Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 4.0e-276 954.1 475 100.0
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 1.8e-199 699.5 478 74.5
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 2.6e-195 685.6 475 73.1
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 3.4e-179 632.1 469 68.9
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 2.7e-168 595.9 484 65.5
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 8.8e-167 590.9 484 65.1
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 1.1e-164 583.9 474 65.0
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 2.0e-163 579.7 484 64.3
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 3.5e-163 578.9 483 65.0
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 1.5e-161 573.5 483 64.2
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 6.8e-159 564.7 480 61.9
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 4.1e-156 555.4 485 61.4
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 9.1e-156 554.3 482 61.8
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 3.5e-155 552.4 495 60.0
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 8.5e-154 547.7 505 59.4
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.5e-153 546.2 468 63.2
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 5.5e-153 545.0 515 57.7
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.8e-152 542.7 470 62.1
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 4.7e-152 542.0 480 61.0
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 1.7e-149 533.5 455 63.3
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 1.1e-148 530.8 481 58.2
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 1.2e-147 527.3 479 59.5
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 2.7e-147 526.2 478 59.0
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 7.8e-147 524.6 478 57.9
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 1.3e-146 523.9 478 57.9
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 8.6e-146 521.2 478 57.7
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 2.5e-145 519.6 443 61.9
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 7.3e-145 518.1 481 56.3
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 2.1e-144 516.5 478 57.5
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 2.1e-144 516.5 480 55.6
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 8.0e-144 514.6 481 56.1
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 8.0e-144 514.6 480 56.2
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 8.0e-144 514.6 482 59.1
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 8.0e-144 514.6 480 56.2
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 2.3e-143 513.1 479 57.8
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 3.0e-143 512.7 429 62.0
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 4.0e-143 512.3 483 56.1
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 4.0e-143 512.3 479 56.4
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 4.0e-143 512.3 474 57.6
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 6.8e-143 511.5 432 61.6
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 6.8e-143 511.5 483 56.1
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 5.7e-142 508.4 481 57.2
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 5.7e-142 508.4 481 56.8
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 7.5e-142 508.1 481 57.4
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 2.2e-141 506.5 478 57.3
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 3.7e-141 505.8 460 58.3
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 3.7e-141 505.8 472 57.4
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 6.4e-141 505.0 477 57.2
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 6.4e-141 505.0 478 55.9
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 7.0e-140 501.5 475 55.2
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 7.0e-140 501.5 406 65.5
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 2.7e-139 499.6 481 55.7
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 7.8e-139 498.0 453 59.6
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 1.0e-138 497.7 478 54.0
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 1.5e-137 493.8 480 59.4
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 5.6e-137 491.9 452 57.3
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 5.6e-137 491.9 463 56.2
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.0e-135 487.6 462 55.4
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 3.1e-135 486.1 499 54.5
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 8.9e-135 484.6 479 54.9
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 2.0e-134 483.4 476 54.6
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 3.4e-134 482.6 478 54.6
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 5.8e-134 481.9 381 66.9
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 5.8e-134 481.9 477 54.9
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 7.5e-134 481.5 462 55.8
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 9.8e-134 481.1 477 54.1
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 9.8e-134 481.1 479 54.7
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 2.9e-133 479.6 474 54.6
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 2.9e-133 479.6 474 54.9
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 1.1e-132 477.6 478 54.0
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 1.9e-132 476.9 474 54.4
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 1.6e-131 473.8 474 54.6
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 2.0e-131 473.4 478 54.2
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 2.7e-131 473.0 478 53.8
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 3.5e-131 472.6 478 53.1
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 4.6e-131 472.2 453 56.1
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 7.8e-131 471.5 480 53.1
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 7.8e-131 471.5 400 60.8
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 1.0e-130 471.1 476 53.4
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 2.3e-130 469.9 477 54.3
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 2.5e-129 466.5 475 53.3
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 3.3e-129 466.1 489 53.2
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 4.7e-128 462.2 484 52.3
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 1.1e-127 461.1 481 52.4
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 2.0e-126 456.8 579 46.3
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 9.9e-126 454.5 449 54.6
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 9.2e-124 448.0 491 52.5
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 2.7e-123 446.4 527 49.1
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 1.0e-122 444.5 353 65.4
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 1.0e-122 444.5 353 65.4
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 1.2e-120 437.6 393 59.0
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 1.4e-119 434.1 511 49.3
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 2.1e-115 420.2 366 62.0
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 5.6e-113 412.1 454 50.9
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 3.5e-107 392.9 339 59.9
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 6.6e-106 388.7 486 47.3
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 1.1e-103 381.3 401 49.9
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 3.8e-101 372.9 332 57.5
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 2.2e-93 347.1 478 43.5
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 3.7e-88 329.7 305 56.7
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 1.9e-84 317.4 499 37.5
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 1.1e-81 308.1 391 45.0
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 2.9e-77 293.5 260 56.2
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.9e-73 280.8 222 64.0
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 4.3e-73 279.6 354 44.9
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 4.1e-71 273.1 416 42.5
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 1.2e-70 271.6 517 35.0
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 1.3e-69 268.1 234 58.5
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 2.6e-62 243.8 455 36.9
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 1.4e-60 238.0 355 41.1
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 3.3e-57 226.9 233 55.8
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.8e-50 204.5 394 36.3
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 1.5e-49 201.4 302 37.4
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 9.4e-44 182.2 229 46.3
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 9.4e-44 182.2 175 52.0
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 1.2e-41 175.3 162 58.0
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 1.2e-41 175.3 162 58.0
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 3.3e-36 157.1 186 48.9
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 7.2e-36 156.0 165 50.9
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 2.3e-34 151.0 499 27.3
MD12G1074100 Malus domestica HOM05D005933 ORTHO05D007366 4.1e-31 140.2 147 51.0
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 3.5e-30 137.1 148 52.0
BcaNung03522 Brassica carinata HOM05D005933 ORTHO05D007366 7.8e-30 136.0 140 52.1
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.7e-29 134.8 105 63.8
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.4e-23 115.2 118 51.7
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 2.8e-19 100.9 377 26.0
Dinv12483 Davidia involucrata HOM05D005933 ORTHO05D007366 2.6e-17 94.4 113 50.4
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 2.9e-16 90.9 69 62.3
Rhsim03G0024000 Rhododendron simsii HOM05D005933 ORTHO05D007366 8.6e-13 79.3 52 75.0
Rhsim03G0022600 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.9e-12 78.2 52 75.0
PRCOL_00001836 Prasinoderma coloniale HOM05D005933 ORTHO05D007366 2.1e-11 74.7 336 26.5
SHI32976 Sapria himalayana HOM05D000105 ORTHO05D000023 1.8e-10 71.6 123 39.8
Nn8g40507 Nelumbo nucifera HOM05D005933 ORTHO05D007366 5.8e-09 66.6 90 41.1


User provided reference genes

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