Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00740 Erythranthe guttata HOM05D002784 ORTHO05D031482 1.7e-76 289.3 150 100.0
MSTRG.19587 Avicennia marina HOM05D002784 ORTHO05D003113 5.5e-30 134.8 153 56.2
unitig_749.g14096 Utricularia gibba HOM05D002784 ORTHO05D003113 2.3e-28 129.4 152 53.3
Oeu055889.1 Olea europaea HOM05D002784 ORTHO05D031482 7.4e-27 124.4 157 51.0
Oeu058080.1 Olea europaea HOM05D002784 ORTHO05D003113 9.0e-25 117.5 157 50.3
SGA_v2.0_scaffold17G08182 Striga asiatica HOM05D002784 ORTHO05D003113 4.5e-24 115.2 167 50.9
Nitab4.5_0000054g0220 Nicotiana tabacum HOM05D002784 ORTHO05D003113 1.4e-17 93.6 155 39.4
DCAR_012071 Daucus carota HOM05D002784 ORTHO05D003113 5.3e-17 91.7 151 40.4
Nitab4.5_0007401g0010 Nicotiana tabacum HOM05D002784 ORTHO05D003113 5.3e-17 91.7 155 38.7
Peaxi162Scf00231g00021 Petunia axillaris HOM05D002784 ORTHO05D003113 5.3e-17 91.7 151 38.4
CAN.G210.14 Capsicum annuum HOM05D002784 ORTHO05D003113 3.4e-16 89.0 148 39.2
Cc06_g09730 Coffea canephora HOM05D002784 ORTHO05D003113 2.2e-15 86.3 151 41.7
CSS0001462 Camellia sinensis var. sinensis HOM05D002784 ORTHO05D003113 2.9e-15 85.9 157 41.4
Dinv41609 Davidia involucrata HOM05D002784 ORTHO05D003113 5.0e-15 85.1 155 40.6
CSS0034731 Camellia sinensis var. sinensis HOM05D002784 ORTHO05D003113 6.5e-15 84.7 157 40.8
PGSC0003DMG400030219 Solanum tuberosum HOM05D002784 ORTHO05D003113 1.1e-14 84.0 151 36.4
Dinv36638 Davidia involucrata HOM05D002784 ORTHO05D003113 3.2e-14 82.4 158 39.9
Solyc07g024000.3 Solanum lycopersicum HOM05D002784 ORTHO05D003113 4.2e-14 82.0 66 56.1
Sopen07g012230 Solanum pennellii HOM05D002784 ORTHO05D003113 4.2e-14 82.0 66 56.1
vmacro06219 Vaccinium macrocarpon HOM05D002784 ORTHO05D003113 4.6e-13 78.6 158 41.1
Hma1.2p1_0018F.1_g013600 Hydrangea macrophylla HOM05D002784 ORTHO05D003113 1.9e-11 73.2 159 35.2
Manes.16G115400 Manihot esculenta HOM05D002784 ORTHO05D003113 1.9e-11 73.2 156 35.3
Rhsim03G0241500 Rhododendron simsii HOM05D002784 ORTHO05D003113 2.5e-11 72.8 115 45.2
Lsat_1_v5_gn_8_95280 Lactuca sativa HOM05D002784 ORTHO05D003113 1.3e-10 70.5 151 37.7
Duzib150G0136 Durio zibethinus HOM05D002784 ORTHO05D003113 1.7e-10 70.1 116 42.2
Gohir.D05G024900 Gossypium hirsutum HOM05D002784 ORTHO05D003113 8.2e-10 67.8 116 43.1
Thecc.09G109400 Theobroma cacao HOM05D002784 ORTHO05D003113 8.2e-10 67.8 128 39.8
Actinidia20375 Actinidia chinensis HOM05D002784 ORTHO05D003113 1.1e-09 67.4 151 40.4
Actinidia09422 Actinidia chinensis HOM05D002784 ORTHO05D003113 3.1e-09 65.9 114 43.9
Gorai.009G025000 Gossypium raimondii HOM05D002784 ORTHO05D003113 3.1e-09 65.9 116 42.2
HanXRQChr06g0179981 Helianthus annuus HOM05D002784 ORTHO05D003113 4.1e-09 65.5 153 35.9
Cpa.g.sc23.100 Carica papaya HOM05D002784 ORTHO05D003113 6.9e-09 64.7 163 37.4
Sabra18G0068300 Salix brachista HOM05D002784 ORTHO05D003113 9.1e-09 64.3 112 42.9
HanXRQChr10g0317921 Helianthus annuus HOM05D002784 ORTHO05D003113 1.2e-08 63.9 152 34.9
Potri.018G081200 Populus trichocarpa HOM05D002784 ORTHO05D003113 1.5e-08 63.5 112 42.0
QL02p085176 Quercus lobata HOM05D002784 ORTHO05D003113 2.0e-08 63.2 159 34.6
GSVIVG01015384001 Vitis vinifera HOM05D002784 ORTHO05D003113 2.0e-08 63.2 151 37.1
Duzib168G0380 Durio zibethinus HOM05D002784 ORTHO05D003113 2.6e-08 62.8 151 35.1
MD02G1045900 Malus domestica HOM05D002784 ORTHO05D003113 5.9e-08 61.6 113 37.2
Lj7A651T30 Lonicera japonica HOM05D002784 ORTHO05D003113 1.0e-07 60.8 150 32.7
MBI01_g06522_MAGBIO Magnolia biondii HOM05D002784 ORTHO05D003113 1.0e-07 60.8 166 33.7
THA.LOC104808765 Tarenaya hassleriana HOM05D002784 ORTHO05D003113 1.0e-07 60.8 151 35.1
CsaV3_1G024260 Cucumis sativus L. HOM05D002784 ORTHO05D003113 2.9e-07 59.3 159 35.2
Lj2g0023921 Lotus japonicus HOM05D002784 ORTHO05D003113 2.9e-07 59.3 103 38.8
AUR62010985 Chenopodium quinoa HOM05D002784 ORTHO05D003113 3.8e-07 58.9 113 38.1
COL.COLO4_34872 Corchorus olitorius HOM05D002784 ORTHO05D003113 3.8e-07 58.9 122 37.7
HPP92_009033 Vanilla planifolia HOM05D002784 ORTHO05D003113 6.5e-07 58.2 120 35.8
HPP92_009035 Vanilla planifolia HOM05D002784 ORTHO05D003113 6.5e-07 58.2 120 35.8
Carub.0007s2941 Capsella rubella HOM05D002784 ORTHO05D003113 8.5e-07 57.8 134 35.8
Manes.03G021500 Manihot esculenta HOM05D002784 ORTHO05D003113 8.5e-07 57.8 157 33.1
TWI34G0459 Tripterygium wilfordii HOM05D002784 ORTHO05D003113 8.5e-07 57.8 120 37.5
Sed0006908 Sechium edule HOM05D002784 ORTHO05D003113 1.4e-06 57.0 118 33.1
EL10Ac8g18487 Beta vulgaris HOM05D002784 ORTHO05D003113 3.2e-06 55.8 111 36.9
MELO3C025347.2 Cucumis melo HOM05D002784 ORTHO05D003113 3.2e-06 55.8 159 33.3
Gohir.A05G023400 Gossypium hirsutum HOM05D002784 ORTHO05D003113 3.2e-06 55.8 83 45.8
Nn2g11727 Nelumbo nucifera HOM05D002784 ORTHO05D003113 3.2e-06 55.8 119 31.9
AUR62021494 Chenopodium quinoa HOM05D002784 ORTHO05D003113 5.5e-06 55.1 117 38.5
Phvul.004G163900 Phaseolus vulgaris HOM05D002784 ORTHO05D003113 5.5e-06 55.1 158 33.5
TAR383G0815 Trochodendron aralioides HOM05D002784 ORTHO05D003113 5.5e-06 55.1 113 37.2
Ciclev10008039m.g Citrus clementina HOM05D002784 ORTHO05D003113 7.2e-06 54.7 91 35.2
Hund09209 Selenicereus undatus HOM05D002784 ORTHO05D003113 7.2e-06 54.7 117 37.6
Carub.0005s0753 Capsella rubella HOM05D002784 ORTHO05D003113 9.4e-06 54.3 133 34.6
CARHR218740 Cardamine hirsuta HOM05D002784 ORTHO05D003113 9.4e-06 54.3 150 36.0
Glyma.07G085700 Glycine max HOM05D002784 ORTHO05D003113 9.4e-06 54.3 117 32.5


User provided reference genes

Program Settings