Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00418 Erythranthe guttata HOM05D005876 ORTHO05D007326 5.1e-168 594.3 305 100.0
MSTRG.5723 Avicennia marina HOM05D005876 ORTHO05D007326 7.5e-119 431.0 301 75.1
SalBow3G2410 Salvia bowleyana HOM05D005876 ORTHO05D007326 3.0e-112 409.1 286 73.8
SalBow3G3945 Salvia bowleyana HOM05D005876 ORTHO05D007326 5.2e-112 408.3 286 73.8
SGA_v2.0_scaffold75G24879 Striga asiatica HOM05D005876 ORTHO05D007326 2.6e-111 406.0 312 68.9
Cc11_g02990 Coffea canephora HOM05D005876 ORTHO05D007326 4.3e-98 362.1 300 61.3
CSS0011524 Camellia sinensis var. sinensis HOM05D005876 ORTHO05D007326 1.1e-96 357.5 298 61.4
Sopen09g002270 Solanum pennellii HOM05D005876 ORTHO05D007326 8.3e-94 347.8 309 58.3
Solyc09g007370.4 Solanum lycopersicum HOM05D005876 ORTHO05D007326 1.9e-93 346.7 309 57.6
PGSC0003DMG400001766 Solanum tuberosum HOM05D005876 ORTHO05D007326 4.1e-93 345.5 309 57.3
Dinv37257 Davidia involucrata HOM05D005876 ORTHO05D007326 5.4e-93 345.1 300 59.0
CAN.G1676.1 Capsicum annuum HOM05D005876 ORTHO05D007326 3.9e-91 339.0 297 59.6
MD12G1123900 Malus domestica HOM05D005876 ORTHO05D007326 3.9e-91 339.0 308 58.4
Prupe.4G230000 Prunus persica HOM05D005876 ORTHO05D007326 6.6e-91 338.2 308 59.7
Atru.chr8.2559 Acer truncatum HOM05D005876 ORTHO05D007326 7.3e-90 334.7 304 59.9
Duzib093G1198 Durio zibethinus HOM05D005876 ORTHO05D007326 1.6e-89 333.6 300 58.3
Hma1.2p1_0350F.1_g132760 Hydrangea macrophylla HOM05D005876 ORTHO05D007326 4.0e-88 328.9 314 56.4
Actinidia13103 Actinidia chinensis HOM05D005876 ORTHO05D007326 2.9e-86 322.8 290 58.6
Gorai.002G249900 Gossypium raimondii HOM05D005876 ORTHO05D007326 1.1e-85 320.9 299 56.9
CANSAT80G1885 Cannabis sativa HOM05D005876 ORTHO05D007326 1.4e-85 320.5 300 57.3
FAN02G3306 Fragaria x ananassa HOM05D005876 ORTHO05D007326 3.2e-85 319.3 303 57.8
Thecc.05G054500 Theobroma cacao HOM05D005876 ORTHO05D007326 3.2e-85 319.3 297 56.9
Gohir.D01G205600 Gossypium hirsutum HOM05D005876 ORTHO05D007326 1.2e-84 317.4 297 57.2
Gohir.A01G216800 Gossypium hirsutum HOM05D005876 ORTHO05D007326 2.1e-84 316.6 299 56.2
TAR375G0626 Trochodendron aralioides HOM05D005876 ORTHO05D007326 1.0e-83 314.3 309 54.0
Glyma.11G012100 Glycine max HOM05D005876 ORTHO05D007326 1.3e-83 313.9 302 57.9
Ciclev10012269m.g Citrus clementina HOM05D005876 ORTHO05D007326 6.6e-83 311.6 302 56.0
CSS0006806 Camellia sinensis var. sinensis HOM05D005876 ORTHO05D007326 1.2e-81 307.4 231 64.5
CiPaw.09G179800 Carya illinoinensis HOM05D005876 ORTHO05D007326 4.7e-81 305.4 314 53.8
MD04G1104000 Malus domestica HOM05D005876 ORTHO05D007326 8.1e-81 304.7 310 55.5
GSVIVG01025628001 Vitis vinifera HOM05D005876 ORTHO05D007326 2.4e-80 303.1 300 55.7
FAN14G3435 Fragaria x ananassa HOM05D005876 ORTHO05D007326 8.9e-80 301.2 317 53.6
Lj1g0007669 Lotus japonicus HOM05D005876 ORTHO05D007326 2.0e-79 300.1 298 56.7
LjContig00222g0022274 Lotus japonicus HOM05D005876 ORTHO05D007326 2.0e-79 300.1 298 56.4
MBI19_g11838_MAGBIO Magnolia biondii HOM05D005876 ORTHO05D007326 3.4e-79 299.3 309 54.0
Nn2g10678 Nelumbo nucifera HOM05D005876 ORTHO05D007326 1.7e-78 297.0 312 53.8
Nitab4.5_0005274g0030 Nicotiana tabacum HOM05D005876 ORTHO05D007326 4.9e-78 295.4 234 62.0
Sc23g0005710 Simmondsia chinensis HOM05D005876 ORTHO05D007326 5.4e-77 292.0 297 54.9
RcHm_v2.0_Chr3g0468881 Rosa chinensis HOM05D005876 ORTHO05D007326 1.6e-76 290.4 306 52.6
QL07p024280 Quercus lobata HOM05D005876 ORTHO05D007326 2.1e-76 290.0 301 51.5
Nitab4.5_0001763g0100 Nicotiana tabacum HOM05D005876 ORTHO05D007326 2.7e-76 289.7 313 51.8
Manes.09G081419 Manihot esculenta HOM05D005876 ORTHO05D007326 3.5e-76 289.3 300 55.0
FvH4_6g15400 Fragaria vesca HOM05D005876 ORTHO05D007326 2.3e-75 286.6 309 52.1
TAR633G1288 Trochodendron aralioides HOM05D005876 ORTHO05D007326 2.3e-75 286.6 305 51.8
vmacro08700 Vaccinium macrocarpon HOM05D005876 ORTHO05D007326 3.0e-75 286.2 391 44.0
Phvul.002G038100 Phaseolus vulgaris HOM05D005876 ORTHO05D007326 3.3e-74 282.7 295 52.2
Potri.001G033900 Populus trichocarpa HOM05D005876 ORTHO05D007326 2.1e-73 280.0 297 51.2
QL03p054300 Quercus lobata HOM05D005876 ORTHO05D007326 2.1e-73 280.0 301 50.8
Eucgr.D00282 Eucalyptus grandis HOM05D005876 ORTHO05D007326 3.1e-72 276.2 309 49.5
Cfa017510 Carpinus fangiana HOM05D000666 ORTHO05D001727 4.5e-71 272.3 277 53.8
Lj2C107T12 Lonicera japonica HOM05D005876 ORTHO05D007326 9.9e-71 271.2 272 53.7
Peaxi162Scf00005g04511 Petunia axillaris HOM05D005876 ORTHO05D007326 9.9e-71 271.2 256 55.5
ECA238G3410 Erigeron canadensis HOM05D005876 ORTHO05D007326 1.1e-69 267.7 307 51.1
Haze_20644 Corylus avellana HOM05D005876 ORTHO05D007326 3.2e-69 266.2 302 51.0
ATR0618G001 Amborella trichopoda HOM05D005876 ORTHO05D007326 2.7e-68 263.1 299 50.2
TPR.G38017 Trifolium pratense HOM05D005876 ORTHO05D007326 1.8e-67 260.4 315 48.9
THA.LOC104826952 Tarenaya hassleriana HOM05D005876 ORTHO05D007326 2.3e-67 260.0 299 48.5
Lsat_1_v5_gn_3_120281 Lactuca sativa HOM05D005876 ORTHO05D007326 8.7e-67 258.1 301 51.5
AT2G43190 Arabidopsis thaliana HOM05D005876 ORTHO05D007326 1.9e-66 256.9 301 50.5
AL4G41850 Arabidopsis lyrata HOM05D005876 ORTHO05D007326 4.3e-66 255.8 298 50.0
CARHR138250 Cardamine hirsuta HOM05D005876 ORTHO05D007326 5.6e-66 255.4 302 47.7
CDE05G1905 Ceratophyllum demersum HOM05D005876 ORTHO05D007326 5.6e-66 255.4 244 53.3
TWI74G1051 Tripterygium wilfordii HOM05D005876 ORTHO05D007326 5.6e-66 255.4 277 51.6
FAN09G4005 Fragaria x ananassa HOM05D005876 ORTHO05D007326 1.6e-65 253.8 279 52.0
VMungo1215G0672 Vigna mungo HOM05D005876 ORTHO05D007326 1.6e-65 253.8 296 49.0
Carub.0004s2566 Capsella rubella HOM05D005876 ORTHO05D007326 2.1e-65 253.4 300 48.3
Lalb_Chr01g0022971 Lupinus albus HOM05D005876 ORTHO05D007326 1.4e-64 250.8 302 48.3
Oeu060085.1 Olea europaea HOM05D005876 ORTHO05D007326 1.8e-64 250.4 271 55.0
EL10Ac7g17355 Beta vulgaris HOM05D005876 ORTHO05D007326 2.4e-64 250.0 299 49.2
HanXRQChr07g0195281 Helianthus annuus HOM05D005876 ORTHO05D007326 3.1e-64 249.6 291 49.5
DCAR_009286 Daucus carota HOM05D005876 ORTHO05D007326 2.0e-63 246.9 302 47.4
Aa31LG1G25010 Aethionema arabicum HOM05D005876 ORTHO05D007326 9.9e-63 244.6 302 47.0
Sed0002034 Sechium edule HOM05D005876 ORTHO05D007326 8.4e-62 241.5 302 45.4
Psat0s769g0080 Pisum sativum HOM05D005876 ORTHO05D007326 2.4e-61 240.0 308 47.1
PSO063G0740 Papaver somniferum HOM05D005876 ORTHO05D007326 4.2e-61 239.2 285 47.4
Sp4g25310 Schrenkiella parvula HOM05D005876 ORTHO05D007326 2.1e-60 236.9 302 46.7
Thhalv10001741m.g Eutrema salsugineum HOM05D005876 ORTHO05D007326 7.9e-60 235.0 224 54.9
Aqoxy4G03207 Aquilegia oxysepala HOM05D005876 ORTHO05D007326 1.0e-59 234.6 309 45.0
CsaV3_3G035590 Cucumis sativus L. HOM05D005876 ORTHO05D007326 1.0e-59 234.6 299 46.2
arahy.Tifrunner.gnm1.ann1.09MUKR Arachis hypogaea HOM05D005876 ORTHO05D007326 1.5e-58 230.7 278 49.3
MELO3C009318.2 Cucumis melo HOM05D005876 ORTHO05D007326 1.9e-58 230.3 304 44.4
Sabra01G0024100 Salix brachista HOM05D001063 ORTHO05D000986 1.9e-58 230.3 285 47.0
A05p03670 Brassica napus HOM05D005876 ORTHO05D007326 1.3e-57 227.6 219 53.9
arahy.Tifrunner.gnm1.ann1.SSK647 Arachis hypogaea HOM05D005876 ORTHO05D007326 1.6e-57 227.3 278 49.6
BraA05t19352Z Brassica rapa HOM05D005876 ORTHO05D007326 2.1e-57 226.9 219 53.9
Cpa.g.sc45.33 Carica papaya HOM05D005876 ORTHO05D007326 2.8e-57 226.5 308 44.8
COL.COLO4_06720 Corchorus olitorius HOM05D005876 ORTHO05D007326 2.8e-57 226.5 234 53.4
Ca_24451_v3 Cicer arietinum L. HOM05D005876 ORTHO05D007326 1.4e-56 224.2 269 50.2
Os05g0472300 Oryza sativa ssp. japonica HOM05D005876 ORTHO05D007326 4.0e-56 222.6 307 42.7
HPP92_015422 Vanilla planifolia HOM05D005876 ORTHO05D007326 5.3e-56 222.2 298 42.6
C04p04270 Brassica napus HOM05D005876 ORTHO05D007326 1.5e-55 220.7 307 42.0
BolC4t22063H Brassica oleracea HOM05D005876 ORTHO05D007326 1.3e-54 217.6 307 41.7
Zm00001eb290190 Zea mays HOM05D005876 ORTHO05D007326 1.3e-54 217.6 301 42.5
Peaxi162Scf01604g00016 Petunia axillaris HOM05D005876 ORTHO05D007326 1.9e-53 213.8 266 45.9
Nitab4.5_0000669g0240 Nicotiana tabacum HOM05D005876 ORTHO05D007326 4.2e-53 212.6 330 42.1
ClCG10G020530 Citrullus lanatus HOM05D005876 ORTHO05D007326 5.5e-53 212.2 281 44.5
HPP92_026974 Vanilla planifolia HOM05D005876 ORTHO05D007326 1.6e-52 210.7 297 40.7
Duzib106G1607 Durio zibethinus HOM05D005876 ORTHO05D007326 2.7e-52 209.9 239 49.4
AUR62040047 Chenopodium quinoa HOM05D005876 ORTHO05D007326 5.1e-51 205.7 268 45.9
Medtr5g007880 Medicago truncatula HOM05D005876 ORTHO05D007326 5.1e-51 205.7 311 42.1
unitig_32.g11040 Utricularia gibba HOM05D005876 ORTHO05D007326 5.1e-51 205.7 294 44.9
PSO063G1014 Papaver somniferum HOM05D005876 ORTHO05D007326 3.3e-50 203.0 274 44.5
Nitab4.5_0002614g0010 Nicotiana tabacum HOM05D005876 ORTHO05D007326 2.0e-47 193.7 294 45.2
SEGI_25369 Sequoiadendron giganteum HOM05D005876 ORTHO05D007326 3.3e-42 176.4 222 41.0
Zm00001eb270830 Zea mays HOM05D005876 ORTHO05D007326 2.2e-41 173.7 302 38.1
PGR083G2396 Punica granatum HOM05D005876 ORTHO05D007326 1.1e-40 171.4 238 43.3
Ah.16g107680 Amaranthus hybridus HOM05D005876 ORTHO05D007326 1.4e-40 171.0 235 47.7
Glyma.01G229300 Glycine max HOM05D005876 ORTHO05D007326 2.0e-39 167.2 131 63.4
TAR636G2100 Trochodendron aralioides HOM05D005876 ORTHO05D007326 5.9e-39 165.6 131 58.0
Sc15g0002680 Simmondsia chinensis HOM05D005876 ORTHO05D007326 2.6e-34 150.2 190 48.9
Pp3c22_13580 Physcomitrium patens HOM05D005876 ORTHO05D007326 3.7e-33 146.4 232 41.4
SHI12568 Sapria himalayana HOM05D005876 ORTHO05D007326 8.2e-33 145.2 187 46.5
PGSC0003DMG400004235 Solanum tuberosum HOM05D005876 ORTHO05D007326 6.9e-32 142.1 273 37.0
Mapoly0065s0033 Marchantia polymorpha HOM05D005876 ORTHO05D007326 6.5e-30 135.6 300 32.3
Gorai.004G066200 Gossypium raimondii HOM05D005876 ORTHO05D007326 7.2e-29 132.1 105 59.0
AagrBONN_evm.TU.Sc2ySwM_117.3742 Anthoceros agrestis HOM05D005876 ORTHO05D007326 1.5e-26 124.4 258 29.8
TPR.G5312 Trifolium pratense HOM05D005876 ORTHO05D007326 2.2e-25 120.6 128 49.2
Psat4g011240 Pisum sativum HOM05D005876 ORTHO05D007326 1.1e-24 118.2 100 57.0
SMO302G0051 Selaginella moellendorffii HOM05D005876 ORTHO05D007326 8.5e-22 108.6 303 29.0
Oeu029421.1 Olea europaea HOM05D005876 ORTHO05D007326 1.1e-21 108.2 92 63.0
Dinv08367 Davidia involucrata HOM05D005876 ORTHO05D007326 6.7e-19 99.0 65 70.8
Dinv35712 Davidia involucrata HOM05D005876 ORTHO05D007326 6.7e-19 99.0 65 70.8
Zm00001eb286610 Zea mays HOM05D005876 ORTHO05D007326 9.7e-18 95.1 281 27.8
SMO353G0015 Selaginella moellendorffii HOM05D005876 ORTHO05D007326 4.1e-16 89.7 303 27.4
TPR.G5314 Trifolium pratense HOM05D000002 ORTHO05D000047 8.8e-11 72.0 64 50.0
Cfa025603 Carpinus fangiana HOM05D005876 ORTHO05D007326 1.8e-08 64.3 150 26.7
TAR636G2555 Trochodendron aralioides HOM05D005876 ORTHO05D007326 1.2e-07 61.6 119 37.8
CBR_g48398 Chara braunii HOM05D005876 ORTHO05D007326 5.9e-07 59.3 129 32.6


User provided reference genes

Program Settings