Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00092 Erythranthe guttata HOM05D007625 ORTHO05D009738 6.6e-145 517.3 253 100.0
SGA_v2.0_scaffold428G51521 Striga asiatica HOM05D007625 ORTHO05D009738 1.0e-113 413.7 252 79.0
SalBow5G0239 Salvia bowleyana HOM05D007625 ORTHO05D009738 1.1e-99 367.1 221 77.4
TAR633G2367 Trochodendron aralioides HOM05D007625 ORTHO05D009738 1.6e-95 353.2 249 69.9
Lsat_1_v5_gn_5_53001 Lactuca sativa HOM05D007625 ORTHO05D009738 2.1e-95 352.8 243 67.9
DCAR_027078 Daucus carota HOM05D007625 ORTHO05D009738 2.8e-95 352.4 252 65.9
ECA240G3588 Erigeron canadensis HOM05D007625 ORTHO05D009738 2.8e-95 352.4 249 66.3
Medtr4g119840 Medicago truncatula HOM05D007625 ORTHO05D009738 1.1e-94 350.5 257 65.4
Atru.chr4.2832 Acer truncatum HOM05D007625 ORTHO05D009738 1.4e-94 350.1 254 66.1
Thecc.04G284200 Theobroma cacao HOM05D007625 ORTHO05D009738 1.8e-94 349.7 250 67.2
BcaB06g25757 Brassica carinata HOM05D007625 ORTHO05D009738 2.4e-94 349.4 247 68.0
Ciclev10005679m.g Citrus clementina HOM05D007625 ORTHO05D009738 3.1e-94 349.0 256 65.6
MBI18_g04687_MAGBIO Magnolia biondii HOM05D007625 ORTHO05D009738 4.1e-94 348.6 251 64.9
Rhsim02G0009500 Rhododendron simsii HOM05D007625 ORTHO05D009738 9.0e-94 347.4 252 66.7
Actinidia00027 Actinidia chinensis HOM05D007625 ORTHO05D009738 1.2e-93 347.1 257 65.8
PGR031G0588 Punica granatum HOM05D007625 ORTHO05D009738 1.2e-93 347.1 252 65.5
Aqoxy2G02997 Aquilegia oxysepala HOM05D007625 ORTHO05D009738 1.5e-93 346.7 257 66.1
arahy.Tifrunner.gnm1.ann1.96EVWK Arachis hypogaea HOM05D007625 ORTHO05D009738 5.9e-93 344.7 265 63.4
Lj4g0027770 Lotus japonicus HOM05D007625 ORTHO05D009738 7.6e-93 344.4 257 65.0
CANSAT78G1499 Cannabis sativa HOM05D007625 ORTHO05D009738 1.0e-92 344.0 251 64.5
arahy.Tifrunner.gnm1.ann1.QKB3E6 Arachis hypogaea HOM05D007625 ORTHO05D009738 1.7e-92 343.2 262 62.6
Duzib212G0442 Durio zibethinus HOM05D007625 ORTHO05D009738 1.7e-92 343.2 250 66.0
HanXRQChr03g0080751 Helianthus annuus HOM05D007625 ORTHO05D009738 3.8e-92 342.0 248 64.5
Manes.03G194700 Manihot esculenta HOM05D007625 ORTHO05D009738 5.0e-92 341.7 256 66.4
VMungo1215G1867 Vigna mungo HOM05D007625 ORTHO05D009738 5.0e-92 341.7 257 65.0
Cc03_g01990 Coffea canephora HOM05D007625 ORTHO05D009738 6.5e-92 341.3 241 67.6
PSO017G7039 Papaver somniferum HOM05D007625 ORTHO05D009738 8.5e-92 340.9 249 65.5
BraA05t22123Z Brassica rapa HOM05D007625 ORTHO05D009738 1.4e-91 340.1 267 63.3
CSS0007271 Camellia sinensis var. sinensis HOM05D007625 ORTHO05D009738 2.5e-91 339.3 251 65.7
Ca_21505_v3 Cicer arietinum L. HOM05D007625 ORTHO05D009738 4.2e-91 338.6 257 63.0
Hund20557 Selenicereus undatus HOM05D007625 ORTHO05D009738 1.2e-90 337.0 257 64.6
TWI09G0101 Tripterygium wilfordii HOM05D007625 ORTHO05D009738 1.6e-90 336.7 250 64.4
GSVIVG01017755001 Vitis vinifera HOM05D007625 ORTHO05D009738 1.6e-90 336.7 241 67.2
BolC5t33727H Brassica oleracea HOM05D007625 ORTHO05D009738 2.7e-90 335.9 267 62.2
Sp3g14890 Schrenkiella parvula HOM05D007625 ORTHO05D009738 2.7e-90 335.9 250 65.6
Lalb_Chr13g0303611 Lupinus albus HOM05D007625 ORTHO05D009738 3.6e-90 335.5 257 64.2
Thhalv10021369m.g Eutrema salsugineum HOM05D007625 ORTHO05D009738 4.6e-90 335.1 250 65.2
CARHR091770 Cardamine hirsuta HOM05D007625 ORTHO05D009738 1.0e-89 334.0 250 64.8
Phvul.003G105100 Phaseolus vulgaris HOM05D007625 ORTHO05D009738 1.0e-89 334.0 258 63.2
Psat4g025880 Pisum sativum HOM05D007625 ORTHO05D009738 1.8e-89 333.2 251 63.3
TPR.G3171 Trifolium pratense HOM05D007625 ORTHO05D009738 3.9e-89 332.0 254 63.0
Glyma.07G247900 Glycine max HOM05D007625 ORTHO05D009738 6.7e-89 331.3 258 62.0
Prupe.1G137400 Prunus persica HOM05D007625 ORTHO05D009738 6.7e-89 331.3 250 64.4
Sabra10G0014200 Salix brachista HOM05D007625 ORTHO05D009738 1.1e-88 330.5 252 66.3
AL3G29430 Arabidopsis lyrata HOM05D007625 ORTHO05D009738 1.9e-88 329.7 250 62.4
C05p49750 Brassica napus HOM05D007625 ORTHO05D009738 2.5e-88 329.3 258 63.6
Gohir.D09G240200 Gossypium hirsutum HOM05D007625 ORTHO05D009738 4.3e-88 328.6 252 62.3
Gohir.A09G239300 Gossypium hirsutum HOM05D007625 ORTHO05D009738 7.4e-88 327.8 250 62.0
QL06p008815 Quercus lobata HOM05D007625 ORTHO05D009738 9.7e-88 327.4 250 64.8
FAN07G2640 Fragaria x ananassa HOM05D007625 ORTHO05D009738 2.8e-87 325.9 249 62.2
RcHm_v2.0_Chr4g0422131 Rosa chinensis HOM05D007625 ORTHO05D009738 3.7e-87 325.5 250 62.0
FvH4_4g17960 Fragaria vesca HOM05D007625 ORTHO05D009738 2.4e-86 322.8 249 61.4
MD13G1169000 Malus domestica HOM05D007625 ORTHO05D009738 4.1e-86 322.0 249 62.2
ATR0796G164 Amborella trichopoda HOM05D007625 ORTHO05D009738 4.5e-85 318.5 249 61.8
Rhsim02G0010500 Rhododendron simsii HOM05D007625 ORTHO05D009738 4.5e-85 318.5 234 65.8
BcaNung06438 Brassica carinata HOM05D007625 ORTHO05D009738 5.9e-85 318.2 226 66.4
Potri.010G024900 Populus trichocarpa HOM05D007625 ORTHO05D009738 7.7e-85 317.8 242 66.5
Os01g0120400 Oryza sativa ssp. japonica HOM05D007625 ORTHO05D009738 1.1e-83 313.9 249 59.4
CSS0032939 Camellia sinensis var. sinensis HOM05D007625 ORTHO05D009738 2.5e-83 312.8 270 58.9
Gorai.006G263200 Gossypium raimondii HOM05D007625 ORTHO05D009738 1.6e-82 310.1 239 61.1
AT3G16565 Arabidopsis thaliana HOM05D007625 ORTHO05D009738 3.6e-82 308.9 283 55.8
Dinv44384 Davidia involucrata HOM05D007625 ORTHO05D005073 2.3e-81 306.2 253 60.1
FAN12G1696 Fragaria x ananassa HOM05D007625 ORTHO05D009738 3.3e-80 302.4 245 58.8
FAN12G4294 Fragaria x ananassa HOM05D007625 ORTHO05D009738 5.7e-80 301.6 241 59.8
FAN17G2144 Fragaria x ananassa HOM05D007625 ORTHO05D009738 4.8e-79 298.5 275 54.5
Eucgr.B01310 Eucalyptus grandis HOM05D007625 ORTHO05D009738 3.1e-78 295.8 237 62.0
Hma1.2p1_1567F.1_g291060 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 3.4e-77 292.4 212 66.5
vmacro15237 Vaccinium macrocarpon HOM05D007625 ORTHO05D009738 6.5e-76 288.1 247 58.7
Pp3c1_7890 Physcomitrium patens HOM05D007625 ORTHO05D009738 2.5e-75 286.2 250 54.8
Hma1.2p1_0078F.1_g040640 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 6.1e-74 281.6 210 65.7
Nn3g21433 Nelumbo nucifera HOM05D007625 ORTHO05D009738 5.3e-70 268.5 249 55.4
SMO356G0461 Selaginella moellendorffii HOM05D007625 ORTHO05D009738 1.2e-69 267.3 250 52.8
Lj3A816T27 Lonicera japonica HOM05D007625 ORTHO05D009738 4.2e-67 258.8 219 61.6
SMO002G0002 Selaginella moellendorffii HOM05D007625 ORTHO05D009738 1.6e-66 256.9 241 53.1
CDE12G0709 Ceratophyllum demersum HOM05D007625 ORTHO05D009738 4.4e-64 248.8 250 52.8
Cpa.g.sc16.167 Carica papaya HOM05D007625 ORTHO05D009738 2.4e-62 243.0 201 60.2
AagrBONN_evm.TU.Sc2ySwM_228.2358 Anthoceros agrestis HOM05D007625 ORTHO05D009738 7.0e-62 241.5 183 61.7
AUR62035873 Chenopodium quinoa HOM05D007625 ORTHO05D009738 5.9e-61 238.4 194 60.8
Lj3A819G38 Lonicera japonica HOM05D007625 ORTHO05D009738 8.5e-60 234.6 276 50.0
Aa31LG8G3700 Aethionema arabicum HOM05D007625 ORTHO05D009738 5.5e-59 231.9 266 49.6
Carub.0003s1629 Capsella rubella HOM05D007625 ORTHO05D009738 7.2e-59 231.5 160 65.6
Glyma.17G026200 Glycine max HOM05D007625 ORTHO05D009738 2.0e-56 223.4 356 39.9
Zm00001eb334800 Zea mays HOM05D007625 ORTHO05D009738 9.5e-51 204.5 176 58.5
Sc19g0005180 Simmondsia chinensis HOM05D007625 ORTHO05D009738 4.0e-49 199.1 257 45.1
EL10Ac3g06592 Beta vulgaris HOM05D007625 ORTHO05D009738 6.3e-47 191.8 251 44.6
MCO16G322 Micromonas commoda HOM05D007625 ORTHO05D009738 6.3e-47 191.8 256 40.2
unitig_0.g621 Utricularia gibba HOM05D007625 ORTHO05D009738 6.0e-29 132.1 144 51.4
BcaB03g15776 Brassica carinata HOM05D007625 ORTHO05D009738 1.3e-28 131.0 108 64.8
Hma1.2p1_0785F.1_g217410 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 1.9e-22 110.5 71 69.0
Medtr4g123440 Medicago truncatula HOM05D007625 ORTHO05D009738 1.4e-17 94.4 117 48.7
Cpa.g.c47082 Carica papaya HOM05D007625 ORTHO05D009738 1.9e-14 84.0 82 56.1
Aqoxy2G02999 Aquilegia oxysepala HOM05D007625 ORTHO05D009738 3.2e-14 83.2 71 54.9
Glyma.19G060100 Glycine max HOM05D007625 ORTHO05D009738 7.1e-14 82.0 96 47.9
MD16G1169600 Malus domestica HOM05D007625 ORTHO05D009738 1.4e-09 67.8 66 47.0
Os10g0182000 Oryza sativa ssp. japonica HOM05D001816 ORTHO05D002001 5.8e-08 62.4 252 25.8
AUR62028574 Chenopodium quinoa HOM05D001816 ORTHO05D002001 1.7e-07 60.8 228 26.3
AUR62017503 Chenopodium quinoa HOM05D001816 ORTHO05D002001 3.8e-07 59.7 270 25.9
AUR62033529 Chenopodium quinoa HOM05D001816 ORTHO05D002001 6.4e-07 58.9 270 25.9
Peaxi162Scf00133g00523 Petunia axillaris HOM05D001816 ORTHO05D002001 6.4e-07 58.9 235 27.7
Actinidia24519 Actinidia chinensis HOM05D001816 ORTHO05D002001 8.4e-07 58.5 228 26.8
Solyc03g097290.4 Solanum lycopersicum HOM05D001816 ORTHO05D002001 8.4e-07 58.5 235 25.1
Sopen03g028060 Solanum pennellii HOM05D001816 ORTHO05D002001 8.4e-07 58.5 235 25.1
AUR62015043 Chenopodium quinoa HOM05D001816 ORTHO05D002001 2.4e-06 57.0 273 25.3
CsaV3_3G031480 Cucumis sativus L. HOM05D001816 ORTHO05D002001 2.4e-06 57.0 228 23.7
MBI15_g27187_MAGBIO Magnolia biondii HOM05D001816 ORTHO05D002001 3.2e-06 56.6 230 25.2
Nitab4.5_0000021g0810 Nicotiana tabacum HOM05D001816 ORTHO05D002001 3.2e-06 56.6 228 25.9
RcHm_v2.0_Chr4g0446511 Rosa chinensis HOM05D001816 ORTHO05D002001 3.2e-06 56.6 228 25.4
CDE05G2317 Ceratophyllum demersum HOM05D001816 ORTHO05D002001 4.2e-06 56.2 235 25.1
Sed0023453 Sechium edule HOM05D001816 ORTHO05D002001 4.2e-06 56.2 236 24.6
unitig_52.g17019 Utricularia gibba HOM05D001816 ORTHO05D002001 4.2e-06 56.2 230 25.7
Zm00001eb409500 Zea mays HOM05D001816 ORTHO05D002001 4.2e-06 56.2 230 25.7
EL10Ac7g16954 Beta vulgaris HOM05D001816 ORTHO05D002001 5.4e-06 55.8 293 25.9
Actinidia08767 Actinidia chinensis HOM05D001816 ORTHO05D002001 7.1e-06 55.5 228 25.9
Ah.08g210750 Amaranthus hybridus HOM05D001816 ORTHO05D002001 7.1e-06 55.5 228 24.6
arahy.Tifrunner.gnm1.ann1.56UDE7 Arachis hypogaea HOM05D001816 ORTHO05D002001 7.1e-06 55.5 228 24.1
arahy.Tifrunner.gnm1.ann1.8P6R80 Arachis hypogaea HOM05D001816 ORTHO05D002001 7.1e-06 55.5 228 24.1
C03p89530 Brassica napus HOM05D001816 ORTHO05D002001 7.1e-06 55.5 213 25.8
Lj3g0010854 Lotus japonicus HOM05D001816 ORTHO05D002001 9.3e-06 55.1 228 24.1
Lj3g0027168 Lotus japonicus HOM05D001816 ORTHO05D002001 9.3e-06 55.1 228 24.1
Sed0023914 Sechium edule HOM05D001816 ORTHO05D002001 9.3e-06 55.1 236 25.0


User provided reference genes

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