Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01408 Erythranthe guttata HOM05D004873 ORTHO05D006122 0.0e+00 1406.7 938 100.0
SGA_v2.0_scaffold165G38251 Striga asiatica HOM05D004873 ORTHO05D006122 5.1e-235 818.5 976 59.6
Oeu055452.2 Olea europaea HOM05D004873 ORTHO05D006122 2.0e-223 780.0 967 58.3
MSTRG.7893 Avicennia marina HOM05D004873 ORTHO05D006122 4.1e-216 755.7 753 69.2
PGSC0003DMG400030977 Solanum tuberosum HOM05D004873 ORTHO05D006122 2.1e-188 663.7 961 58.8
Sopen05g001620 Solanum pennellii HOM05D004873 ORTHO05D006122 2.3e-187 660.2 960 56.8
CAN.G376.10 Capsicum annuum HOM05D004873 ORTHO05D006122 1.1e-184 651.4 827 59.7
Dinv24864 Davidia involucrata HOM05D004873 ORTHO05D006122 6.4e-177 625.5 801 59.4
unitig_27.g25195 Utricularia gibba HOM05D004873 ORTHO05D006122 4.6e-175 619.4 901 53.9
Peaxi162Scf00338g00218 Petunia axillaris HOM05D004873 ORTHO05D006122 2.3e-174 617.1 938 53.7
CSS0025142 Camellia sinensis var. sinensis HOM05D004873 ORTHO05D006122 3.3e-173 613.2 901 57.2
Cc11_g14610 Coffea canephora HOM05D004873 ORTHO05D006122 5.6e-173 612.5 917 53.4
DCAR_024143 Daucus carota HOM05D004873 ORTHO05D006122 1.8e-171 607.4 905 53.9
Nn4g22808 Nelumbo nucifera HOM05D004873 ORTHO05D006122 2.4e-168 597.0 919 56.0
Atru.chr11.2013 Acer truncatum HOM05D004873 ORTHO05D006122 1.2e-167 594.7 911 52.4
Duzib251G0436 Durio zibethinus HOM05D004873 ORTHO05D006122 3.3e-165 586.6 906 52.1
vmacro01183 Vaccinium macrocarpon HOM05D004873 ORTHO05D006122 3.6e-164 583.2 919 56.4
GSVIVG01020233001 Vitis vinifera HOM05D004873 ORTHO05D006122 4.1e-160 569.7 835 54.3
Actinidia01706 Actinidia chinensis HOM05D004873 ORTHO05D006122 7.1e-160 568.9 901 54.7
CiPaw.05G150500 Carya illinoinensis HOM05D004873 ORTHO05D006122 2.1e-159 567.4 896 53.5
Hma1.2p1_0160F.1_g070740 Hydrangea macrophylla HOM05D004873 ORTHO05D006122 3.5e-159 566.6 934 49.0
RcHm_v2.0_Chr4g0443951 Rosa chinensis HOM05D004873 ORTHO05D006122 6.6e-158 562.4 894 52.3
Lj6A805G39 Lonicera japonica HOM05D004873 ORTHO05D006122 1.1e-157 561.6 981 51.0
Duzib248G0479 Durio zibethinus HOM05D004873 ORTHO05D006122 1.5e-157 561.2 894 50.0
Lsat_1_v5_gn_4_6981 Lactuca sativa HOM05D004873 ORTHO05D006122 8.1e-156 555.4 917 51.0
TAR622G0484 Trochodendron aralioides HOM05D004873 ORTHO05D006122 8.1e-156 555.4 920 54.3
Ciclev10030647m.g Citrus clementina HOM05D004873 ORTHO05D006122 1.1e-155 555.1 908 51.5
DCAR_026543 Daucus carota HOM05D004873 ORTHO05D006122 2.6e-154 550.4 928 48.1
MBI15_g36943_MAGBIO Magnolia biondii HOM05D004873 ORTHO05D006122 2.6e-154 550.4 917 54.2
Eucgr.B03347 Eucalyptus grandis HOM05D004873 ORTHO05D006122 4.4e-154 549.7 900 51.8
FAN22G1569 Fragaria x ananassa HOM05D004873 ORTHO05D006122 3.8e-153 546.6 913 50.6
TWI18G0605 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 4.9e-153 546.2 898 50.3
Dinv15307 Davidia involucrata HOM05D004873 ORTHO05D006122 1.1e-152 545.0 780 58.6
TWI36G0907 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 1.2e-151 541.6 896 52.9
TAR374G0217 Trochodendron aralioides HOM05D004873 ORTHO05D006122 2.1e-151 540.8 859 56.8
FvH4_4g34571 Fragaria vesca HOM05D004873 ORTHO05D006122 3.5e-151 540.0 910 51.0
FAN12G3868 Fragaria x ananassa HOM05D004873 ORTHO05D006122 7.8e-151 538.9 909 50.8
Manes.13G031000 Manihot esculenta HOM05D004873 ORTHO05D006122 1.6e-148 531.2 785 57.3
COL.COLO4_36971 Corchorus olitorius HOM05D004873 ORTHO05D006122 3.6e-148 530.0 861 47.4
Haze_12170 Corylus avellana HOM05D004873 ORTHO05D006122 9.0e-147 525.4 941 48.7
Hma1.2p1_0867F.1_g230230 Hydrangea macrophylla HOM05D004873 ORTHO05D006122 2.0e-146 524.2 825 51.2
TWI75G0297 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 5.8e-146 522.7 907 51.6
ECA199G0004 Erigeron canadensis HOM05D004873 ORTHO05D006122 7.6e-146 522.3 897 49.7
QL03p061438 Quercus lobata HOM05D004873 ORTHO05D006122 7.6e-146 522.3 794 55.3
Gorai.005G183000 Gossypium raimondii HOM05D004873 ORTHO05D006122 1.3e-145 521.5 789 55.0
Gohir.D02G163000 Gossypium hirsutum HOM05D004873 ORTHO05D006122 1.7e-145 521.2 788 55.1
Aqoxy3G02990_Aqoxy3G02991 Aquilegia oxysepala HOM05D004873 ORTHO05D006122 2.2e-145 520.8 915 51.6
Nitab4.5_0000113g0270 Nicotiana tabacum HOM05D004873 ORTHO05D006122 2.2e-145 520.8 896 45.1
CANSAT01G1467 Cannabis sativa HOM05D004873 ORTHO05D006122 1.9e-144 517.7 917 49.1
FAN17G2310 Fragaria x ananassa HOM05D004873 ORTHO05D006122 4.2e-144 516.5 909 50.3
Cfa009139 Carpinus fangiana HOM05D004873 ORTHO05D006122 7.9e-143 512.3 940 49.7
MELO3C012001.2 Cucumis melo HOM05D004873 ORTHO05D006122 3.0e-142 510.4 927 48.8
HanXRQChr12g0383471 Helianthus annuus HOM05D004873 ORTHO05D006122 1.1e-141 508.4 868 51.5
Ca_04600_v3 Cicer arietinum L. HOM05D004873 ORTHO05D006122 4.3e-141 506.5 898 50.6
MD13G1091200 Malus domestica HOM05D004873 ORTHO05D006122 2.8e-140 503.8 780 57.8
AUR62005371 Chenopodium quinoa HOM05D004873 ORTHO05D006122 5.3e-139 499.6 788 47.5
Rhsim12G0047400 Rhododendron simsii HOM05D004873 ORTHO05D006122 2.0e-138 497.7 954 49.1
TPR.G13590 Trifolium pratense HOM05D004873 ORTHO05D006122 7.6e-138 495.7 904 49.6
Sc11g0001220 Simmondsia chinensis HOM05D004873 ORTHO05D006122 2.2e-137 494.2 761 53.2
arahy.Tifrunner.gnm1.ann1.SJZ9IC Arachis hypogaea HOM05D004873 ORTHO05D006122 8.4e-137 492.3 973 48.5
ClCG05G025280 Citrullus lanatus HOM05D004873 ORTHO05D006122 1.9e-136 491.1 790 52.2
Medtr5g034430 Medicago truncatula HOM05D004873 ORTHO05D006122 1.9e-136 491.1 920 49.6
ATR0691G293 Amborella trichopoda HOM05D004873 ORTHO05D006122 2.4e-136 490.7 906 54.4
Sabra10G0067000 Salix brachista HOM05D004873 ORTHO05D006122 2.4e-136 490.7 803 54.7
Potri.008G147100 Populus trichocarpa HOM05D004873 ORTHO05D006122 5.5e-136 489.6 800 49.4
FAN07G2437 Fragaria x ananassa HOM05D004873 ORTHO05D006122 1.2e-135 488.4 783 52.2
Potri.010G094700 Populus trichocarpa HOM05D004873 ORTHO05D006122 2.1e-135 487.6 874 55.5
Prupe.1G254700 Prunus persica HOM05D004873 ORTHO05D006122 3.5e-135 486.9 781 57.5
Sed0006362 Sechium edule HOM05D004873 ORTHO05D006122 7.9e-135 485.7 790 50.8
arahy.Tifrunner.gnm1.ann1.QGK7DH Arachis hypogaea HOM05D004873 ORTHO05D006122 2.3e-134 484.2 996 47.5
MD16G1091700 Malus domestica HOM05D004873 ORTHO05D006122 1.9e-133 481.1 775 55.5
HPP92_019184 Vanilla planifolia HOM05D004873 ORTHO05D006122 2.5e-133 480.7 909 46.2
Glyma.01G031400 Glycine max HOM05D004873 ORTHO05D006122 4.3e-133 479.9 920 48.9
Gohir.A03G140300 Gossypium hirsutum HOM05D004873 ORTHO05D006122 4.3e-133 479.9 775 53.8
CsaV3_5G031610 Cucumis sativus L. HOM05D004873 ORTHO05D006122 3.7e-132 476.9 777 52.6
VMungo1215G2983 Vigna mungo HOM05D004873 ORTHO05D006122 1.4e-131 474.9 901 51.3
Lalb_Chr16g0392411 Lupinus albus HOM05D004873 ORTHO05D006122 1.8e-131 474.6 787 52.6
PSO063G1237 Papaver somniferum HOM05D004873 ORTHO05D006122 2.0e-130 471.1 835 55.2
PGR102G2017 Punica granatum HOM05D004873 ORTHO05D006122 1.3e-129 468.4 882 51.1
Psat2g106600 Pisum sativum HOM05D004873 ORTHO05D006122 6.5e-129 466.1 792 51.4
Phvul.002G071900 Phaseolus vulgaris HOM05D004873 ORTHO05D006122 1.1e-128 465.3 791 52.2
BcaC06g31808 Brassica carinata HOM05D004873 ORTHO05D006122 7.9e-127 459.1 873 49.0
Oeu056734.1 Olea europaea HOM05D004873 ORTHO05D006122 7.9e-127 459.1 831 49.2
BraA01t02979Z Brassica rapa HOM05D004873 ORTHO05D006122 5.7e-125 453.0 905 48.4
BolC1t03651H Brassica oleracea HOM05D004873 ORTHO05D006122 1.6e-124 451.4 902 46.9
Carub.0002s0504 Capsella rubella HOM05D004873 ORTHO05D006122 3.7e-124 450.3 858 47.1
AL2G16455 Arabidopsis lyrata HOM05D004873 ORTHO05D006122 4.8e-124 449.9 919 46.6
A01p29150 Brassica napus HOM05D004873 ORTHO05D006122 8.2e-124 449.1 905 48.1
CARHR052750 Cardamine hirsuta HOM05D004873 ORTHO05D006122 8.2e-124 449.1 800 50.1
C01p36930 Brassica napus HOM05D004873 ORTHO05D006122 2.6e-122 444.1 900 45.3
Glyma.02G034300 Glycine max HOM05D004873 ORTHO05D006122 1.0e-121 442.2 780 51.4
Cpa.g.sc69.19 Carica papaya HOM05D004873 ORTHO05D006122 2.2e-121 441.0 888 43.7
C04p26690 Brassica napus HOM05D004873 ORTHO05D006122 1.2e-119 435.3 919 45.3
BolC4t24137H Brassica oleracea HOM05D004873 ORTHO05D006122 1.2e-119 435.3 919 45.3
PSO832G2005 Papaver somniferum HOM05D004873 ORTHO05D006122 1.2e-119 435.3 937 48.1
AUR62014033 Chenopodium quinoa HOM05D004873 ORTHO05D006122 2.1e-119 434.5 787 45.4
BcaB04g20256 Brassica carinata HOM05D004873 ORTHO05D006122 3.6e-119 433.7 855 49.5
Aa31LG2G10110 Aethionema arabicum HOM05D004873 ORTHO05D006122 4.6e-119 433.3 836 47.8
EL10Ac6g13668 Beta vulgaris HOM05D004873 ORTHO05D006122 7.9e-119 432.6 955 46.8
BcaC09g49418 Brassica carinata HOM05D004873 ORTHO05D006122 7.9e-119 432.6 899 45.9
Lalb_Chr05g0228131 Lupinus albus HOM05D004873 ORTHO05D006122 1.5e-117 428.3 785 50.1
Sp2g04470 Schrenkiella parvula HOM05D004873 ORTHO05D006122 4.3e-117 426.8 905 48.5
Thecc.02G248000 Theobroma cacao HOM05D004873 ORTHO05D006122 9.7e-117 425.6 720 51.4
BcaC02g10690 Brassica carinata HOM05D004873 ORTHO05D006122 1.3e-116 425.2 909 45.1
THA.LOC104819547 Tarenaya hassleriana HOM05D004873 ORTHO05D006122 8.2e-116 422.5 866 46.1
THA.LOC104819514 Tarenaya hassleriana HOM05D004873 ORTHO05D006122 4.1e-115 420.2 913 45.8
HPP92_019185 Vanilla planifolia HOM05D004873 ORTHO05D006122 9.1e-115 419.1 909 43.5
Thhalv10023242m.g Eutrema salsugineum HOM05D004873 ORTHO05D006122 1.0e-113 415.6 905 45.7
Lalb_Chr05g0216921 Lupinus albus HOM05D004873 ORTHO05D006122 2.2e-113 414.5 738 46.9
Lj2g0008447 Lotus japonicus HOM05D004873 ORTHO05D006122 5.0e-113 413.3 809 49.9
Hund05991 Selenicereus undatus HOM05D004873 ORTHO05D006122 1.9e-112 411.4 874 49.3
AT1G60200 Arabidopsis thaliana HOM05D004873 ORTHO05D006122 4.7e-111 406.8 791 49.9
SEGI_30430 Sequoiadendron giganteum HOM05D004873 ORTHO05D006122 1.8e-110 404.8 804 50.7
Zm00001eb042420 Zea mays HOM05D004873 ORTHO05D006122 8.8e-102 375.9 791 46.0
TAR629G1177 Trochodendron aralioides HOM05D004873 ORTHO05D006122 2.1e-95 354.8 843 38.7
Ah.03g132650 Amaranthus hybridus HOM05D004873 ORTHO05D006122 7.5e-93 346.3 976 41.4
Zm00001eb179020 Zea mays HOM05D004873 ORTHO05D006122 1.4e-91 342.0 722 46.8
Actinidia08168 Actinidia chinensis HOM05D004873 ORTHO05D006122 6.5e-89 333.2 650 52.9
Mapoly0148s0032 Marchantia polymorpha HOM05D004873 ORTHO05D006122 2.1e-87 328.2 840 44.2
Pp3c25_3310 Physcomitrium patens HOM05D004873 ORTHO05D006122 8.0e-87 326.2 893 42.4
Nitab4.5_0010954g0010 Nicotiana tabacum HOM05D004873 ORTHO05D006122 3.4e-85 320.9 276 64.5
Solyc05g005620.4 Solanum lycopersicum HOM05D004873 ORTHO05D006122 9.8e-85 319.3 320 59.1
Pp3c16_19090 Physcomitrium patens HOM05D004873 ORTHO05D006122 2.0e-82 311.6 846 41.7
C05p51270 Brassica napus HOM05D004873 ORTHO05D006122 7.8e-74 283.1 582 48.6
FvH4_4g34570 Fragaria vesca HOM05D004873 ORTHO05D006122 7.5e-61 240.0 249 60.2
PSO675G2898 Papaver somniferum HOM05D004873 ORTHO05D006122 1.5e-56 225.7 362 46.1
FAN12G0889 Fragaria x ananassa HOM05D004873 ORTHO05D006122 4.3e-56 224.2 238 60.1
SMO117G0118 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 1.7e-52 212.2 853 35.1
CDE01G0488 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 9.2e-51 206.5 217 57.6
Os08g0416400 Oryza sativa ssp. japonica HOM05D004873 ORTHO05D006122 3.9e-49 201.1 410 39.8
CDE02G2726 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 2.6e-45 188.3 265 51.7
CDE01G0278 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 5.4e-43 180.6 267 46.8
CBR_g45271 Chara braunii HOM05D000019 ORTHO05D000002 8.7e-41 173.3 290 44.1
CDE02G2297 Ceratophyllum demersum HOM05D001801 ORTHO05D001739 1.4e-38 166.0 197 49.2
SHI27198 Sapria himalayana HOM05D004873 ORTHO05D006122 1.3e-31 142.9 138 61.6
Aqoxy1G03520 Aquilegia oxysepala HOM05D004873 ORTHO05D006122 1.9e-24 119.0 71 81.7
Cre08.g375084 Chlamydomonas reinhardtii HOM05D004873 ORTHO05D006122 1.2e-21 109.8 178 44.4
Medtr5g034435 Medicago truncatula HOM05D004873 ORTHO05D006122 1.7e-20 105.9 71 71.8
Lsat_1_v5_gn_6_33360 Lactuca sativa HOM05D004873 ORTHO05D026408 7.9e-18 97.1 180 38.3
Lsat_1_v5_gn_5_2020 Lactuca sativa HOM05D004873 ORTHO05D026408 3.3e-16 91.7 195 35.9
SMO119G0006 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 3.7e-15 88.2 88 53.4
PRCOL_00005912 Prasinoderma coloniale HOM05D004873 ORTHO05D006122 2.0e-13 82.4 106 42.5
PSO339G1217 Papaver somniferum HOM05D004873 ORTHO05D006122 7.6e-13 80.5 103 39.8
MCO16G428 Micromonas commoda HOM05D004873 ORTHO05D006122 1.3e-12 79.7 773 31.2
Actinidia27784 Actinidia chinensis HOM05D004873 ORTHO05D026408 3.2e-11 75.1 72 56.9
PSO017G6017 Papaver somniferum HOM05D004873 ORTHO05D006122 1.8e-09 69.3 139 32.4
SMO351G0499 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 1.1e-06 60.1 121 38.8


User provided reference genes

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