Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00865 Erythranthe guttata HOM05D005817 ORTHO05D007140 3.0e-168 595.1 306 100.0
SGA_v2.0_scaffold8G04460 Striga asiatica HOM05D005817 ORTHO05D007140 1.2e-127 460.3 302 78.8
Oeu028475.1 Olea europaea HOM05D005817 ORTHO05D007140 4.3e-122 441.8 307 75.9
Oeu028476.1 Olea europaea HOM05D005817 ORTHO05D007140 7.3e-122 441.0 307 75.9
Nitab4.5_0007689g0010 Nicotiana tabacum HOM05D005817 ORTHO05D007140 1.3e-115 420.2 306 71.9
Cc02_g23610 Coffea canephora HOM05D005817 ORTHO05D007140 1.9e-114 416.4 306 71.6
Prupe.1G585700 Prunus persica HOM05D005817 ORTHO05D007140 1.4e-112 410.2 302 72.2
Hma1.2p1_0052F.1_g030020 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 1.2e-111 407.1 304 70.4
Actinidia01635 Actinidia chinensis HOM05D005817 ORTHO05D007140 2.0e-111 406.4 301 71.8
Solyc01g103020.4 Solanum lycopersicum HOM05D005817 ORTHO05D007140 3.4e-111 405.6 299 70.9
MD08G1248300 Malus domestica HOM05D005817 ORTHO05D007140 9.8e-111 404.1 302 70.2
QL02p103359 Quercus lobata HOM05D005817 ORTHO05D007140 9.8e-111 404.1 299 71.2
PGSC0003DMG400020713 Solanum tuberosum HOM05D005817 ORTHO05D007140 1.3e-110 403.7 299 70.6
CSS0044256 Camellia sinensis var. sinensis HOM05D005817 ORTHO05D007140 2.2e-110 402.9 304 70.4
CANSAT01G0715 Cannabis sativa HOM05D005817 ORTHO05D007140 3.7e-110 402.1 307 70.7
HanXRQChr15g0469671 Helianthus annuus HOM05D005817 ORTHO05D007140 3.7e-110 402.1 307 70.4
CAN.G855.54 Capsicum annuum HOM05D005817 ORTHO05D007140 4.1e-109 398.7 299 70.9
CiPaw.06G176700 Carya illinoinensis HOM05D005817 ORTHO05D007140 1.2e-108 397.1 299 70.6
Lsat_1_v5_gn_9_83341 Lactuca sativa HOM05D005817 ORTHO05D007140 6.0e-108 394.8 306 69.3
TWI14G0757 Tripterygium wilfordii HOM05D005817 ORTHO05D007140 3.0e-107 392.5 301 69.8
MD15G1443200 Malus domestica HOM05D005817 ORTHO05D007140 3.9e-107 392.1 310 67.7
Phvul.003G075900 Phaseolus vulgaris HOM05D005817 ORTHO05D007140 3.9e-107 392.1 297 69.7
unitig_22.g6849 Utricularia gibba HOM05D005817 ORTHO05D007140 3.9e-107 392.1 336 64.9
Ca_13529_v3 Cicer arietinum L. HOM05D005817 ORTHO05D007140 5.1e-107 391.7 297 68.7
Lalb_Chr07g0176811 Lupinus albus HOM05D005817 ORTHO05D007140 1.1e-106 390.6 300 68.0
RcHm_v2.0_Chr7g0219661 Rosa chinensis HOM05D005817 ORTHO05D007140 1.1e-106 390.6 302 68.5
Nn5g27184 Nelumbo nucifera HOM05D005817 ORTHO05D007140 1.5e-106 390.2 299 70.2
Rhsim05G0115500 Rhododendron simsii HOM05D005817 ORTHO05D007140 2.5e-106 389.4 350 61.7
PSO017G5300 Papaver somniferum HOM05D005817 ORTHO05D007140 3.3e-106 389.0 300 69.7
PGR142G3472 Punica granatum HOM05D005817 ORTHO05D007140 5.6e-106 388.3 301 68.4
CsaV3_5G027420 Cucumis sativus L. HOM05D005817 ORTHO05D007140 9.5e-106 387.5 294 70.1
Eucgr.I02797 Eucalyptus grandis HOM05D005817 ORTHO05D007140 1.2e-105 387.1 302 67.5
Lj4g0018327 Lotus japonicus HOM05D005817 ORTHO05D007140 1.2e-105 387.1 298 68.1
PSO170G5162 Papaver somniferum HOM05D005817 ORTHO05D007140 2.1e-105 386.3 300 69.0
TPR.G6004 Trifolium pratense HOM05D005817 ORTHO05D007140 2.8e-105 386.0 301 68.1
TAR628G1209 Trochodendron aralioides HOM05D005817 ORTHO05D007140 6.2e-105 384.8 296 68.9
Glyma.07G272500 Glycine max HOM05D005817 ORTHO05D007140 1.4e-104 383.6 298 67.8
Thecc.06G019900 Theobroma cacao HOM05D005817 ORTHO05D007140 1.4e-104 383.6 302 69.2
arahy.Tifrunner.gnm1.ann1.86KQ48 Arachis hypogaea HOM05D005817 ORTHO05D007140 1.8e-104 383.3 317 65.6
Psat4g000960 Pisum sativum HOM05D005817 ORTHO05D007140 2.3e-104 382.9 295 67.8
Sp2g13800 Schrenkiella parvula HOM05D005817 ORTHO05D007140 3.1e-104 382.5 305 67.2
Aqoxy6G00025 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 4.0e-104 382.1 299 69.6
arahy.Tifrunner.gnm1.ann1.NEQE4P Arachis hypogaea HOM05D005817 ORTHO05D007140 5.2e-104 381.7 317 65.3
Ciclev10002025m.g Citrus clementina HOM05D005817 ORTHO05D007140 5.2e-104 381.7 299 68.9
TAR376G0556 Trochodendron aralioides HOM05D005817 ORTHO05D007140 5.2e-104 381.7 299 69.2
Medtr4g134630 Medicago truncatula HOM05D005817 ORTHO05D007140 6.8e-104 381.3 295 66.8
Gohir.D06G122800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 8.9e-104 380.9 298 68.5
Duzib160G0844 Durio zibethinus HOM05D005817 ORTHO05D007140 1.2e-103 380.6 299 68.6
Sabra01G0174300 Salix brachista HOM05D005817 ORTHO05D007140 1.5e-103 380.2 316 66.1
Gorai.010G142900 Gossypium raimondii HOM05D005817 ORTHO05D007140 2.6e-103 379.4 298 68.1
FvH4_5g27830 Fragaria vesca HOM05D005817 ORTHO05D007140 3.4e-103 379.0 302 65.6
CDE07G1199 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 5.8e-103 378.3 298 70.5
FAN18G1253 Fragaria x ananassa HOM05D005817 ORTHO05D007140 5.8e-103 378.3 302 65.6
Thhalv10004677m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 7.5e-103 377.9 305 67.2
EL10Ac6g13990 Beta vulgaris HOM05D005817 ORTHO05D007140 2.2e-102 376.3 299 65.9
Carub.0005s0157 Capsella rubella HOM05D005817 ORTHO05D007140 2.9e-102 375.9 303 67.3
Gohir.A06G115800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 2.9e-102 375.9 298 67.8
vmacro19830 Vaccinium macrocarpon HOM05D005817 ORTHO05D007140 2.9e-102 375.9 283 70.3
THA.LOC104824089 Tarenaya hassleriana HOM05D005817 ORTHO05D007140 3.2e-101 372.5 302 67.5
Lj9C259G5 Lonicera japonica HOM05D001465 ORTHO05D001434 5.4e-101 371.7 283 71.4
Ah.03g136770 Amaranthus hybridus HOM05D005817 ORTHO05D007140 7.1e-101 371.3 316 64.2
COL.COLO4_31118 Corchorus olitorius HOM05D005817 ORTHO05D007140 7.1e-101 371.3 333 64.0
Atru.chr6.226 Acer truncatum HOM05D005817 ORTHO05D007140 2.7e-100 369.4 299 67.9
BcaC06g31224 Brassica carinata HOM05D005817 ORTHO05D007140 1.3e-99 367.1 309 66.3
Sed0006174 Sechium edule HOM05D005817 ORTHO05D007140 1.7e-99 366.7 297 66.3
ATR1089G128 Amborella trichopoda HOM05D005817 ORTHO05D007140 2.3e-99 366.3 300 65.3
Haze_09983 Corylus avellana HOM05D005817 ORTHO05D007140 8.6e-99 364.4 366 57.9
Peaxi162Scf00011g01920 Petunia axillaris HOM05D005817 ORTHO05D007140 4.3e-98 362.1 340 59.7
CDE08G0344 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 5.6e-98 361.7 298 66.4
AT2G02570 Arabidopsis thaliana HOM05D005817 ORTHO05D007140 7.3e-98 361.3 303 63.7
C07p33290 Brassica napus HOM05D005817 ORTHO05D007140 7.3e-98 361.3 303 67.0
BolC7t43840H Brassica oleracea HOM05D005817 ORTHO05D007140 7.3e-98 361.3 303 67.0
A06p43560 Brassica napus HOM05D005817 ORTHO05D007140 6.2e-97 358.2 303 67.3
BcaC03g17157 Brassica carinata HOM05D005817 ORTHO05D007140 9.9e-95 350.9 303 64.4
Hund15375 Selenicereus undatus HOM05D005817 ORTHO05D007140 1.7e-94 350.1 272 69.1
BraA06t27241Z Brassica rapa HOM05D005817 ORTHO05D007140 8.4e-94 347.8 329 62.3
ECA236G3641 Erigeron canadensis HOM05D000284 ORTHO05D000805 1.1e-93 347.4 279 67.7
FAN04G1604 Fragaria x ananassa HOM05D005817 ORTHO05D007140 1.4e-93 347.1 370 53.5
GSVIVG01023145001 Vitis vinifera HOM05D005817 ORTHO05D007140 6.6e-91 338.2 258 71.3
AUR62043876 Chenopodium quinoa HOM05D005817 ORTHO05D007140 8.7e-91 337.8 278 65.1
C02p50820 Brassica napus HOM05D005817 ORTHO05D007140 1.5e-90 337.0 299 63.2
Potri.004G229200 Populus trichocarpa HOM05D005817 ORTHO05D007140 3.3e-90 335.9 251 71.3
MSTRG.27880 Avicennia marina HOM05D005817 ORTHO05D007140 1.6e-89 333.6 232 76.7
BolC2t11164H Brassica oleracea HOM05D005817 ORTHO05D007140 2.1e-89 333.2 302 62.3
Dinv29679 Davidia involucrata HOM05D005817 ORTHO05D007140 3.6e-89 332.4 257 69.6
FAN08G2336 Fragaria x ananassa HOM05D005817 ORTHO05D007140 1.4e-88 330.5 371 52.3
Glyma.17G001900 Glycine max HOM05D005817 ORTHO05D007140 1.4e-88 330.5 255 68.6
ClCG11G000310 Citrullus lanatus HOM05D005817 ORTHO05D007140 1.5e-87 327.0 309 60.8
Sopen01g045430 Solanum pennellii HOM05D005817 ORTHO05D007140 2.0e-87 326.6 231 71.9
Aa31LG2G7570 Aethionema arabicum HOM05D005817 ORTHO05D007140 1.3e-86 323.9 326 56.4
Manes.07G030600 Manihot esculenta HOM05D005817 ORTHO05D007140 4.9e-86 322.0 251 68.5
Manes.10G106400 Manihot esculenta HOM05D005817 ORTHO05D007140 1.1e-85 320.9 254 68.1
MBI06_g16620_MAGBIO Magnolia biondii HOM05D005817 ORTHO05D007140 1.9e-85 320.1 259 66.4
Lj5C284T7 Lonicera japonica HOM05D005817 ORTHO05D007140 4.2e-85 318.9 208 77.9
Sc03g0006230 Simmondsia chinensis HOM05D005817 ORTHO05D007140 5.4e-85 318.5 208 77.4
Nitab4.5_0003247g0070 Nicotiana tabacum HOM05D005817 ORTHO05D007140 2.7e-84 316.2 251 68.1
VMungo1215G1434 Vigna mungo HOM05D005817 ORTHO05D007140 7.8e-84 314.7 207 75.8
Mapoly0107s0026 Marchantia polymorpha HOM05D005817 ORTHO05D007140 1.7e-83 313.5 305 58.0
AL5G11840 Arabidopsis lyrata HOM05D005817 ORTHO05D007140 1.5e-82 310.5 262 63.7
AUR62032450 Chenopodium quinoa HOM05D005817 ORTHO05D007140 6.2e-81 305.1 284 59.9
Os08g0109900 Oryza sativa ssp. japonica HOM05D005817 ORTHO05D007140 8.1e-81 304.7 255 64.7
SHI04993 Sapria himalayana HOM05D005817 ORTHO05D007140 2.4e-80 303.1 317 54.6
Actinidia26194 Actinidia chinensis HOM05D005817 ORTHO05D007140 1.2e-79 300.8 304 59.9
Pp3c10_3580 Physcomitrium patens HOM05D005817 ORTHO05D007140 9.9e-79 297.7 325 52.9
MSTRG.601 Avicennia marina HOM05D005817 ORTHO05D007140 3.2e-77 292.7 209 74.6
A02p33050 Brassica napus HOM05D005817 ORTHO05D007140 7.1e-77 291.6 257 62.6
AagrBONN_evm.TU.Sc2ySwM_117.207 Anthoceros agrestis HOM05D005817 ORTHO05D007140 2.7e-76 289.7 298 54.0
CDE04G1950 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 8.7e-75 284.6 251 63.7
Hma1.2p1_0052F.1_g030010 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 4.3e-74 282.3 184 77.7
Aqoxy385s001 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 9.6e-74 281.2 299 57.2
Duzib235G1547 Durio zibethinus HOM05D005817 ORTHO05D007140 1.8e-72 276.9 244 63.9
CDE02G1227 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 7.6e-71 271.6 295 53.9
HPP92_002041 Vanilla planifolia HOM05D005817 ORTHO05D007140 1.3e-70 270.8 260 60.0
Cpa.g.sc173.14 Carica papaya HOM05D005817 ORTHO05D007140 2.5e-69 266.5 244 61.5
BraA02t08326Z Brassica rapa HOM05D005817 ORTHO05D007140 1.2e-68 264.2 270 57.0
SMO117G0163 Selaginella moellendorffii HOM05D005817 ORTHO05D007140 2.3e-67 260.0 196 67.3
Pp3c10_3582 Physcomitrium patens HOM05D005817 ORTHO05D007140 3.0e-67 259.6 237 58.6
Pp3c14_9240 Physcomitrium patens HOM05D005817 ORTHO05D007140 3.7e-65 252.7 295 50.8
Lalb_Chr12g0195861 Lupinus albus HOM05D005817 ORTHO05D007140 1.7e-62 243.8 165 75.8
CBR_g40810 Chara braunii HOM05D005817 ORTHO05D007140 3.8e-62 242.7 344 45.9
Pp3c1_22040 Physcomitrium patens HOM05D005817 ORTHO05D007140 1.1e-61 241.1 280 51.1
RcHm_v2.0_Chr5g0068831 Rosa chinensis HOM05D005817 ORTHO05D007140 2.8e-57 226.5 155 75.5
Dinv29634 Davidia involucrata HOM05D005817 ORTHO05D007140 2.8e-49 199.9 160 65.6
Zm00001eb174130 Zea mays HOM05D005817 ORTHO05D007140 1.6e-44 184.1 130 73.1
VMungo0766G0001 Vigna mungo HOM05D005817 ORTHO05D007140 2.1e-28 130.6 119 58.0
Cre02.g106550 Chlamydomonas reinhardtii HOM05D005817 ORTHO05D007140 2.3e-27 127.1 344 33.4
MCO12G229 Micromonas commoda HOM05D005817 ORTHO05D007140 1.4e-24 117.9 304 30.6
PRCOL_00002712 Prasinoderma coloniale HOM05D005817 ORTHO05D007140 9.1e-16 88.6 329 28.6
VMungo1148G0001 Vigna mungo HOM05D005817 ORTHO05D007140 5.9e-15 85.9 80 61.2
SEGI_07435 Sequoiadendron giganteum HOM05D005817 ORTHO05D007140 7.2e-13 79.0 110 43.6
FvH4_3g40414 Fragaria vesca HOM05D005817 ORTHO05D007140 4.7e-12 76.3 57 63.2
Thhalv10005196m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 1.7e-09 67.8 52 69.2
Lalb_Chr12g0195851 Lupinus albus HOM05D005817 ORTHO05D007140 7.0e-08 62.4 57 57.9


User provided reference genes

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