Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00565 Erythranthe guttata HOM05D005338 ORTHO05D006550 7.2e-116 420.6 218 100.0
SGA_v2.0_scaffold4G02341 Striga asiatica HOM05D005338 ORTHO05D006550 6.6e-109 397.5 218 92.7
MSTRG.2958 Avicennia marina HOM05D005338 ORTHO05D006550 5.6e-108 394.4 218 92.7
Nitab4.5_0003384g0030 Nicotiana tabacum HOM05D005338 ORTHO05D006550 3.0e-106 388.7 218 89.9
SalBow1G1006 Salvia bowleyana HOM05D000168 ORTHO05D006550 1.5e-105 386.3 218 90.4
Nitab4.5_0000154g0040 Nicotiana tabacum HOM05D005338 ORTHO05D006550 3.4e-105 385.2 217 89.4
Cfa002226 Carpinus fangiana HOM05D005338 ORTHO05D006550 5.7e-105 384.4 218 88.5
Cc07_g04760 Coffea canephora HOM05D005338 ORTHO05D006550 5.7e-105 384.4 218 89.4
CiPaw.15G069200 Carya illinoinensis HOM05D005338 ORTHO05D006550 1.7e-104 382.9 218 88.1
CAN.G162.113 Capsicum annuum HOM05D005338 ORTHO05D006550 2.2e-104 382.5 215 89.3
Cfa018461 Carpinus fangiana HOM05D005338 ORTHO05D006550 8.3e-104 380.6 215 88.4
CSS0015965 Camellia sinensis var. sinensis HOM05D005338 ORTHO05D006550 1.1e-103 380.2 218 87.6
Actinidia15288 Actinidia chinensis HOM05D005338 ORTHO05D006550 1.4e-103 379.8 218 88.1
Cpa.g.sc337.5 Carica papaya HOM05D005338 ORTHO05D006550 9.2e-103 377.1 218 87.2
Solyc06g008010.3 Solanum lycopersicum HOM05D005338 ORTHO05D006550 1.2e-102 376.7 215 87.9
PGSC0003DMG400014704 Solanum tuberosum HOM05D005338 ORTHO05D006550 1.2e-102 376.7 215 87.9
Sopen06g002850 Solanum pennellii HOM05D005338 ORTHO05D006550 2.7e-102 375.6 215 87.4
TWI74G1059 Tripterygium wilfordii HOM05D005338 ORTHO05D006550 5.9e-102 374.4 218 87.6
GSVIVG01009622001 Vitis vinifera HOM05D005338 ORTHO05D006550 1.0e-101 373.6 215 87.4
QL02p007082 Quercus lobata HOM05D005338 ORTHO05D006550 1.3e-101 373.2 217 86.2
Oeu012884.1 Olea europaea HOM05D005338 ORTHO05D006550 1.7e-101 372.9 218 86.2
Medtr2g438770 Medicago truncatula HOM05D005338 ORTHO05D006550 3.9e-101 371.7 218 86.7
Hma1.2p1_0471F.1_g159310 Hydrangea macrophylla HOM05D005338 ORTHO05D006550 8.6e-101 370.5 218 87.2
Glyma.15G160500 Glycine max HOM05D005338 ORTHO05D006550 1.1e-100 370.2 218 84.4
Duzib147G0908 Durio zibethinus HOM05D005338 ORTHO05D006550 1.5e-100 369.8 218 85.8
Glyma.09G054300 Glycine max HOM05D005338 ORTHO05D006550 3.3e-100 368.6 218 84.4
VMungo1215G3044 Vigna mungo HOM05D005338 ORTHO05D006550 4.3e-100 368.2 218 84.9
Ciclev10026443m.g Citrus clementina HOM05D005338 ORTHO05D006550 5.6e-100 367.9 211 87.7
Gorai.007G236400 Gossypium raimondii HOM05D005338 ORTHO05D006550 5.6e-100 367.9 211 88.2
ClCG08G015430 Citrullus lanatus HOM05D005338 ORTHO05D006550 7.3e-100 367.5 218 83.5
CsaV3_2G028360 Cucumis sativus L. HOM05D005338 ORTHO05D006550 7.3e-100 367.5 218 83.5
Gohir.A11G203500 Gossypium hirsutum HOM05D005338 ORTHO05D006550 1.6e-99 366.3 218 85.8
Gorai.003G040400 Gossypium raimondii HOM05D005338 ORTHO05D006550 3.6e-99 365.2 218 84.9
PGR083G0298 Punica granatum HOM05D005338 ORTHO05D006550 3.6e-99 365.2 218 84.4
MBI01_g22964_MAGBIO Magnolia biondii HOM05D005338 ORTHO05D006550 4.7e-99 364.8 218 83.9
Gohir.D03G039200 Gossypium hirsutum HOM05D005338 ORTHO05D006550 8.0e-99 364.0 218 84.9
Gohir.A02G128500 Gossypium hirsutum HOM05D005338 ORTHO05D006550 1.4e-98 363.2 218 84.4
Sed0010775 Sechium edule HOM05D005338 ORTHO05D006550 1.4e-98 363.2 218 82.1
COL.COLO4_27273 Corchorus olitorius HOM05D005338 ORTHO05D006550 1.8e-98 362.8 218 85.3
Nn8g40744 Nelumbo nucifera HOM05D005338 ORTHO05D006550 2.3e-98 362.5 218 84.4
CANSAT25G1955 Cannabis sativa HOM05D005338 ORTHO05D006550 3.1e-98 362.1 218 83.9
Peaxi162Scf00479g00910 Petunia axillaris HOM05D005338 ORTHO05D006550 5.2e-98 361.3 206 89.3
Thecc.01G098200 Theobroma cacao HOM05D005338 ORTHO05D006550 5.2e-98 361.3 218 83.9
unitig_744.g23988 Utricularia gibba HOM05D005338 ORTHO05D006550 6.8e-98 360.9 215 86.5
Manes.13G095300 Manihot esculenta HOM05D005338 ORTHO05D006550 8.9e-98 360.5 220 85.0
EL10Ac3g06218 Beta vulgaris HOM05D005338 ORTHO05D006550 1.5e-97 359.8 218 82.6
CARHR113580 Cardamine hirsuta HOM05D005338 ORTHO05D006550 2.0e-97 359.4 218 83.0
VMungo1309G1758 Vigna mungo HOM05D005338 ORTHO05D006550 2.6e-97 359.0 218 82.1
Lj4g0021487 Lotus japonicus HOM05D005338 ORTHO05D006550 3.4e-97 358.6 218 81.7
Phvul.009G240644 Phaseolus vulgaris HOM05D005338 ORTHO05D006550 3.4e-97 358.6 218 82.6
Prupe.1G518900 Prunus persica HOM05D005338 ORTHO05D006550 5.8e-97 357.8 217 82.9
arahy.Tifrunner.gnm1.ann1.82M2ZV Arachis hypogaea HOM05D005338 ORTHO05D006550 7.5e-97 357.5 218 81.7
arahy.Tifrunner.gnm1.ann1.F09FAE Arachis hypogaea HOM05D005338 ORTHO05D006550 7.5e-97 357.5 218 81.7
arahy.Tifrunner.gnm1.ann1.N4382H Arachis hypogaea HOM05D005338 ORTHO05D006550 7.5e-97 357.5 218 81.7
arahy.Tifrunner.gnm1.ann1.VZ94AI Arachis hypogaea HOM05D005338 ORTHO05D006550 7.5e-97 357.5 218 81.7
DCAR_003287 Daucus carota HOM05D005338 ORTHO05D006550 7.5e-97 357.5 218 83.0
Eucgr.F01508 Eucalyptus grandis HOM05D005338 ORTHO05D006550 7.5e-97 357.5 218 82.1
THA.LOC104824882 Tarenaya hassleriana HOM05D005338 ORTHO05D006550 7.5e-97 357.5 218 83.0
Prupe.1G517500 Prunus persica HOM05D005338 ORTHO05D006550 9.8e-97 357.1 217 82.9
Glyma.18G135700 Glycine max HOM05D005338 ORTHO05D006550 1.3e-96 356.7 218 82.1
CANSAT56G3114 Cannabis sativa HOM05D005338 ORTHO05D006550 1.7e-96 356.3 218 82.1
vmacro21598 Vaccinium macrocarpon HOM05D005338 ORTHO05D006550 1.7e-96 356.3 207 87.0
Lalb_Chr15g0083931 Lupinus albus HOM05D005338 ORTHO05D006550 2.9e-96 355.5 211 82.9
Psat1g148520 Pisum sativum HOM05D005338 ORTHO05D006550 3.7e-96 355.1 223 80.7
AT2G22370 Arabidopsis thaliana HOM05D005338 ORTHO05D006550 6.4e-96 354.4 218 81.2
Hund12454 Selenicereus undatus HOM05D005338 ORTHO05D006550 2.4e-95 352.4 207 85.5
FAN04G2403 Fragaria x ananassa HOM05D005338 ORTHO05D006550 3.2e-95 352.1 214 83.2
FvH4_5g37300 Fragaria vesca HOM05D005338 ORTHO05D006550 4.1e-95 351.7 217 82.0
TPR.G29215 Trifolium pratense HOM05D005338 ORTHO05D006550 4.1e-95 351.7 207 86.5
RcHm_v2.0_Chr5g0038311 Rosa chinensis HOM05D005338 ORTHO05D006550 5.4e-95 351.3 218 81.7
FAN08G1597 Fragaria x ananassa HOM05D005338 ORTHO05D006550 1.2e-94 350.1 217 81.6
Haze_25403 Corylus avellana HOM05D005338 ORTHO05D006550 2.0e-94 349.4 294 66.3
Medtr5g044730 Medicago truncatula HOM05D005338 ORTHO05D006550 4.6e-94 348.2 207 85.5
ECA247G2066 Erigeron canadensis HOM05D005338 ORTHO05D006550 1.0e-93 347.1 220 81.8
Thhalv10000318m.g Eutrema salsugineum HOM05D005338 ORTHO05D006550 1.3e-93 346.7 218 79.8
Potri.007G095300 Populus trichocarpa HOM05D005338 ORTHO05D006550 3.0e-93 345.5 218 82.6
AL4G11870 Arabidopsis lyrata HOM05D005338 ORTHO05D006550 3.9e-93 345.1 218 79.4
Gohir.D11G220100 Gossypium hirsutum HOM05D005338 ORTHO05D006550 1.5e-92 343.2 209 83.7
HanXRQChr04g0104391 Helianthus annuus HOM05D005338 ORTHO05D006550 1.5e-92 343.2 221 80.5
Lsat_1_v5_gn_1_19481 Lactuca sativa HOM05D005338 ORTHO05D006550 2.5e-92 342.4 206 85.4
PSO017G6030 Papaver somniferum HOM05D005338 ORTHO05D006550 2.5e-92 342.4 218 78.9
BcaC02g08711 Brassica carinata HOM05D005338 ORTHO05D006550 7.3e-92 340.9 219 79.9
C04p51430 Brassica napus HOM05D005338 ORTHO05D006550 7.3e-92 340.9 219 79.9
BcaC02g08666 Brassica carinata HOM05D005338 ORTHO05D006550 1.2e-91 340.1 219 79.0
A04p16850 Brassica napus HOM05D005338 ORTHO05D006550 2.1e-91 339.3 219 79.0
BraA04t17318Z Brassica rapa HOM05D005338 ORTHO05D006550 2.1e-91 339.3 219 79.0
Carub.0004s0155 Capsella rubella HOM05D005338 ORTHO05D006550 2.1e-91 339.3 218 77.5
Aqoxy6G01960 Aquilegia oxysepala HOM05D005338 ORTHO05D006550 3.6e-91 338.6 218 78.4
PSO170G4003 Papaver somniferum HOM05D005338 ORTHO05D006550 3.6e-91 338.6 218 78.4
BolC4t26735H Brassica oleracea HOM05D005338 ORTHO05D006550 6.2e-91 337.8 219 79.5
FAN13G0739 Fragaria x ananassa HOM05D005338 ORTHO05D006550 2.3e-90 335.9 203 82.3
FAN18G4080 Fragaria x ananassa HOM05D005338 ORTHO05D006550 2.3e-90 335.9 202 83.2
Sopen03g010490 Solanum pennellii HOM05D005338 ORTHO05D006550 3.1e-90 335.5 215 79.1
Sopen03g021660 Solanum pennellii HOM05D005338 ORTHO05D006550 8.9e-90 334.0 215 78.6
Aqoxy1G02678 Aquilegia oxysepala HOM05D005338 ORTHO05D006550 1.2e-89 333.6 218 77.1
Sabra07G0078500 Salix brachista HOM05D005338 ORTHO05D006550 3.4e-89 332.0 211 80.6
MD15G1369800 Malus domestica HOM05D005338 ORTHO05D006550 4.4e-89 331.6 221 76.5
Sopen03g021630 Solanum pennellii HOM05D005338 ORTHO05D006550 5.8e-89 331.3 215 78.1
ATR0767G114 Amborella trichopoda HOM05D005338 ORTHO05D006550 7.5e-89 330.9 218 77.1
Dinv36026 Davidia involucrata HOM05D005338 ORTHO05D006550 2.4e-87 325.9 215 79.5
HPP92_021909 Vanilla planifolia HOM05D005338 ORTHO05D006550 1.0e-85 320.5 211 73.0
CDE07G0352 Ceratophyllum demersum HOM05D005338 ORTHO05D006550 5.1e-85 318.2 196 81.1
Zm00001eb236490 Zea mays HOM05D005338 ORTHO05D006550 1.5e-84 316.6 202 75.2
Sp4g01410 Schrenkiella parvula HOM05D005338 ORTHO05D006550 2.5e-84 315.8 218 73.4
Os02g0193900 Oryza sativa ssp. japonica HOM05D005338 ORTHO05D006550 4.3e-84 315.1 203 74.4
CAN.G176.23 Capsicum annuum HOM05D005338 ORTHO05D006550 3.1e-82 308.9 185 83.8
Aa31LG7G14440 Aethionema arabicum HOM05D005338 ORTHO05D006550 4.0e-82 308.5 277 58.5
Rhsim06G0038600 Rhododendron simsii HOM05D005338 ORTHO05D006550 2.1e-78 296.2 185 82.7
MELO3C010912.2 Cucumis melo HOM05D005338 ORTHO05D006550 2.3e-77 292.7 174 83.3
Ca_02026_v3 Cicer arietinum L. HOM05D005338 ORTHO05D006550 1.6e-75 286.6 164 84.1
SHI19279 Sapria himalayana HOM05D005338 ORTHO05D006550 4.7e-75 285.0 201 72.1
Lj4A782T79 Lonicera japonica HOM05D005338 ORTHO05D006550 2.4e-74 282.7 173 81.5
Pp3c14_750 Physcomitrium patens HOM05D005338 ORTHO05D006550 5.2e-74 281.6 219 61.2
Mapoly0023s0045 Marchantia polymorpha HOM05D005338 ORTHO05D006550 2.9e-72 275.8 210 66.2
SalBow1G1231 Salvia bowleyana HOM05D005338 ORTHO05D006550 2.3e-69 266.2 218 69.3
SMO236G0045 Selaginella moellendorffii HOM05D005338 ORTHO05D006550 1.9e-68 263.1 210 61.4
AagrBONN_evm.TU.Sc2ySwM_362.1720 Anthoceros agrestis HOM05D005338 ORTHO05D006550 7.9e-62 241.1 210 59.0
Solyc03g046360.3 Solanum lycopersicum HOM05D005338 ORTHO05D006550 2.3e-61 239.6 212 62.3
AUR62040070 Chenopodium quinoa HOM05D005338 ORTHO05D006550 1.5e-60 236.9 139 82.7
TAR628G0003 Trochodendron aralioides HOM05D005338 ORTHO05D006550 2.5e-60 236.1 145 84.1
Sc15g0006680 Simmondsia chinensis HOM05D005338 ORTHO05D006550 6.2e-59 231.5 145 83.4
RcHm_v2.0_Chr7g0238911 Rosa chinensis HOM05D005338 ORTHO05D006550 7.1e-55 218.0 176 68.2
Hma1.2p1_0023F.1_g015170 Hydrangea macrophylla HOM05D005338 ORTHO05D006550 7.9e-54 214.5 151 78.8
Sopen00g011030 Solanum pennellii HOM05D005338 ORTHO05D006550 1.9e-52 209.9 215 56.7
RcHm_v2.0_Chr5g0034471 Rosa chinensis HOM05D005338 ORTHO05D006550 5.5e-47 191.8 119 81.5
Sopen00g003620 Solanum pennellii HOM05D005338 ORTHO05D006550 4.6e-46 188.7 174 59.8
RcHm_v2.0_Chr7g0238871 Rosa chinensis HOM05D005338 ORTHO05D006550 6.7e-45 184.9 110 80.9
SMO236G0041 Selaginella moellendorffii HOM05D005338 ORTHO05D006550 2.1e-43 179.9 162 54.3
Sopen03g021680 Solanum pennellii HOM05D005338 ORTHO05D006550 2.5e-39 166.4 215 49.3
RcHm_v2.0_Chr7g0238881 Rosa chinensis HOM05D005338 ORTHO05D006550 1.1e-34 151.0 91 87.9
TPR.G5804 Trifolium pratense HOM05D005338 ORTHO05D006550 1.2e-33 147.5 84 91.7
Atru.chr1.3597 Acer truncatum HOM05D005338 ORTHO05D006550 1.7e-24 117.1 81 76.5
BcaC04g23293 Brassica carinata HOM05D005338 ORTHO05D006550 5.0e-16 89.0 56 75.0
Atru.chr12.488 Acer truncatum HOM05D005338 ORTHO05D006550 5.5e-15 85.5 45 88.9
SEGI_27973 Sequoiadendron giganteum HOM05D005338 ORTHO05D006550 9.4e-15 84.7 53 73.6
BraA09t41155Z Brassica rapa HOM05D005338 ORTHO05D006550 2.1e-14 83.6 66 69.7
TAR628G1182 Trochodendron aralioides HOM05D005338 ORTHO05D006550 4.7e-14 82.4 46 82.6
MD08G1183200 Malus domestica HOM05D005338 ORTHO05D006550 5.3e-10 68.9 88 45.5
C08p40830 Brassica napus HOM05D005338 ORTHO05D006550 3.2e-07 59.7 34 85.3
BolC8t51648H Brassica oleracea HOM05D005338 ORTHO05D006550 9.4e-07 58.2 34 85.3


User provided reference genes

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