Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01834 Erythranthe guttata HOM05D003931 ORTHO05D004577 2.8e-143 511.9 252 100.0
Migut.H01835 Erythranthe guttata HOM05D003931 ORTHO05D004577 2.3e-113 412.5 252 78.6
unitig_749.g13966 Utricularia gibba HOM05D003931 ORTHO05D004577 2.4e-78 296.2 234 59.8
SGA_v2.0_scaffold9G05070 Striga asiatica HOM05D003931 ORTHO05D004577 2.4e-70 269.6 249 54.2
ClCG10G005490 Citrullus lanatus HOM05D003931 ORTHO05D004577 9.4e-67 257.7 228 53.5
MSTRG.6909 Avicennia marina HOM05D003931 ORTHO05D004577 1.2e-66 257.3 226 54.0
PGR083G2742 Punica granatum HOM05D003931 ORTHO05D004577 2.7e-66 256.1 238 51.3
MELO3C025390.2 Cucumis melo HOM05D003931 ORTHO05D004577 3.6e-66 255.8 228 53.9
Ciclev10009005m.g Citrus clementina HOM05D003931 ORTHO05D004577 4.7e-66 255.4 226 55.8
QL08p011429 Quercus lobata HOM05D003931 ORTHO05D004577 6.1e-66 255.0 231 51.9
QL08p011634 Quercus lobata HOM05D003931 ORTHO05D004577 6.1e-66 255.0 231 51.9
QL08p011649 Quercus lobata HOM05D003931 ORTHO05D004577 6.1e-66 255.0 231 51.9
CANSAT64G1454 Cannabis sativa HOM05D003931 ORTHO05D004577 1.8e-65 253.4 228 54.8
CsaV3_3G005230 Cucumis sativus L. HOM05D003931 ORTHO05D004577 1.8e-65 253.4 228 52.2
Haze_09657 Corylus avellana HOM05D003931 ORTHO05D004577 2.3e-65 253.1 225 54.7
Migut.M01779 Erythranthe guttata HOM05D003931 ORTHO05D004577 3.9e-65 252.3 228 54.4
Cfa020372 Carpinus fangiana HOM05D003931 ORTHO05D004577 8.8e-65 251.1 225 53.8
Sed0028072 Sechium edule HOM05D003931 ORTHO05D004577 8.8e-65 251.1 228 52.2
Dinv40740 Davidia involucrata HOM05D003931 ORTHO05D004577 1.1e-64 250.8 228 52.6
AUR62015742 Chenopodium quinoa HOM05D003931 ORTHO05D004577 5.7e-64 248.4 228 51.3
THA.LOC104809192 Tarenaya hassleriana HOM05D003931 ORTHO05D004577 9.7e-64 247.7 228 53.1
ATR0752G116 Amborella trichopoda HOM05D003931 ORTHO05D004577 1.7e-63 246.9 247 50.2
CiPaw.11G187800 Carya illinoinensis HOM05D003931 ORTHO05D004577 1.7e-63 246.9 228 53.5
FAN16G2486 Fragaria x ananassa HOM05D003931 ORTHO05D004577 1.7e-63 246.9 227 53.3
Prupe.4G210600 Prunus persica HOM05D003931 ORTHO05D004577 1.7e-63 246.9 227 51.5
FAN21G1679 Fragaria x ananassa HOM05D003931 ORTHO05D004577 2.2e-63 246.5 227 52.9
FAN21G3611 Fragaria x ananassa HOM05D003931 ORTHO05D004577 2.2e-63 246.5 227 52.9
MD03G1205300 Malus domestica HOM05D003931 ORTHO05D004577 2.2e-63 246.5 230 50.9
MD11G1221200 Malus domestica HOM05D003931 ORTHO05D004577 2.2e-63 246.5 225 52.4
FvH4_3g22400 Fragaria vesca HOM05D003931 ORTHO05D004577 2.8e-63 246.1 225 52.9
unitig_62.g23279 Utricularia gibba HOM05D003931 ORTHO05D004577 2.8e-63 246.1 228 52.6
AUR62020469 Chenopodium quinoa HOM05D003931 ORTHO05D004577 3.7e-63 245.7 228 50.9
EL10Ac4g07844 Beta vulgaris HOM05D003931 ORTHO05D004577 4.8e-63 245.4 226 50.4
Lsat_1_v5_gn_5_6120 Lactuca sativa HOM05D003931 ORTHO05D004577 4.8e-63 245.4 229 52.4
Lalb_Chr06g0171911 Lupinus albus HOM05D003931 ORTHO05D004577 4.8e-63 245.4 226 50.9
Nn1g03571 Nelumbo nucifera HOM05D003931 ORTHO05D004577 4.8e-63 245.4 231 51.5
FAN11G2983 Fragaria x ananassa HOM05D003931 ORTHO05D004577 6.3e-63 245.0 227 52.4
Oeu062594.1 Olea europaea HOM05D003931 ORTHO05D004577 6.3e-63 245.0 239 53.1
Manes.15G073200 Manihot esculenta HOM05D003931 ORTHO05D004577 1.1e-62 244.2 228 51.8
Lj1C870G17 Lonicera japonica HOM05D003931 ORTHO05D004577 1.4e-62 243.8 226 51.3
TWI38G0918 Tripterygium wilfordii HOM05D003931 ORTHO05D004577 1.4e-62 243.8 228 51.3
Nitab4.5_0001604g0100 Nicotiana tabacum HOM05D003931 ORTHO05D004577 1.8e-62 243.4 228 52.2
Hma1.2p1_1271F.1_g271720 Hydrangea macrophylla HOM05D003931 ORTHO05D004577 2.4e-62 243.0 229 51.1
Atru.chr2.3378 Acer truncatum HOM05D003931 ORTHO05D004577 4.1e-62 242.3 227 52.4
Cc05_g13590 Coffea canephora HOM05D003931 ORTHO05D004577 4.1e-62 242.3 231 51.5
RcHm_v2.0_Chr5g0039071 Rosa chinensis HOM05D003931 ORTHO05D004577 4.1e-62 242.3 225 52.4
Gorai.002G087700 Gossypium raimondii HOM05D003931 ORTHO05D004577 7.0e-62 241.5 231 51.5
Eucgr.F00963 Eucalyptus grandis HOM05D003931 ORTHO05D004577 9.1e-62 241.1 228 49.6
Lsat_1_v5_gn_5_6180 Lactuca sativa HOM05D003931 ORTHO05D004577 9.1e-62 241.1 232 49.6
vmacro11734 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 9.1e-62 241.1 228 50.0
vmacro11735 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 9.1e-62 241.1 228 52.6
Ah.04g165790 Amaranthus hybridus HOM05D003931 ORTHO05D004577 1.2e-61 240.7 226 51.3
Duzib213G0550 Durio zibethinus HOM05D003931 ORTHO05D004577 1.2e-61 240.7 227 50.7
Gohir.D01G065800 Gossypium hirsutum HOM05D003931 ORTHO05D004577 2.0e-61 240.0 231 51.1
Aqoxy1G03269 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 3.5e-61 239.2 234 48.7
C01p23150 Brassica napus HOM05D003931 ORTHO05D004577 4.5e-61 238.8 231 51.9
Lalb_Chr02g0155621 Lupinus albus HOM05D003931 ORTHO05D004577 4.5e-61 238.8 225 50.2
SGA_v2.0_scaffold172G38997 Striga asiatica HOM05D003931 ORTHO05D004577 4.5e-61 238.8 239 50.6
Sc03g0008680 Simmondsia chinensis HOM05D003931 ORTHO05D004577 1.0e-60 237.7 226 50.9
BraA01t01774Z Brassica rapa HOM05D003931 ORTHO05D004577 1.3e-60 237.3 231 51.5
BraA08t34014Z Brassica rapa HOM05D003931 ORTHO05D004577 1.3e-60 237.3 231 51.5
BcaB03g12524 Brassica carinata HOM05D003931 ORTHO05D004577 1.7e-60 236.9 231 51.5
A08p20580 Brassica napus HOM05D003931 ORTHO05D004577 1.7e-60 236.9 231 51.1
Sc03g0008690 Simmondsia chinensis HOM05D003931 ORTHO05D004577 1.7e-60 236.9 228 49.1
Haze_23062 Corylus avellana HOM05D003931 ORTHO05D004577 2.2e-60 236.5 224 52.2
TAR626G0527 Trochodendron aralioides HOM05D003931 ORTHO05D004577 2.2e-60 236.5 229 49.8
Gohir.A01G078700 Gossypium hirsutum HOM05D003931 ORTHO05D004577 2.9e-60 236.1 231 50.6
AL7G25800 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 3.8e-60 235.7 227 52.0
Oeu042929.1 Olea europaea HOM05D003931 ORTHO05D004577 3.8e-60 235.7 229 51.5
PSO675G5012 Papaver somniferum HOM05D003931 ORTHO05D004577 3.8e-60 235.7 228 50.0
Carub.0007s1381 Capsella rubella HOM05D003931 ORTHO05D004577 5.0e-60 235.3 228 51.8
Ca_14721_v3 Cicer arietinum L. HOM05D003931 ORTHO05D004577 5.0e-60 235.3 233 50.2
Lj6g0018199 Lotus japonicus HOM05D003931 ORTHO05D004577 5.0e-60 235.3 228 49.6
BolC1t02250H Brassica oleracea HOM05D003931 ORTHO05D004577 6.5e-60 235.0 231 51.5
Glyma.08G314700 Glycine max HOM05D003931 ORTHO05D004577 8.5e-60 234.6 231 49.8
Sabra11G0123500 Salix brachista HOM05D003931 ORTHO05D004577 8.5e-60 234.6 226 51.8
Thecc.07G042800 Theobroma cacao HOM05D003931 ORTHO05D004577 8.5e-60 234.6 231 49.8
A01p18190 Brassica napus HOM05D003931 ORTHO05D004577 1.1e-59 234.2 231 50.6
VMungo0540G1582 Vigna mungo HOM05D003931 ORTHO05D004577 1.4e-59 233.8 231 48.1
Psat5g180680 Pisum sativum HOM05D003931 ORTHO05D004577 1.9e-59 233.4 245 46.9
Medtr3g051220 Medicago truncatula HOM05D003931 ORTHO05D004577 2.5e-59 233.0 237 48.1
QL08p011463 Quercus lobata HOM05D003931 ORTHO05D004577 2.5e-59 233.0 234 47.9
arahy.Tifrunner.gnm1.ann1.07EMGU Arachis hypogaea HOM05D003931 ORTHO05D004577 3.2e-59 232.6 231 49.4
BcaC07g38267 Brassica carinata HOM05D003931 ORTHO05D004577 3.2e-59 232.6 231 50.2
C08p10140 Brassica napus HOM05D003931 ORTHO05D004577 3.2e-59 232.6 231 50.2
BolC8t48692H Brassica oleracea HOM05D003931 ORTHO05D004577 3.2e-59 232.6 231 50.2
Thhalv10027264m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 3.2e-59 232.6 228 50.4
Glyma.18G099500 Glycine max HOM05D003931 ORTHO05D004577 3.2e-59 232.6 231 49.8
TPR.G16574 Trifolium pratense HOM05D003931 ORTHO05D004577 3.2e-59 232.6 237 46.8
PSO541G1838 Papaver somniferum HOM05D003931 ORTHO05D004577 4.2e-59 232.3 228 49.1
Sopen07g032620 Solanum pennellii HOM05D003931 ORTHO05D004577 4.2e-59 232.3 226 49.1
SGA_v2.0_scaffold9G05067 Striga asiatica HOM05D003931 ORTHO05D004577 4.2e-59 232.3 244 48.8
Phvul.006G040800 Phaseolus vulgaris HOM05D003931 ORTHO05D004577 5.5e-59 231.9 231 48.5
Potri.001G424700 Populus trichocarpa HOM05D003931 ORTHO05D004577 5.5e-59 231.9 228 49.1
Solyc07g064410.1 Solanum lycopersicum HOM05D003931 ORTHO05D004577 5.5e-59 231.9 226 49.1
HanXRQChr05g0159031 Helianthus annuus HOM05D003931 ORTHO05D004577 9.4e-59 231.1 241 48.5
Peaxi162Scf00450g00075 Petunia axillaris HOM05D003931 ORTHO05D004577 1.6e-58 230.3 216 53.2
Sp7g25010 Schrenkiella parvula HOM05D003931 ORTHO05D004577 1.6e-58 230.3 228 50.4
PGSC0003DMG400022225 Solanum tuberosum HOM05D003931 ORTHO05D004577 1.6e-58 230.3 226 49.6
Cfa009708 Carpinus fangiana HOM05D003931 ORTHO05D004577 2.1e-58 229.9 218 50.5
CARHR234700 Cardamine hirsuta HOM05D003931 ORTHO05D004577 2.7e-58 229.6 226 50.4
CAN.G337.115 Capsicum annuum HOM05D003931 ORTHO05D004577 4.7e-58 228.8 226 48.2
CDE05G0277 Ceratophyllum demersum HOM05D003931 ORTHO05D007395 4.7e-58 228.8 231 47.6
Actinidia09908 Actinidia chinensis HOM05D003931 ORTHO05D004577 1.0e-57 227.6 220 51.8
AT4G27030 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 1.0e-57 227.6 224 52.2
Sabra16G0288300 Salix brachista HOM05D003931 ORTHO05D004577 1.4e-57 227.3 227 48.9
Rhsim06G0216100 Rhododendron simsii HOM05D003931 ORTHO05D004577 1.8e-57 226.9 189 56.6
Atru.chr2.3337 Acer truncatum HOM05D003931 ORTHO05D004577 3.0e-57 226.1 222 50.0
Aa31LG5G10360 Aethionema arabicum HOM05D003931 ORTHO05D004577 1.5e-56 223.8 228 50.0
DCAR_008677 Daucus carota HOM05D003931 ORTHO05D004577 2.0e-56 223.4 230 46.1
Atru.chr2.3340 Acer truncatum HOM05D003931 ORTHO05D004577 2.2e-55 219.9 220 49.5
Sp7g24990 Schrenkiella parvula HOM05D003931 ORTHO05D004577 3.7e-55 219.2 232 45.7
PGSC0003DMG400004435 Solanum tuberosum HOM05D003931 ORTHO05D004577 2.4e-54 216.5 231 46.8
Carub.0002s0286 Capsella rubella HOM05D003931 ORTHO05D004577 7.0e-54 214.9 228 45.6
AUR62015741 Chenopodium quinoa HOM05D003931 ORTHO05D004577 7.0e-54 214.9 224 44.2
BcaC06g32716 Brassica carinata HOM05D003931 ORTHO05D004577 2.6e-53 213.0 229 46.3
C07p55050 Brassica napus HOM05D003931 ORTHO05D004577 2.6e-53 213.0 245 43.3
AT1G62190 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 5.9e-53 211.8 228 45.6
Zm00001eb413170 Zea mays HOM05D003931 ORTHO05D004577 5.9e-53 211.8 232 47.4
CARHR049940 Cardamine hirsuta HOM05D003931 ORTHO05D004577 7.7e-53 211.5 227 46.7
Thhalv10025879m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 2.2e-52 209.9 245 42.9
A03p57020 Brassica napus HOM05D003931 ORTHO05D004577 3.8e-52 209.1 245 43.3
BolC7t46007H Brassica oleracea HOM05D003931 ORTHO05D004577 3.8e-52 209.1 245 42.4
BraA03t14771Z Brassica rapa HOM05D003931 ORTHO05D004577 3.8e-52 209.1 229 45.4
Nitab4.5_0004336g0020 Nicotiana tabacum HOM05D003931 ORTHO05D004577 5.0e-52 208.8 199 52.3
Aa31LG5G10380 Aethionema arabicum HOM05D003931 ORTHO05D004577 8.5e-52 208.0 228 46.1
Lsat_1_v5_gn_5_5140 Lactuca sativa HOM05D003931 ORTHO05D004577 1.9e-51 206.8 226 46.5
AT2G22890 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 2.5e-51 206.5 223 47.5
Thhalv10026787m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 2.5e-51 206.5 226 46.9
Migut.H01836 Erythranthe guttata HOM05D003931 ORTHO05D004577 3.2e-51 206.1 227 48.5
Sp7g25000 Schrenkiella parvula HOM05D003931 ORTHO05D004577 3.2e-51 206.1 232 47.0
Sc03g0008670 Simmondsia chinensis HOM05D003931 ORTHO05D004577 4.2e-51 205.7 220 44.5
Os08g0187900 Oryza sativa ssp. japonica HOM05D003931 ORTHO05D004577 9.4e-51 204.5 237 44.7
AL4G12480 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 1.2e-50 204.1 224 46.9
Lj6g0018599 Lotus japonicus HOM05D003931 ORTHO05D004577 3.6e-50 202.6 224 46.4
CSS0050113 Camellia sinensis var. sinensis HOM05D003931 ORTHO05D004577 1.4e-49 200.7 192 50.0
Aqoxy1G03270 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 1.8e-49 200.3 229 45.4
CANSAT11G0562 Cannabis sativa HOM05D003931 ORTHO05D004577 3.0e-49 199.5 222 45.0
Prupe.4G210500 Prunus persica HOM05D003931 ORTHO05D004577 3.0e-49 199.5 212 46.7
Carub.0004s0202 Capsella rubella HOM05D003931 ORTHO05D004577 5.2e-49 198.7 221 47.1
Zm00001eb413200 Zea mays HOM05D003931 ORTHO05D004577 1.2e-48 197.6 228 45.6
CANSAT11G1176 Cannabis sativa HOM05D003931 ORTHO05D004577 2.0e-48 196.8 219 43.8
SMO364G0503 Selaginella moellendorffii HOM05D003931 ORTHO05D004577 2.6e-48 196.4 228 45.2
AagrBONN_evm.TU.Sc2ySwM_368.1941 Anthoceros agrestis HOM05D003931 ORTHO05D004577 3.7e-47 192.6 228 43.4
SEGI_34207 Sequoiadendron giganteum HOM05D003931 ORTHO05D004577 1.8e-46 190.3 229 42.4
Mapoly0034s0071 Marchantia polymorpha HOM05D003931 ORTHO05D004577 4.1e-46 189.1 228 41.2
BcaB03g12523 Brassica carinata HOM05D003931 ORTHO05D004577 2.0e-45 186.8 226 45.1
Pp3c13_12570 Physcomitrium patens HOM05D003931 ORTHO05D004577 1.7e-44 183.7 247 39.3
FAN11G0561 Fragaria x ananassa HOM05D003931 ORTHO05D004577 3.8e-44 182.6 220 42.7
BraA08t34015Z Brassica rapa HOM05D003931 ORTHO05D004577 2.1e-42 176.8 226 44.2
BcaC07g38266 Brassica carinata HOM05D003931 ORTHO05D004577 4.7e-42 175.6 226 44.2
C08p10100 Brassica napus HOM05D003931 ORTHO05D004577 4.7e-42 175.6 226 44.2
BolC8t48689H Brassica oleracea HOM05D003931 ORTHO05D004577 4.7e-42 175.6 226 44.2
A08p20590 Brassica napus HOM05D003931 ORTHO05D004577 8.0e-42 174.9 226 43.8
BcaC07g38264 Brassica carinata HOM05D003931 ORTHO05D004577 1.4e-41 174.1 226 43.8
COL.COLO4_09644 Corchorus olitorius HOM05D003931 ORTHO05D004577 2.3e-41 173.3 231 41.1
MCO05G373 Micromonas commoda HOM05D003931 ORTHO05D004577 4.0e-41 172.6 211 42.2
BolC8t48691H Brassica oleracea HOM05D003931 ORTHO05D004577 7.5e-40 168.3 186 47.8
QL09p032903 Quercus lobata HOM05D003931 ORTHO05D004577 7.5e-40 168.3 151 52.3
Cre16.g673001 Chlamydomonas reinhardtii HOM05D003931 ORTHO05D004577 1.3e-39 167.5 241 38.2
ECA246G1165 Erigeron canadensis HOM05D003931 ORTHO05D004577 5.4e-38 162.2 149 50.3
FvH4_3g22391 Fragaria vesca HOM05D003931 ORTHO05D004577 1.1e-35 154.5 184 40.2
Cfa009711 Carpinus fangiana HOM05D003931 ORTHO05D004577 2.1e-34 150.2 169 49.7
Cpa.g.sc97.27 Carica papaya HOM05D003931 ORTHO05D004577 3.0e-33 146.4 164 48.2
COL.COLO4_07219 Corchorus olitorius HOM05D003931 ORTHO05D004577 4.4e-32 142.5 130 51.5
PRCOL_00003954 Prasinoderma coloniale HOM05D003931 ORTHO05D004577 2.8e-31 139.8 221 35.3
Eucgr.L01106 Eucalyptus grandis HOM05D003931 ORTHO05D004577 1.8e-30 137.1 211 37.9
CDE05G0281 Ceratophyllum demersum HOM05D003931 ORTHO05D004577 3.5e-29 132.9 154 46.1
CBR_g30523 Chara braunii HOM05D003931 ORTHO05D004577 1.2e-26 124.4 314 28.3
Haze_23061 Corylus avellana HOM05D003931 ORTHO05D004577 6.1e-26 122.1 130 49.2
AL3G48190 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 8.0e-26 121.7 101 50.5
COL.COLO4_07218 Corchorus olitorius HOM05D003931 ORTHO05D004577 4.4e-24 115.9 108 51.9
C08p10120 Brassica napus HOM05D003931 ORTHO05D004577 9.5e-19 98.2 96 47.9
unitig_26.g9960 Utricularia gibba HOM05D003931 ORTHO05D004577 1.4e-14 84.3 81 50.6
C01p23190 Brassica napus HOM05D003931 ORTHO05D004577 3.5e-13 79.7 93 47.3
BcaC06g32715 Brassica carinata HOM05D003931 ORTHO05D004577 6.2e-10 68.9 49 53.1
unitig_26.g9959 Utricularia gibba HOM05D001404 ORTHO05D026306 7.6e-08 62.0 43 53.5


User provided reference genes

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