONN_evm.TU.Sc2ySwM_228.2734 Anthoceros agrestis HOM05D006268 ORTHO05D008118 4.6e-61 239.2 311 43.1
Cre17.g735950 Chlamydomonas reinhardtii HOM05D006268 ORTHO05D008118 1.1e-57 228.0 342 38.3
DCAR_025012 Daucus carota HOM05D006268 ORTHO05D008118 4.1e-54 216.1 167 67.1
PRCOL_00004243 Prasinoderma coloniale HOM05D006268 ORTHO05D008118 2.1e-53 213.8 332 40.7
Lj7C555T10 Lonicera japonica HOM05D006268 ORTHO05D008118 2.8e-50 203.4 149 67.1
BcaB05g22411 Brassica carinata HOM05D006268 ORTHO05D008118 6.9e-49 198.7 187 56.1
Cpa.g.sc74.89 Carica papaya HOM05D006268 ORTHO05D008118 2.4e-41 173.7 183 52.5
SMO367G0431 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 1.3e-36 157.9 159 49.7
SMO197G0011 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 1.9e-35 154.1 147 52.4
SHI28983 Sapria himalayana HOM05D006268 ORTHO05D008118 2.8e-34 150.2 160 48.8
Sc26g0001910 Simmondsia chinensis HOM05D006268 ORTHO05D008118 2.4e-33 147.1 132 57.6
MCO07G440 Micromonas commoda HOM05D006268 ORTHO05D008118 8.4e-31 138.7 150 47.3
Oeu050272.1 Olea europaea HOM05D006268 ORTHO05D008118 1.2e-29 134.8 79 77.2
BolC9t57859H Brassica oleracea HOM05D006268 ORTHO05D008118 6.2e-26 122.5 81 72.8
Hma1.2p1_0076F.1_g039600 Hydrangea macrophylla HOM05D006268 ORTHO05D008118 7.9e-21 105.5 65 72.3
MCO05G065 Micromonas commoda HOM05D006268 ORTHO05D008118 2.8e-18 97.1 132 41.7
Cfa010995 Carpinus fangiana HOM05D006268 ORTHO05D008118 4.6e-13 79.7 58 63.8
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 3.9e-12 76.6 81 49.4
MD02G1236900 Malus domestica HOM05D006268 ORTHO05D008118 8.7e-12 75.5 135 39.3
BcaC04g19902 Brassica carinata HOM05D006268 ORTHO05D008118 1.9e-11 74.3 57 63.2
Dinv43550 Davidia involucrata HOM05D006268 ORTHO05D008118 3.7e-10 70.1 58 65.5
SGA_v2.0_scaffold7G03663 Striga asiatica HOM05D000015 ORTHO05D000984 1.0e-07 62.0 35 82.9
Ca_29090_v3 Cicer arietinum L. HOM05D000582 ORTHO05D034183 5.0e-07 59.7 110 32.7
Dinv43551 Davidia involucrata HOM05D006268 ORTHO05D180404 9.4e-06 55.5 75 45.3


User provided reference genes

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