Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00154 Erythranthe guttata HOM05D003829 ORTHO05D004943 1.3e-82 309.7 153 100.0
Migut.M00517 Erythranthe guttata HOM05D003829 ORTHO05D004943 3.7e-82 308.1 153 99.3
Migut.O00831 Erythranthe guttata HOM05D003829 ORTHO05D004943 3.7e-82 308.1 153 99.3
MSTRG.22458 Avicennia marina HOM05D003829 ORTHO05D004943 2.1e-77 292.4 153 92.8
SGA_v2.0_scaffold127G34045 Striga asiatica HOM05D003829 ORTHO05D004943 3.9e-76 288.1 153 91.5
SalBow6G2606 Salvia bowleyana HOM05D003829 ORTHO05D004943 1.5e-75 286.2 153 88.9
SGA_v2.0_scaffold116G32207 Striga asiatica HOM05D003829 ORTHO05D004943 2.5e-75 285.4 153 90.2
CAN.G282.43 Capsicum annuum HOM05D003829 ORTHO05D004943 3.1e-73 278.5 153 87.6
Cc00_g04570 Coffea canephora HOM05D003829 ORTHO05D004943 3.1e-73 278.5 153 88.2
Peaxi162Scf00153g00217 Petunia axillaris HOM05D003829 ORTHO05D004943 3.1e-73 278.5 153 86.3
vmacro21052 Vaccinium macrocarpon HOM05D003829 ORTHO05D004943 6.5e-71 270.8 153 87.6
Solyc01g008310.4 Solanum lycopersicum HOM05D003829 ORTHO05D004943 8.5e-71 270.4 153 85.0
Haze_18553 Corylus avellana HOM05D003829 ORTHO05D004943 1.9e-70 269.2 153 83.7
Migut.N03353 Erythranthe guttata HOM05D003829 ORTHO05D004943 1.9e-70 269.2 133 100.0
Haze_25313 Corylus avellana HOM05D003829 ORTHO05D004943 2.5e-70 268.9 153 83.0
Oeu037756.2 Olea europaea HOM05D003829 ORTHO05D004943 3.2e-70 268.5 153 85.6
Sopen01g003830 Solanum pennellii HOM05D003829 ORTHO05D004943 5.5e-70 267.7 153 84.3
Actinidia18960 Actinidia chinensis HOM05D003829 ORTHO05D004943 7.2e-70 267.3 153 85.0
Hund27361 Selenicereus undatus HOM05D003829 ORTHO05D004943 2.1e-69 265.8 153 84.3
Nn3g17616 Nelumbo nucifera HOM05D003829 ORTHO05D004943 2.7e-69 265.4 153 85.0
Psat4g043920 Pisum sativum HOM05D003829 ORTHO05D004943 3.6e-69 265.0 153 81.7
CiPaw.04G139300 Carya illinoinensis HOM05D003829 ORTHO05D004943 7.9e-69 263.8 153 79.7
Actinidia35063 Actinidia chinensis HOM05D003829 ORTHO05D004943 1.0e-68 263.5 153 84.3
CSS0022273 Camellia sinensis var. sinensis HOM05D003829 ORTHO05D004943 1.4e-68 263.1 153 84.3
MD06G1208000 Malus domestica HOM05D003829 ORTHO05D004943 1.4e-68 263.1 155 81.9
Cfa021591 Carpinus fangiana HOM05D003829 ORTHO05D004943 1.8e-68 262.7 153 81.7
Nitab4.5_0001328g0030 Nicotiana tabacum HOM05D003829 ORTHO05D004943 1.8e-68 262.7 153 83.0
Glyma.05G016400 Glycine max HOM05D003829 ORTHO05D004943 2.3e-68 262.3 153 82.4
Phvul.003G180700 Phaseolus vulgaris HOM05D003829 ORTHO05D004943 2.3e-68 262.3 153 82.4
VMungo1215G2863 Vigna mungo HOM05D003829 ORTHO05D004943 2.3e-68 262.3 153 83.0
Gohir.D12G270700 Gossypium hirsutum HOM05D003829 ORTHO05D004943 3.9e-68 261.5 153 81.0
Gorai.008G291100 Gossypium raimondii HOM05D003829 ORTHO05D004943 3.9e-68 261.5 153 81.0
CiPaw.16G081500 Carya illinoinensis HOM05D003829 ORTHO05D004943 5.1e-68 261.2 153 80.4
Lj4g0017423 Lotus japonicus HOM05D003829 ORTHO05D004943 5.1e-68 261.2 153 80.4
Nitab4.5_0006274g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 5.1e-68 261.2 153 82.4
unitig_60.g25860 Utricularia gibba HOM05D003829 ORTHO05D004943 6.7e-68 260.8 153 80.4
Lj4C813G7 Lonicera japonica HOM05D003829 ORTHO05D004943 8.8e-68 260.4 153 81.7
Medtr5g077610 Medicago truncatula HOM05D003829 ORTHO05D004943 8.8e-68 260.4 153 81.0
Nitab4.5_0023875g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 8.8e-68 260.4 153 82.4
Sc12g0007010 Simmondsia chinensis HOM05D003829 ORTHO05D004943 8.8e-68 260.4 153 80.4
Gohir.A12G270300 Gossypium hirsutum HOM05D003829 ORTHO05D004943 1.5e-67 259.6 153 79.7
QL10p021913 Quercus lobata HOM05D003829 ORTHO05D004943 1.5e-67 259.6 153 83.0
COL.COLO4_28877 Corchorus olitorius HOM05D003829 ORTHO05D004943 2.0e-67 259.2 153 81.7
TAR622G1091 Trochodendron aralioides HOM05D003829 ORTHO05D004943 2.6e-67 258.8 153 82.4
unitig_0.g846 Utricularia gibba HOM05D003829 ORTHO05D004943 2.6e-67 258.8 153 81.7
arahy.Tifrunner.gnm1.ann1.03AHKF Arachis hypogaea HOM05D003829 ORTHO05D004943 3.3e-67 258.5 154 81.2
arahy.Tifrunner.gnm1.ann1.WM1R7K Arachis hypogaea HOM05D003829 ORTHO05D004943 4.4e-67 258.1 154 80.5
Nn6g34733 Nelumbo nucifera HOM05D003829 ORTHO05D004943 4.4e-67 258.1 153 81.7
DCAR_011621 Daucus carota HOM05D003829 ORTHO05D004943 5.7e-67 257.7 154 79.9
Hma1.2p1_0744F.1_g211650 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 5.7e-67 257.7 153 80.4
Thecc.03G060100 Theobroma cacao HOM05D003829 ORTHO05D004943 5.7e-67 257.7 153 81.7
Glyma.17G083700 Glycine max HOM05D003829 ORTHO05D004943 7.4e-67 257.3 153 80.4
Lalb_Chr12g0197451 Lupinus albus HOM05D003829 ORTHO05D004943 7.4e-67 257.3 153 77.8
GSVIVG01008188001 Vitis vinifera HOM05D003829 ORTHO05D004943 1.3e-66 256.5 153 81.7
Prupe.5G041000 Prunus persica HOM05D003829 ORTHO05D004943 1.7e-66 256.1 153 79.7
AL2G32240 Arabidopsis lyrata HOM05D003829 ORTHO05D004943 2.2e-66 255.8 153 79.1
THA.LOC104820955 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 2.2e-66 255.8 153 80.4
Eucgr.B02012 Eucalyptus grandis HOM05D003829 ORTHO05D004943 3.7e-66 255.0 153 83.0
Prupe.5G212200 Prunus persica HOM05D003829 ORTHO05D004943 4.8e-66 254.6 153 81.7
Potri.018G070200 Populus trichocarpa HOM05D003829 ORTHO05D004943 6.3e-66 254.2 155 79.4
Medtr4g112680 Medicago truncatula HOM05D003829 ORTHO05D004943 1.1e-65 253.4 153 79.1
MD14G1218400 Malus domestica HOM05D003829 ORTHO05D004943 1.4e-65 253.1 153 77.8
EL10Ac6g14132 Beta vulgaris HOM05D003829 ORTHO05D004943 2.4e-65 252.3 153 77.8
PSO384G2719 Papaver somniferum HOM05D003829 ORTHO05D004943 3.1e-65 251.9 155 76.1
SEGI_15169 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 3.1e-65 251.9 153 79.1
CDE10G0816 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 5.3e-65 251.1 153 79.1
PSO676G0009 Papaver somniferum HOM05D003829 ORTHO05D004943 5.3e-65 251.1 155 76.1
Sp6g28120 Schrenkiella parvula HOM05D003829 ORTHO05D004943 5.3e-65 251.1 154 79.9
Carub.0002s1941 Capsella rubella HOM05D003829 ORTHO05D004943 1.2e-64 250.0 153 76.5
Ciclev10014690m.g Citrus clementina HOM05D003829 ORTHO05D004943 1.6e-64 249.6 153 77.8
Aa31LG11G13610 Aethionema arabicum HOM05D003829 ORTHO05D004943 2.0e-64 249.2 153 79.1
CARHR065490 Cardamine hirsuta HOM05D003829 ORTHO05D004943 2.0e-64 249.2 153 77.8
ECA240G3266 Erigeron canadensis HOM05D003829 ORTHO05D003544 2.0e-64 249.2 154 76.6
FvH4_5g13020 Fragaria vesca HOM05D003829 ORTHO05D004943 2.0e-64 249.2 166 74.1
RcHm_v2.0_Chr7g0184111 Rosa chinensis HOM05D003829 ORTHO05D004943 2.0e-64 249.2 166 74.1
Duzib084G0834 Durio zibethinus HOM05D003829 ORTHO05D004943 2.6e-64 248.8 153 78.4
FAN13G0156 Fragaria x ananassa HOM05D003829 ORTHO05D004943 3.5e-64 248.4 166 73.5
Sed0025371 Sechium edule HOM05D003829 ORTHO05D004943 3.5e-64 248.4 153 79.1
TWI73G0611 Tripterygium wilfordii HOM05D003829 ORTHO05D004943 3.5e-64 248.4 156 77.6
COL.COLO4_30269 Corchorus olitorius HOM05D003829 ORTHO05D004943 4.5e-64 248.1 182 69.2
THA.LOC104806554 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 4.5e-64 248.1 153 78.4
HanXRQChr03g0078721 Helianthus annuus HOM05D003829 ORTHO05D004943 5.9e-64 247.7 154 77.3
FAN08G2534 Fragaria x ananassa HOM05D003829 ORTHO05D004943 1.0e-63 246.9 166 73.5
Pp3c22_15340 Physcomitrium patens HOM05D003829 ORTHO05D004943 1.0e-63 246.9 153 77.8
FAN18G1085 Fragaria x ananassa HOM05D003829 ORTHO05D004943 1.3e-63 246.5 166 73.5
CsaV3_1G003150 Cucumis sativus L. HOM05D003829 ORTHO05D004943 1.7e-63 246.1 153 79.1
SEGI_31614 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 1.7e-63 246.1 153 77.8
ATR0789G018 Amborella trichopoda HOM05D003829 ORTHO05D004943 2.9e-63 245.4 154 76.6
ClCG06G015260 Citrullus lanatus HOM05D003829 ORTHO05D004943 2.9e-63 245.4 153 79.7
Potri.013G068100 Populus trichocarpa HOM05D003829 ORTHO05D004943 3.8e-63 245.0 156 75.6
AT1G72550 Arabidopsis thaliana HOM05D003829 ORTHO05D004943 5.0e-63 244.6 153 76.5
HanXRQChr09g0270121 Helianthus annuus HOM05D003829 ORTHO05D004943 5.0e-63 244.6 155 77.4
Zm00001eb267900 Zea mays HOM05D003829 ORTHO05D004943 6.5e-63 244.2 154 76.6
Atru.chr10.875 Acer truncatum HOM05D003829 ORTHO05D004943 8.5e-63 243.8 153 76.5
C09p61050 Brassica napus HOM05D003829 ORTHO05D004943 1.5e-62 243.0 154 76.0
BolC9t58950H Brassica oleracea HOM05D003829 ORTHO05D004943 1.5e-62 243.0 154 76.0
Thhalv10007156m.g Eutrema salsugineum HOM05D003829 ORTHO05D004943 1.5e-62 243.0 153 78.4
A10p23060 Brassica napus HOM05D003829 ORTHO05D004943 3.2e-62 241.9 154 75.3
BraA10t44375Z Brassica rapa HOM05D003829 ORTHO05D004943 3.2e-62 241.9 154 75.3
Os05g0558900 Oryza sativa ssp. japonica HOM05D003829 ORTHO05D004943 4.2e-62 241.5 156 76.9
PGR119G2172 Punica granatum HOM05D003829 ORTHO05D004943 4.2e-62 241.5 157 73.2
AUR62014243 Chenopodium quinoa HOM05D003829 ORTHO05D004943 5.5e-62 241.1 163 71.2
Manes.06G055300 Manihot esculenta HOM05D003829 ORTHO05D004943 7.2e-62 240.7 153 76.5
AUR62008644 Chenopodium quinoa HOM05D003829 ORTHO05D004943 1.2e-61 240.0 163 71.2
MELO3C017266.2 Cucumis melo HOM05D003829 ORTHO05D004943 4.7e-61 238.0 159 75.5
Pp3c19_13120 Physcomitrium patens HOM05D003829 ORTHO05D004943 1.0e-60 236.9 153 73.9
Ah.03g138770 Amaranthus hybridus HOM05D003829 ORTHO05D004943 3.0e-60 235.3 133 82.7
BcaC04g18917 Brassica carinata HOM05D003829 ORTHO05D004943 8.8e-60 233.8 154 73.4
Mapoly0013s0023 Marchantia polymorpha HOM05D003829 ORTHO05D004943 5.7e-59 231.1 154 72.7
Cpa.g.sc271.5 Carica papaya HOM05D003829 ORTHO05D004943 5.3e-57 224.6 153 73.2
AagrBONN_evm.TU.Sc2ySwM_199.43 Anthoceros agrestis HOM05D003829 ORTHO05D004943 7.0e-57 224.2 153 70.6
SMO351G0192 Selaginella moellendorffii HOM05D003829 ORTHO05D004943 9.1e-57 223.8 153 70.6
Lsat_1_v5_gn_1_11920 Lactuca sativa HOM05D003829 ORTHO05D004943 1.3e-55 219.9 137 76.6
HPP92_012745 Vanilla planifolia HOM05D003829 ORTHO05D004943 3.2e-54 215.3 154 69.5
HPP92_013144 Vanilla planifolia HOM05D003829 ORTHO05D004943 6.1e-53 211.1 154 67.5
Dinv38617 Davidia involucrata HOM05D003829 ORTHO05D004943 2.3e-52 209.1 123 81.3
Sabra13G0059400 Salix brachista HOM05D003829 ORTHO05D004943 6.8e-52 207.6 137 73.7
Ca_21737_v3 Cicer arietinum L. HOM05D003829 ORTHO05D004943 2.6e-51 205.7 139 75.5
Aqoxy6G02137 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 1.3e-50 203.4 153 64.7
Cre13.g603900 Chlamydomonas reinhardtii HOM05D003829 ORTHO05D004943 1.7e-50 203.0 163 60.7
Aqoxy1G02793 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 6.3e-50 201.1 153 63.4
Rhsim01G0138800 Rhododendron simsii HOM05D003829 ORTHO05D004943 2.7e-48 195.7 115 84.3
CBR_g49053 Chara braunii HOM05D003829 ORTHO05D004943 1.7e-47 193.0 133 70.7
MCO09G827 Micromonas commoda HOM05D003829 ORTHO05D004943 6.8e-44 181.0 161 57.1
Haze_26625 Corylus avellana HOM05D003829 ORTHO05D004943 4.0e-36 155.2 164 50.0
PRCOL_00001438 Prasinoderma coloniale HOM05D003829 ORTHO05D004943 1.1e-33 147.1 139 53.2
TPR.G23867 Trifolium pratense HOM05D003829 ORTHO05D004943 2.7e-32 142.5 82 80.5
Cfa026018 Carpinus fangiana HOM05D003829 ORTHO05D004943 6.6e-31 137.9 155 47.7
Sp5g27630 Schrenkiella parvula HOM05D003829 ORTHO05D004943 6.6e-31 137.9 82 79.3
CANSAT80G2907 Cannabis sativa HOM05D003829 ORTHO05D004943 1.5e-30 136.7 83 77.1
CDE10G0520 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 1.5e-30 136.7 81 77.8
Eucgr.B00970 Eucalyptus grandis HOM05D003829 ORTHO05D004943 1.5e-30 136.7 83 78.3
QL10p029183 Quercus lobata HOM05D003829 ORTHO05D004943 2.1e-29 132.9 83 73.5
Hma1.2p1_0340F.1_g130220 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 3.4e-27 125.6 127 54.3
CiPaw.15G121900 Carya illinoinensis HOM05D003829 ORTHO05D004943 2.2e-26 122.9 74 74.3
BcaB08g36877 Brassica carinata HOM05D003829 ORTHO05D004943 2.9e-26 122.5 110 59.1
AagrBONN_evm.TU.Sc2ySwM_368.2791 Anthoceros agrestis HOM05D003829 ORTHO05D004943 1.4e-25 120.2 81 66.7
Atru.chr11.247 Acer truncatum HOM05D003829 ORTHO05D004943 2.4e-25 119.4 81 70.4
TPR.G25992 Trifolium pratense HOM05D003829 ORTHO05D015515 2.0e-24 116.3 71 78.9
HPP92_013145 Vanilla planifolia HOM05D003829 ORTHO05D004943 2.1e-21 106.3 73 71.2
Duzib205G0197 Durio zibethinus HOM05D003829 ORTHO05D004943 7.3e-14 81.3 46 80.4
Lsat_1_v5_gn_4_30320 Lactuca sativa HOM05D003829 ORTHO05D015515 1.3e-10 70.5 38 81.6
PSO339G3234 Papaver somniferum HOM05D003829 ORTHO05D004943 2.9e-10 69.3 47 70.2
A03p61070 Brassica napus HOM05D003829 ORTHO05D028154 1.2e-08 63.9 45 68.9
BraA03t15147Z Brassica rapa HOM05D040596 ORTHO05D028154 1.2e-08 63.9 45 68.9
BolC1t02481H Brassica oleracea HOM05D003829 ORTHO05D015515 3.5e-08 62.4 48 66.7
BcaC03g18463 Brassica carinata HOM05D003829 ORTHO05D004943 6.0e-08 61.6 44 63.6
BolC2t06732H Brassica oleracea HOM05D003829 ORTHO05D004943 1.0e-07 60.8 43 65.1
BcaC09g50448 Brassica carinata HOM05D015232 ORTHO05D015515 1.7e-07 60.1 48 62.5
C01p25310 Brassica napus HOM05D015232 ORTHO05D015515 1.7e-07 60.1 48 62.5
A10p07150 Brassica napus HOM05D015232 ORTHO05D015515 3.0e-07 59.3 48 62.5
A05p14630 Brassica napus HOM05D015232 ORTHO05D015515 1.9e-06 56.6 47 59.6
BolC5t30108H Brassica oleracea HOM05D003829 ORTHO05D028154 7.3e-06 54.7 49 55.1


User provided reference genes

Program Settings