Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00128 Erythranthe guttata HOM05D006964 ORTHO05D008861 1.9e-125 452.6 239 100.0
SGA_v2.0_scaffold73G24408 Striga asiatica HOM05D006964 ORTHO05D008861 1.3e-57 227.3 260 59.2
Peaxi162Scf00314g00515 Petunia axillaris HOM05D006964 ORTHO05D008861 5.4e-56 221.9 252 50.4
Nitab4.5_0004302g0010 Nicotiana tabacum HOM05D006964 ORTHO05D008861 1.1e-53 214.2 265 50.9
Nn7g38387 Nelumbo nucifera HOM05D006964 ORTHO05D008861 3.3e-53 212.6 257 51.4
Solyc03g118320.1 Solanum lycopersicum HOM05D006964 ORTHO05D008861 4.3e-53 212.2 276 49.3
CAN.G843.21 Capsicum annuum HOM05D006964 ORTHO05D008861 5.6e-53 211.8 273 49.8
Manes.16G000700 Manihot esculenta HOM05D006964 ORTHO05D008861 5.6e-53 211.8 264 48.9
Nitab4.5_0000660g0010 Nicotiana tabacum HOM05D006964 ORTHO05D008861 5.6e-53 211.8 267 50.9
Sopen03g037220 Solanum pennellii HOM05D006964 ORTHO05D008861 2.8e-52 209.5 276 49.3
Nitab4.5_0000663g0200 Nicotiana tabacum HOM05D006964 ORTHO05D008861 8.1e-52 208.0 292 48.6
Cfa016256 Carpinus fangiana HOM05D006964 ORTHO05D008861 1.4e-51 207.2 248 50.8
Sed0000140 Sechium edule HOM05D006964 ORTHO05D008861 6.8e-51 204.9 262 52.7
Oeu061991.1 Olea europaea HOM05D006964 ORTHO05D008861 1.2e-50 204.1 244 52.9
arahy.Tifrunner.gnm1.ann1.3RSR9Y Arachis hypogaea HOM05D006964 ORTHO05D008861 2.0e-50 203.4 264 50.0
arahy.Tifrunner.gnm1.ann1.EIVX2Z Arachis hypogaea HOM05D006964 ORTHO05D008861 2.6e-50 203.0 262 50.0
ClCG07G011010 Citrullus lanatus HOM05D006964 ORTHO05D008861 2.6e-50 203.0 263 48.3
Medtr5g098850 Medicago truncatula HOM05D006964 ORTHO05D008861 5.8e-50 201.8 249 50.2
Aqoxy7G03560 Aquilegia oxysepala HOM05D006964 ORTHO05D008861 7.6e-50 201.4 257 52.9
PGR031G2089 Punica granatum HOM05D006964 ORTHO05D008861 9.9e-50 201.1 264 50.8
unitig_699.g19570 Utricularia gibba HOM05D006964 ORTHO05D008861 9.9e-50 201.1 250 49.6
Haze_00006 Corylus avellana HOM05D006964 ORTHO05D008861 1.7e-49 200.3 250 49.2
PGSC0003DMG400014180 Solanum tuberosum HOM05D006964 ORTHO05D008861 3.8e-49 199.1 280 47.1
COL.COLO4_20003 Corchorus olitorius HOM05D006964 ORTHO05D008861 4.9e-49 198.7 260 49.2
Glyma.14G003100 Glycine max HOM05D006964 ORTHO05D008861 4.9e-49 198.7 244 50.4
Gohir.D08G060500 Gossypium hirsutum HOM05D006964 ORTHO05D008861 6.4e-49 198.4 261 52.1
Gorai.004G062600 Gossypium raimondii HOM05D006964 ORTHO05D008861 6.4e-49 198.4 261 52.1
CiPaw.05G264600 Carya illinoinensis HOM05D006964 ORTHO05D008861 8.4e-49 198.0 266 47.7
TAR464G0001 Trochodendron aralioides HOM05D006964 ORTHO05D008861 8.4e-49 198.0 257 51.0
Rhsim02G0171800 Rhododendron simsii HOM05D006964 ORTHO05D008861 1.1e-48 197.6 278 48.2
Cc11_g00270 Coffea canephora HOM05D006964 ORTHO05D008861 7.1e-48 194.9 304 44.4
Thecc.01G176000 Theobroma cacao HOM05D006964 ORTHO05D008861 9.2e-48 194.5 261 52.1
Atru.chr8.1035 Acer truncatum HOM05D006964 ORTHO05D008861 2.1e-47 193.4 252 46.8
Hma1.2p1_0391F.1_g142860 Hydrangea macrophylla HOM05D006964 ORTHO05D008861 2.1e-47 193.4 288 46.9
CARHR026810 Cardamine hirsuta HOM05D006964 ORTHO05D008861 2.7e-47 193.0 243 49.0
Potri.011G023800 Populus trichocarpa HOM05D006964 ORTHO05D008861 3.5e-47 192.6 263 47.5
RcHm_v2.0_Chr7g0233321 Rosa chinensis HOM05D006964 ORTHO05D008861 6.0e-47 191.8 250 48.8
Gohir.A08G050700 Gossypium hirsutum HOM05D006964 ORTHO05D008861 7.8e-47 191.4 267 50.6
AT1G24290 Arabidopsis thaliana HOM05D006964 ORTHO05D008861 1.3e-46 190.7 248 48.8
Ciclev10011398m.g Citrus clementina HOM05D006964 ORTHO05D008861 2.3e-46 189.9 256 49.6
vmacro11021 Vaccinium macrocarpon HOM05D006964 ORTHO05D008861 3.0e-46 189.5 286 45.5
BraA07t28989Z Brassica rapa HOM05D006964 ORTHO05D008861 3.9e-46 189.1 243 49.4
A07p12030 Brassica napus HOM05D006964 ORTHO05D008861 5.1e-46 188.7 243 49.0
Sp1g23470 Schrenkiella parvula HOM05D006964 ORTHO05D008861 5.1e-46 188.7 244 49.6
Eucgr.A00951 Eucalyptus grandis HOM05D006964 ORTHO05D008861 6.6e-46 188.3 287 47.4
EL10Ac6g15329 Beta vulgaris HOM05D006964 ORTHO05D008861 8.7e-46 188.0 248 46.8
Sabra11G0014800 Salix brachista HOM05D006964 ORTHO05D008861 8.7e-46 188.0 263 46.8
QL04p064712 Quercus lobata HOM05D006964 ORTHO05D008861 1.1e-45 187.6 268 50.0
QL04p064780 Quercus lobata HOM05D006964 ORTHO05D008861 1.1e-45 187.6 268 50.0
SHI28197 Sapria himalayana HOM05D006964 ORTHO05D008861 1.1e-45 187.6 268 44.8
DCAR_005902 Daucus carota HOM05D006964 ORTHO05D008861 1.9e-45 186.8 252 48.4
FvH4_5g33930 Fragaria vesca HOM05D006964 ORTHO05D008861 1.9e-45 186.8 253 51.0
AUR62017863 Chenopodium quinoa HOM05D006964 ORTHO05D008861 2.5e-45 186.4 252 46.4
Ca_06492_v3 Cicer arietinum L. HOM05D006964 ORTHO05D008861 2.5e-45 186.4 263 49.0
C07p17970 Brassica napus HOM05D006964 ORTHO05D008861 3.3e-45 186.0 243 48.6
Carub.0001s2577 Capsella rubella HOM05D006964 ORTHO05D008861 3.3e-45 186.0 247 49.0
MD03G1299000 Malus domestica HOM05D006964 ORTHO05D008861 3.3e-45 186.0 268 47.0
AL1G40630 Arabidopsis lyrata HOM05D006964 ORTHO05D008861 4.3e-45 185.7 243 48.6
FAN08G0714 Fragaria x ananassa HOM05D006964 ORTHO05D008861 4.3e-45 185.7 246 48.0
BcaC06g35275 Brassica carinata HOM05D006964 ORTHO05D008861 5.6e-45 185.3 243 48.1
BolC7t42303H Brassica oleracea HOM05D006964 ORTHO05D008861 5.6e-45 185.3 243 48.1
Lj1A623T74 Lonicera japonica HOM05D006964 ORTHO05D008861 1.6e-44 183.7 259 48.6
FAN18G1087 Fragaria x ananassa HOM05D006964 ORTHO05D008861 2.8e-44 183.0 246 47.6
Thhalv10009719m.g Eutrema salsugineum HOM05D006964 ORTHO05D008861 3.6e-44 182.6 243 49.0
BcaB03g13997 Brassica carinata HOM05D006964 ORTHO05D008861 1.1e-43 181.0 243 47.3
Sc07g0001890 Simmondsia chinensis HOM05D006964 ORTHO05D008861 1.4e-43 180.6 270 47.8
Cpa.g.sc332.3 Carica papaya HOM05D006964 ORTHO05D008861 3.1e-43 179.5 252 48.0
TPR.G35899 Trifolium pratense HOM05D006964 ORTHO05D008861 3.1e-43 179.5 248 46.0
Ah.02g121270 Amaranthus hybridus HOM05D006964 ORTHO05D008861 5.2e-43 178.7 255 43.5
ATR0763G192 Amborella trichopoda HOM05D006964 ORTHO05D008861 1.2e-42 177.6 265 45.3
SalBow7G3142 Salvia bowleyana HOM05D006964 ORTHO05D008861 2.6e-42 176.4 262 45.0
MBI18_g18636_MAGBIO Magnolia biondii HOM05D006964 ORTHO05D008861 7.6e-42 174.9 244 46.3
ECA234G0414 Erigeron canadensis HOM05D006964 ORTHO05D008861 2.2e-41 173.3 248 46.0
AUR62003549 Chenopodium quinoa HOM05D006964 ORTHO05D008861 2.9e-41 172.9 251 43.8
LjContig00081g0000792 Lotus japonicus HOM05D006964 ORTHO05D008861 2.9e-41 172.9 259 49.8
Aa31LG7G9960 Aethionema arabicum HOM05D006964 ORTHO05D008861 3.8e-41 172.6 244 46.3
Lsat_1_v5_gn_1_40040 Lactuca sativa HOM05D006964 ORTHO05D008861 6.4e-41 171.8 250 46.4
Phvul.008G290000 Phaseolus vulgaris HOM05D006964 ORTHO05D008861 6.4e-41 171.8 263 44.5
Lalb_Chr10g0101591 Lupinus albus HOM05D006964 ORTHO05D008861 8.4e-41 171.4 246 45.9
HanXRQChr11g0342451 Helianthus annuus HOM05D006964 ORTHO05D008861 1.4e-40 170.6 255 49.4
CDE02G0076 Ceratophyllum demersum HOM05D006964 ORTHO05D008861 5.4e-40 168.7 228 48.2
Dinv35124 Davidia involucrata HOM05D006964 ORTHO05D008861 3.5e-39 166.0 261 45.2
THA.LOC104827506 Tarenaya hassleriana HOM05D006964 ORTHO05D008861 3.9e-38 162.5 243 44.4
Psat2g001680 Pisum sativum HOM05D006964 ORTHO05D008861 4.8e-36 155.6 131 65.6
CsaV3_4G007230 Cucumis sativus L. HOM05D006964 ORTHO05D008861 2.4e-35 153.3 126 65.9
GSVIVG01015905001 Vitis vinifera HOM05D006964 ORTHO05D008861 5.8e-34 148.7 128 64.1
HPP92_016337 Vanilla planifolia HOM05D006964 ORTHO05D008861 2.9e-33 146.4 254 40.6
SEGI_30607 Sequoiadendron giganteum HOM05D006964 ORTHO05D008861 1.4e-32 144.1 333 31.5
HPP92_016414 Vanilla planifolia HOM05D006964 ORTHO05D008861 2.4e-32 143.3 254 39.8
Nitab4.5_0002450g0010 Nicotiana tabacum HOM05D006964 ORTHO05D008861 4.2e-32 142.5 282 41.5
Lj1C622G7 Lonicera japonica HOM05D006964 ORTHO05D008861 4.6e-31 139.0 131 59.5
Mapoly0100s0005 Marchantia polymorpha HOM05D006964 ORTHO05D008861 2.8e-28 129.8 186 42.5
Haze_26752 Corylus avellana HOM05D006964 ORTHO05D008861 3.2e-24 116.3 142 44.4
Pp3c24_11680 Physcomitrium patens HOM05D006964 ORTHO05D008861 7.1e-24 115.2 160 42.5
SMO116G0181 Selaginella moellendorffii HOM05D006964 ORTHO05D008861 7.1e-24 115.2 121 50.4
Medtr6g036640 Medicago truncatula HOM05D006964 ORTHO05D008861 4.6e-23 112.5 109 58.7
Pp3c23_21270 Physcomitrium patens HOM05D006964 ORTHO05D008861 6.0e-23 112.1 126 47.6
Ca_28576_v3 Cicer arietinum L. HOM05D006964 ORTHO05D008861 3.9e-22 109.4 123 49.6
Cfa024934 Carpinus fangiana HOM05D006964 ORTHO05D008861 4.5e-18 95.9 128 43.8
Actinidia35156 Actinidia chinensis HOM05D006964 ORTHO05D008861 5.1e-14 82.4 160 37.5
CsaV3_4G007240 Cucumis sativus L. HOM05D006964 ORTHO05D008861 6.1e-07 58.9 68 47.1


User provided reference genes

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