Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01835 Erythranthe guttata HOM05D003931 ORTHO05D004577 1.2e-143 513.1 251 100.0
Migut.H01834 Erythranthe guttata HOM05D003931 ORTHO05D004577 2.1e-114 416.0 252 78.6
unitig_749.g13966 Utricularia gibba HOM05D003931 ORTHO05D004577 1.2e-74 283.9 232 55.6
SGA_v2.0_scaffold9G05070 Striga asiatica HOM05D003931 ORTHO05D004577 1.6e-71 273.5 250 53.6
unitig_62.g23279 Utricularia gibba HOM05D003931 ORTHO05D004577 2.1e-66 256.5 230 53.5
MSTRG.6909 Avicennia marina HOM05D003931 ORTHO05D004577 7.9e-66 254.6 230 51.3
Migut.M01779 Erythranthe guttata HOM05D003931 ORTHO05D004577 1.1e-64 250.8 230 51.7
PGR083G2742 Punica granatum HOM05D003931 ORTHO05D004577 1.1e-64 250.8 233 49.4
CANSAT64G1454 Cannabis sativa HOM05D003931 ORTHO05D004577 2.5e-64 249.6 227 52.9
AUR62015742 Chenopodium quinoa HOM05D003931 ORTHO05D004577 1.6e-63 246.9 229 50.2
Dinv40740 Davidia involucrata HOM05D003931 ORTHO05D004577 1.6e-63 246.9 230 50.0
MELO3C025390.2 Cucumis melo HOM05D003931 ORTHO05D004577 2.8e-63 246.1 230 50.4
EL10Ac4g07844 Beta vulgaris HOM05D003931 ORTHO05D004577 4.8e-63 245.4 229 50.2
Haze_09657 Corylus avellana HOM05D003931 ORTHO05D004577 4.8e-63 245.4 224 51.3
Oeu062594.1 Olea europaea HOM05D003931 ORTHO05D004577 6.3e-63 245.0 234 52.1
SGA_v2.0_scaffold172G38997 Striga asiatica HOM05D003931 ORTHO05D004577 6.3e-63 245.0 227 52.4
ClCG10G005490 Citrullus lanatus HOM05D003931 ORTHO05D004577 8.2e-63 244.6 230 49.6
AUR62020469 Chenopodium quinoa HOM05D003931 ORTHO05D004577 1.1e-62 244.2 227 48.9
CsaV3_3G005230 Cucumis sativus L. HOM05D003931 ORTHO05D004577 1.1e-62 244.2 230 49.6
Ciclev10009005m.g Citrus clementina HOM05D003931 ORTHO05D004577 1.4e-62 243.8 225 52.0
QL08p011429 Quercus lobata HOM05D003931 ORTHO05D004577 1.8e-62 243.4 227 49.8
QL08p011634 Quercus lobata HOM05D003931 ORTHO05D004577 1.8e-62 243.4 227 49.8
QL08p011649 Quercus lobata HOM05D003931 ORTHO05D004577 1.8e-62 243.4 227 49.8
Ah.04g165790 Amaranthus hybridus HOM05D003931 ORTHO05D004577 2.4e-62 243.0 225 50.7
ATR0752G116 Amborella trichopoda HOM05D003931 ORTHO05D004577 2.4e-62 243.0 249 47.4
Lalb_Chr06g0171911 Lupinus albus HOM05D003931 ORTHO05D004577 2.4e-62 243.0 240 48.3
Nn1g03571 Nelumbo nucifera HOM05D003931 ORTHO05D004577 3.1e-62 242.7 230 50.0
Lsat_1_v5_gn_5_6120 Lactuca sativa HOM05D003931 ORTHO05D004577 5.3e-62 241.9 244 46.7
Cfa020372 Carpinus fangiana HOM05D003931 ORTHO05D004577 9.0e-62 241.1 224 50.0
FAN21G1679 Fragaria x ananassa HOM05D003931 ORTHO05D004577 2.0e-61 240.0 229 48.9
FAN21G3611 Fragaria x ananassa HOM05D003931 ORTHO05D004577 2.0e-61 240.0 229 48.9
Sed0028072 Sechium edule HOM05D003931 ORTHO05D004577 2.0e-61 240.0 227 48.5
Nitab4.5_0001604g0100 Nicotiana tabacum HOM05D003931 ORTHO05D004577 3.4e-61 239.2 240 46.7
Cc05_g13590 Coffea canephora HOM05D003931 ORTHO05D004577 5.9e-61 238.4 230 49.1
TWI38G0918 Tripterygium wilfordii HOM05D003931 ORTHO05D004577 5.9e-61 238.4 230 49.1
Eucgr.F00963 Eucalyptus grandis HOM05D003931 ORTHO05D004577 1.0e-60 237.7 227 47.6
Lsat_1_v5_gn_5_6180 Lactuca sativa HOM05D003931 ORTHO05D004577 1.0e-60 237.7 241 46.1
Atru.chr2.3378 Acer truncatum HOM05D003931 ORTHO05D004577 1.3e-60 237.3 229 49.8
FAN16G2486 Fragaria x ananassa HOM05D003931 ORTHO05D004577 1.7e-60 236.9 229 48.9
Manes.15G073200 Manihot esculenta HOM05D003931 ORTHO05D004577 1.7e-60 236.9 227 48.5
Oeu042929.1 Olea europaea HOM05D003931 ORTHO05D004577 1.7e-60 236.9 231 48.1
Solyc07g064410.1 Solanum lycopersicum HOM05D003931 ORTHO05D004577 1.7e-60 236.9 230 46.1
vmacro11735 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 1.7e-60 236.9 227 50.2
CiPaw.11G187800 Carya illinoinensis HOM05D003931 ORTHO05D004577 2.2e-60 236.5 230 47.8
Prupe.4G210600 Prunus persica HOM05D003931 ORTHO05D004577 2.2e-60 236.5 229 48.9
Hma1.2p1_1271F.1_g271720 Hydrangea macrophylla HOM05D003931 ORTHO05D004577 2.9e-60 236.1 228 47.8
Lj1C870G17 Lonicera japonica HOM05D003931 ORTHO05D004577 2.9e-60 236.1 225 48.0
THA.LOC104809192 Tarenaya hassleriana HOM05D003931 ORTHO05D004577 2.9e-60 236.1 230 48.3
Sopen07g032620 Solanum pennellii HOM05D003931 ORTHO05D004577 3.8e-60 235.7 230 46.5
FvH4_3g22400 Fragaria vesca HOM05D003931 ORTHO05D004577 5.0e-60 235.3 229 48.0
C01p23150 Brassica napus HOM05D003931 ORTHO05D004577 6.5e-60 235.0 230 49.1
Lalb_Chr02g0155621 Lupinus albus HOM05D003931 ORTHO05D004577 6.5e-60 235.0 229 48.0
arahy.Tifrunner.gnm1.ann1.07EMGU Arachis hypogaea HOM05D003931 ORTHO05D004577 8.5e-60 234.6 243 47.3
SGA_v2.0_scaffold9G05067 Striga asiatica HOM05D003931 ORTHO05D004577 8.5e-60 234.6 244 49.2
FAN11G2983 Fragaria x ananassa HOM05D003931 ORTHO05D004577 1.1e-59 234.2 229 48.0
MD03G1205300 Malus domestica HOM05D003931 ORTHO05D004577 1.4e-59 233.8 226 49.1
TAR626G0527 Trochodendron aralioides HOM05D003931 ORTHO05D004577 1.4e-59 233.8 231 47.6
Aqoxy1G03269 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 1.9e-59 233.4 246 46.3
Ca_14721_v3 Cicer arietinum L. HOM05D003931 ORTHO05D004577 2.5e-59 233.0 235 47.2
MD11G1221200 Malus domestica HOM05D003931 ORTHO05D004577 2.5e-59 233.0 229 48.9
RcHm_v2.0_Chr5g0039071 Rosa chinensis HOM05D003931 ORTHO05D004577 2.5e-59 233.0 229 48.5
Lj6g0018199 Lotus japonicus HOM05D003931 ORTHO05D004577 3.2e-59 232.6 227 48.0
TPR.G16574 Trifolium pratense HOM05D003931 ORTHO05D004577 3.2e-59 232.6 235 47.2
Glyma.18G099500 Glycine max HOM05D003931 ORTHO05D004577 5.5e-59 231.9 225 50.2
Sabra11G0123500 Salix brachista HOM05D003931 ORTHO05D004577 5.5e-59 231.9 230 47.4
BraA01t01774Z Brassica rapa HOM05D003931 ORTHO05D004577 7.2e-59 231.5 230 48.3
BcaC07g38267 Brassica carinata HOM05D003931 ORTHO05D004577 9.4e-59 231.1 230 49.1
C08p10140 Brassica napus HOM05D003931 ORTHO05D004577 9.4e-59 231.1 230 49.1
BolC1t02250H Brassica oleracea HOM05D003931 ORTHO05D004577 9.4e-59 231.1 230 48.7
BolC8t48692H Brassica oleracea HOM05D003931 ORTHO05D004577 9.4e-59 231.1 230 49.1
Duzib213G0550 Durio zibethinus HOM05D003931 ORTHO05D004577 9.4e-59 231.1 226 48.2
Sc03g0008680 Simmondsia chinensis HOM05D003931 ORTHO05D004577 1.6e-58 230.3 229 47.2
vmacro11734 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 1.6e-58 230.3 227 48.0
VMungo0540G1582 Vigna mungo HOM05D003931 ORTHO05D004577 1.6e-58 230.3 225 46.7
Medtr3g051220 Medicago truncatula HOM05D003931 ORTHO05D004577 2.1e-58 229.9 235 47.7
PGSC0003DMG400022225 Solanum tuberosum HOM05D003931 ORTHO05D004577 2.1e-58 229.9 247 43.7
BcaB03g12524 Brassica carinata HOM05D003931 ORTHO05D004577 2.7e-58 229.6 230 47.4
A08p20580 Brassica napus HOM05D003931 ORTHO05D004577 2.7e-58 229.6 230 47.4
PSO675G5012 Papaver somniferum HOM05D003931 ORTHO05D004577 2.7e-58 229.6 229 47.6
BraA08t34014Z Brassica rapa HOM05D003931 ORTHO05D004577 3.6e-58 229.2 230 47.0
Phvul.006G040800 Phaseolus vulgaris HOM05D003931 ORTHO05D004577 4.6e-58 228.8 225 48.4
A01p18190 Brassica napus HOM05D003931 ORTHO05D004577 6.1e-58 228.4 230 47.4
Sc03g0008690 Simmondsia chinensis HOM05D003931 ORTHO05D004577 6.1e-58 228.4 230 46.5
CAN.G337.115 Capsicum annuum HOM05D003931 ORTHO05D004577 7.9e-58 228.0 230 45.7
Peaxi162Scf00450g00075 Petunia axillaris HOM05D003931 ORTHO05D004577 7.9e-58 228.0 220 48.6
QL08p011463 Quercus lobata HOM05D003931 ORTHO05D004577 1.0e-57 227.6 235 46.0
CDE05G0277 Ceratophyllum demersum HOM05D003931 ORTHO05D007395 1.4e-57 227.3 230 46.5
Potri.001G424700 Populus trichocarpa HOM05D003931 ORTHO05D004577 1.8e-57 226.9 230 46.5
Thecc.07G042800 Theobroma cacao HOM05D003931 ORTHO05D004577 3.0e-57 226.1 230 47.4
Sp7g25010 Schrenkiella parvula HOM05D003931 ORTHO05D004577 5.1e-57 225.3 241 44.8
Psat5g180680 Pisum sativum HOM05D003931 ORTHO05D004577 8.8e-57 224.6 227 48.0
Sabra16G0288300 Salix brachista HOM05D003931 ORTHO05D004577 8.8e-57 224.6 226 47.8
AL7G25800 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 1.1e-56 224.2 229 46.7
Haze_23062 Corylus avellana HOM05D003931 ORTHO05D004577 1.1e-56 224.2 219 47.0
PSO541G1838 Papaver somniferum HOM05D003931 ORTHO05D004577 1.1e-56 224.2 229 46.7
Thhalv10027264m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 1.5e-56 223.8 230 46.1
Carub.0007s1381 Capsella rubella HOM05D003931 ORTHO05D004577 2.0e-56 223.4 230 46.1
Gorai.002G087700 Gossypium raimondii HOM05D003931 ORTHO05D004577 2.0e-56 223.4 230 47.0
HanXRQChr05g0159031 Helianthus annuus HOM05D003931 ORTHO05D004577 2.0e-56 223.4 250 43.6
Gohir.A01G078700 Gossypium hirsutum HOM05D003931 ORTHO05D004577 4.3e-56 222.2 230 47.0
Gohir.D01G065800 Gossypium hirsutum HOM05D003931 ORTHO05D004577 5.7e-56 221.9 230 46.5
Glyma.08G314700 Glycine max HOM05D003931 ORTHO05D004577 7.4e-56 221.5 225 47.6
CARHR234700 Cardamine hirsuta HOM05D003931 ORTHO05D004577 9.7e-56 221.1 228 45.6
Cfa009708 Carpinus fangiana HOM05D003931 ORTHO05D004577 2.8e-55 219.5 217 46.5
Actinidia09908 Actinidia chinensis HOM05D003931 ORTHO05D004577 3.7e-55 219.2 222 48.2
Sp7g24990 Schrenkiella parvula HOM05D003931 ORTHO05D004577 4.8e-55 218.8 247 41.3
Carub.0002s0286 Capsella rubella HOM05D003931 ORTHO05D004577 8.2e-55 218.0 237 43.9
Atru.chr2.3340 Acer truncatum HOM05D003931 ORTHO05D004577 1.4e-54 217.2 221 47.1
Atru.chr2.3337 Acer truncatum HOM05D003931 ORTHO05D004577 1.8e-54 216.9 219 47.5
PGSC0003DMG400004435 Solanum tuberosum HOM05D003931 ORTHO05D004577 1.8e-54 216.9 227 44.1
CARHR049940 Cardamine hirsuta HOM05D003931 ORTHO05D004577 5.3e-54 215.3 229 44.5
Rhsim06G0216100 Rhododendron simsii HOM05D003931 ORTHO05D004577 6.9e-54 214.9 189 51.9
Aa31LG5G10360 Aethionema arabicum HOM05D003931 ORTHO05D004577 9.1e-54 214.5 230 45.2
AT4G27030 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 9.1e-54 214.5 228 45.2
AUR62015741 Chenopodium quinoa HOM05D003931 ORTHO05D004577 9.1e-54 214.5 229 41.9
AT1G62190 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 1.5e-53 213.8 237 42.6
C07p55050 Brassica napus HOM05D003931 ORTHO05D004577 2.0e-53 213.4 247 40.5
BraA03t14771Z Brassica rapa HOM05D003931 ORTHO05D004577 2.0e-53 213.4 247 40.9
BcaC06g32716 Brassica carinata HOM05D003931 ORTHO05D004577 4.5e-53 212.2 244 41.0
DCAR_008677 Daucus carota HOM05D003931 ORTHO05D004577 5.9e-53 211.8 229 43.7
Nitab4.5_0004336g0020 Nicotiana tabacum HOM05D003931 ORTHO05D004577 5.9e-53 211.8 200 48.5
Thhalv10025879m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 7.7e-53 211.5 247 41.3
Migut.H01836 Erythranthe guttata HOM05D003931 ORTHO05D004577 1.0e-52 211.1 226 48.7
A03p57020 Brassica napus HOM05D003931 ORTHO05D004577 1.3e-52 210.7 247 40.9
Sc03g0008670 Simmondsia chinensis HOM05D003931 ORTHO05D004577 2.2e-52 209.9 219 44.7
Sp7g25000 Schrenkiella parvula HOM05D003931 ORTHO05D004577 3.8e-52 209.1 231 45.0
BolC7t46007H Brassica oleracea HOM05D003931 ORTHO05D004577 5.0e-52 208.8 247 39.7
Lj6g0018599 Lotus japonicus HOM05D003931 ORTHO05D004577 8.5e-52 208.0 230 44.8
Lsat_1_v5_gn_5_5140 Lactuca sativa HOM05D003931 ORTHO05D004577 1.1e-51 207.6 225 45.3
Thhalv10026787m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 1.4e-51 207.2 238 42.4
Zm00001eb413170 Zea mays HOM05D003931 ORTHO05D004577 2.1e-50 203.4 233 43.8
Aa31LG5G10380 Aethionema arabicum HOM05D003931 ORTHO05D004577 2.7e-50 203.0 227 43.2
AagrBONN_evm.TU.Sc2ySwM_368.1941 Anthoceros agrestis HOM05D003931 ORTHO05D004577 4.7e-50 202.2 227 44.9
CANSAT11G0562 Cannabis sativa HOM05D003931 ORTHO05D004577 4.7e-50 202.2 221 45.2
AL4G12480 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 2.3e-49 199.9 223 45.7
Aqoxy1G03270 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 3.9e-49 199.1 217 44.2
AT2G22890 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 3.9e-49 199.1 221 45.2
Prupe.4G210500 Prunus persica HOM05D003931 ORTHO05D004577 8.8e-49 198.0 214 46.7
CSS0050113 Camellia sinensis var. sinensis HOM05D003931 ORTHO05D004577 3.3e-48 196.1 189 49.7
Carub.0004s0202 Capsella rubella HOM05D003931 ORTHO05D004577 6.3e-47 191.8 220 44.1
SMO364G0503 Selaginella moellendorffii HOM05D003931 ORTHO05D004577 8.2e-47 191.4 227 45.4
Os08g0187900 Oryza sativa ssp. japonica HOM05D003931 ORTHO05D004577 1.6e-45 187.2 236 40.3
Zm00001eb413200 Zea mays HOM05D003931 ORTHO05D004577 2.0e-45 186.8 232 44.4
FAN11G0561 Fragaria x ananassa HOM05D003931 ORTHO05D004577 5.9e-45 185.3 219 44.3
CANSAT11G1176 Cannabis sativa HOM05D003931 ORTHO05D004577 7.7e-45 184.9 219 40.2
SEGI_34207 Sequoiadendron giganteum HOM05D003931 ORTHO05D004577 7.7e-45 184.9 228 40.8
BcaB03g12523 Brassica carinata HOM05D003931 ORTHO05D004577 1.0e-44 184.5 225 43.1
Mapoly0034s0071 Marchantia polymorpha HOM05D003931 ORTHO05D004577 2.2e-44 183.3 227 39.2
BraA08t34015Z Brassica rapa HOM05D003931 ORTHO05D004577 1.6e-42 177.2 225 42.2
Pp3c13_12570 Physcomitrium patens HOM05D003931 ORTHO05D004577 2.7e-42 176.4 246 37.0
BcaC07g38266 Brassica carinata HOM05D003931 ORTHO05D004577 3.6e-42 176.0 225 42.2
A08p20590 Brassica napus HOM05D003931 ORTHO05D004577 3.6e-42 176.0 236 40.3
C08p10100 Brassica napus HOM05D003931 ORTHO05D004577 3.6e-42 176.0 225 42.2
BolC8t48689H Brassica oleracea HOM05D003931 ORTHO05D004577 3.6e-42 176.0 225 42.2
BcaC07g38264 Brassica carinata HOM05D003931 ORTHO05D004577 1.0e-41 174.5 225 41.8
Cre16.g673001 Chlamydomonas reinhardtii HOM05D003931 ORTHO05D004577 1.4e-41 174.1 242 39.3
MCO05G373 Micromonas commoda HOM05D003931 ORTHO05D004577 4.0e-41 172.6 223 39.5
COL.COLO4_09644 Corchorus olitorius HOM05D003931 ORTHO05D004577 4.8e-39 165.6 230 38.3
QL09p032903 Quercus lobata HOM05D003931 ORTHO05D004577 1.8e-38 163.7 151 48.3
BolC8t48691H Brassica oleracea HOM05D003931 ORTHO05D004577 4.1e-38 162.5 186 44.6
ECA246G1165 Erigeron canadensis HOM05D003931 ORTHO05D004577 2.1e-34 150.2 149 46.3
Cpa.g.sc97.27 Carica papaya HOM05D003931 ORTHO05D004577 9.8e-32 141.4 163 44.8
Cfa009711 Carpinus fangiana HOM05D003931 ORTHO05D004577 9.8e-32 141.4 168 42.9
FvH4_3g22391 Fragaria vesca HOM05D003931 ORTHO05D004577 1.3e-31 141.0 187 36.4
COL.COLO4_07219 Corchorus olitorius HOM05D003931 ORTHO05D004577 3.1e-30 136.3 125 49.6
PRCOL_00003954 Prasinoderma coloniale HOM05D003931 ORTHO05D004577 4.1e-30 136.0 220 34.1
Eucgr.L01106 Eucalyptus grandis HOM05D003931 ORTHO05D004577 1.6e-29 134.0 210 35.7
CDE05G0281 Ceratophyllum demersum HOM05D003931 ORTHO05D004577 1.0e-28 131.3 153 43.1
CBR_g30523 Chara braunii HOM05D003931 ORTHO05D004577 3.6e-26 122.9 315 27.3
Haze_23061 Corylus avellana HOM05D003931 ORTHO05D004577 6.8e-25 118.6 123 44.7
AL3G48190 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 5.7e-24 115.5 100 49.0
COL.COLO4_07218 Corchorus olitorius HOM05D003931 ORTHO05D004577 3.5e-21 106.3 102 49.0
C08p10120 Brassica napus HOM05D003931 ORTHO05D004577 8.0e-18 95.1 95 47.4
C01p23190 Brassica napus HOM05D003931 ORTHO05D004577 6.4e-15 85.5 92 46.7
unitig_26.g9960 Utricularia gibba HOM05D003931 ORTHO05D004577 1.1e-14 84.7 82 50.0
unitig_26.g9959 Utricularia gibba HOM05D001404 ORTHO05D026306 3.7e-07 59.7 43 53.5
BcaC06g32715 Brassica carinata HOM05D003931 ORTHO05D004577 4.9e-07 59.3 49 42.9


User provided reference genes

Program Settings