Gene: Os10g0182000

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os10g0182000
  • Transcript Identifier Os10t0182000-01
  • Gene Type Coding gene
  • Location chr10 : 5632473-5642842 : positive

Gene Family Information

  • ID HOM05D001816
  • #Genes/#Species 361/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os10t0182000-01
  • MSU-ID LOC_Os10g10244.1
  • uniprot Q10A14

Descriptions

  • Description Similar to Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7) (Alanine--tRNA ligase) (AlaRS).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006400
IBA
GOA DatabasetRNA modification
GO:0006419
IBA
IEA
GOA Databasealanyl-tRNA aminoacylation
GO:0006419
IEA
InterProalanyl-tRNA aminoacylation
GO:0043039
IEA
GOA DatabasetRNA aminoacylation
GO:0043039
IEA
InterProtRNA aminoacylation
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G22800
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G50200
GO:0070143
IEA
GOA Databasemitochondrial alanyl-tRNA aminoacylation
GO:0006412
IEA
GOA Databasetranslation
GO:0106074
IEA
GOA Databaseaminoacyl-tRNA metabolism involved in translational fidelity

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IBA
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004813
IBA
IEA
GOA Databasealanine-tRNA ligase activity
GO:0004813
IEA
InterProalanine-tRNA ligase activity
GO:0016597
IBA
GOA Databaseamino acid binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0002161
IBA
GOA Databaseaminoacyl-tRNA editing activity
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0016874
IEA
GOA Databaseligase activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0000049
IEA
GOA DatabasetRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IBA
GOA Databasechloroplast
GO:0005829
IBA
GOA Databasecytosol
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G22800
GO:0005739
IBA
IEA
GOA Databasemitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily
IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal
IPR002318 Alanine-tRNA ligase, class IIc
IPR012947 Threonyl/alanyl tRNA synthetase, SAD
IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily
IPR009000 Translation protein, beta-barrel domain superfamily
IPR003156 DHHA1 domain
Mapman id Description
17.2.1 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase