Gene: Sopen03g028060

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g028060
  • Transcript Identifier Sopen03g028060.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 63637146-63680661 : positive

Gene Family Information

  • ID HOM05D001816
  • #Genes/#Species 361/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g028060.1

Descriptions

  • Description Alanyl-tRNA synthetase (ALATS) | FUNCTIONS IN: alanine-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, ATP binding, nucleic acid binding | INVOLVED IN: alanyl-tRNA aminoacylation | LOCATED IN: mitochondrion, chloroplast | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Alanyl-tRNA synthetase, class IIc , Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain , Alanyl-tRNA synthetase, class IIc, anti-codon-binding domain , Alanyl-tRNA synthetase, class IIc, core domain , Threonyl/alanyl tRNA synthetase, SAD , Alanyl-tRNA synthetase, class IIc, N-terminal , Phosphoesterase, DHHA1 | BEST Arabidopsis thaliana protein match is: Alanyl-tRNA synthetase, class IIc ., Alanyl-tRNA synthetase, class IIc, N-terminal
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006419
IEA
InterProalanyl-tRNA aminoacylation
GO:0043039
IEA
InterProtRNA aminoacylation
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G50200

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0005515
IEA
InterProprotein binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0000166
IEA
InterPronucleotide binding
GO:0004813
IEA
InterProalanine-tRNA ligase activity
GO:0005524
IEA
InterProATP binding
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G50200
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G50200
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G50200

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003890 MIF4G-like, type 3
IPR003156 DHHA1 domain
IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily
IPR016021 MIF4G-like domain superfamily
IPR016024 Armadillo-type fold
IPR002318 Alanine-tRNA ligase, class IIc
IPR012947 Threonyl/alanyl tRNA synthetase, SAD
IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal
IPR003891 Initiation factor eIF-4 gamma, MA3
IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily
IPR009000 Translation protein, beta-barrel domain superfamily
Mapman id Description
17.2.1 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase