Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 0.0e+00 1372.1 686 100.0
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 0.0e+00 1104.4 686 80.5
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 0.0e+00 1099.3 687 79.9
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 1.3e-304 1049.3 687 77.4
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 1.1e-303 1046.2 688 76.6
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 1.9e-303 1045.4 689 76.8
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 6.9e-298 1026.9 690 75.8
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 2.0e-297 1025.4 693 74.9
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 5.0e-296 1020.8 690 75.5
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 9.4e-295 1016.5 690 75.5
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 1.6e-294 1015.8 690 75.2
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 3.6e-294 1014.6 690 74.5
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 6.1e-294 1013.8 691 75.7
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 1.3e-291 1006.1 689 75.3
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 4.1e-290 1001.1 698 73.4
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 1.0e-288 996.5 693 74.7
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 1.0e-288 996.5 689 73.7
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 1.3e-288 996.1 689 72.6
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 4.0e-285 984.6 647 75.0
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 8.8e-285 983.4 672 73.2
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 4.4e-284 981.1 695 72.2
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 6.3e-283 977.2 691 72.2
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 9.1e-282 973.4 693 71.0
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 8.5e-280 966.8 685 70.4
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 2.5e-279 965.3 693 69.7
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 2.5e-279 965.3 686 70.0
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 4.2e-279 964.5 688 72.1
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 7.2e-279 963.8 693 71.9
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 3.6e-278 961.4 698 71.6
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 6.1e-278 960.7 690 71.0
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 8.0e-278 960.3 645 72.9
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.4e-277 959.5 686 69.7
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 2.3e-277 958.7 686 72.4
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 5.2e-277 957.6 676 71.6
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 5.2e-277 957.6 708 69.8
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 8.8e-277 956.8 627 73.4
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 1.5e-276 956.1 690 71.3
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.0e-276 955.7 686 69.7
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 5.7e-276 954.1 682 70.8
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 5.7e-276 954.1 671 71.1
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 7.5e-276 953.7 691 70.8
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 9.8e-276 953.4 715 69.5
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 1.3e-275 953.0 699 71.0
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.8e-275 951.8 686 69.4
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 3.7e-275 951.4 686 69.1
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 6.3e-275 950.7 694 71.2
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 1.1e-274 949.9 691 70.2
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 9.1e-274 946.8 689 72.0
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 9.1e-274 946.8 673 71.2
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 3.8e-272 941.4 694 69.7
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 2.5e-271 938.7 692 70.8
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 3.6e-270 934.9 684 68.1
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 1.4e-269 932.9 690 68.8
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 1.4e-269 932.9 693 69.4
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 2.3e-269 932.2 671 69.9
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 3.0e-269 931.8 686 68.1
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 1.2e-268 929.9 689 69.5
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 6.3e-267 924.1 706 67.4
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 1.8e-266 922.5 689 68.9
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 9.2e-266 920.2 642 71.8
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 5.9e-265 917.5 565 80.0
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 5.9e-265 917.5 683 69.8
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 1.3e-264 916.4 699 68.1
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 6.6e-264 914.1 629 72.2
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 8.6e-264 913.7 689 68.2
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 1.5e-263 912.9 699 68.0
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 1.9e-263 912.5 695 67.9
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 2.5e-263 912.1 680 69.0
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 2.1e-262 909.1 590 73.2
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 8.0e-262 907.1 628 71.7
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 1.0e-261 906.7 680 68.2
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 1.0e-261 906.7 625 70.9
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 4.0e-261 904.8 626 71.1
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 6.8e-261 904.0 680 67.9
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 2.0e-260 902.5 679 67.7
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 2.6e-260 902.1 680 67.9
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 9.8e-260 900.2 679 67.6
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 2.9e-259 898.7 602 74.6
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 5.4e-258 894.4 677 64.8
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 1.6e-257 892.9 679 65.2
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 1.3e-256 889.8 665 68.6
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 3.3e-255 885.2 621 69.1
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 5.6e-255 884.4 563 78.2
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 1.6e-249 866.3 680 66.2
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 4.3e-247 858.2 681 65.2
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 1.5e-244 849.7 561 75.6
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 8.1e-238 827.4 812 56.7
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 1.2e-236 823.5 687 63.8
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 3.4e-236 822.0 808 56.2
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 5.8e-236 821.2 708 62.6
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 1.9e-234 816.2 561 71.7
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 2.8e-230 802.4 617 64.5
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 7.6e-220 767.7 693 60.6
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 6.0e-209 731.5 618 59.1
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 1.0e-203 714.1 474 76.6
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 1.0e-200 704.1 796 51.3
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 1.4e-194 683.7 439 75.9
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 1.4e-165 587.4 378 76.2
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 1.8e-149 533.9 455 59.3
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 1.2e-129 468.0 534 48.7
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 1.3e-118 431.4 562 44.5
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 1.0e-115 421.8 303 69.0
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 2.5e-114 417.2 349 62.2
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 5.8e-103 379.4 273 68.9
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 6.0e-92 342.8 335 55.8
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 6.0e-92 342.8 335 55.8
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 1.8e-88 331.3 556 37.2
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 1.5e-87 328.2 260 63.8
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 1.1e-77 295.4 235 65.1
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 4.1e-64 250.4 582 31.8
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 4.4e-58 230.3 255 47.5
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 1.3e-49 202.2 206 52.9
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 9.4e-45 186.0 146 65.8
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 8.8e-43 179.5 183 50.8
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 2.8e-36 157.9 147 56.5
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 2.0e-31 141.7 124 56.5
MCO14G318 Micromonas commoda HOM05D006589 ORTHO05D008350 2.6e-10 71.6 110 39.1
RcHm_v2.0_Chr1g0380361 Rosa chinensis HOM05D006589 ORTHO05D008350 3.2e-08 64.7 78 60.3
Cre07.g348500 Chlamydomonas reinhardtii HOM05D006589 ORTHO05D008350 7.1e-08 63.5 97 38.1


User provided reference genes

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