Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 0.0e+00 2558.9 1300 100.0
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 0.0e+00 1876.3 1318 71.9
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 0.0e+00 1706.4 1333 64.7
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1698.7 1332 64.9
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 0.0e+00 1694.5 1326 64.0
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 0.0e+00 1689.9 1327 64.0
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 0.0e+00 1686.8 1326 63.9
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 0.0e+00 1682.9 1328 63.7
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 0.0e+00 1682.9 1326 64.3
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 0.0e+00 1667.1 1332 63.9
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 0.0e+00 1657.5 1320 63.0
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 0.0e+00 1655.6 1322 62.9
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1655.6 1351 62.1
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 0.0e+00 1652.1 1317 63.2
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 0.0e+00 1651.7 1328 63.1
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 0.0e+00 1651.0 1330 63.2
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1646.7 1324 63.2
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 0.0e+00 1627.8 1244 65.2
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1625.1 1331 61.7
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 0.0e+00 1602.0 1323 61.2
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 0.0e+00 1600.5 1329 62.1
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1597.8 1329 61.0
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1583.9 1330 60.8
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 0.0e+00 1583.2 1325 61.8
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 0.0e+00 1582.8 1329 60.3
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 0.0e+00 1582.8 1271 63.5
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1580.1 1332 60.0
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 0.0e+00 1577.0 1332 60.1
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1575.8 1332 60.0
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1575.5 1331 61.1
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 0.0e+00 1575.1 1324 59.9
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 0.0e+00 1574.3 1330 60.7
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1573.5 1332 59.8
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 0.0e+00 1573.1 1326 60.3
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 0.0e+00 1572.4 1320 60.6
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 0.0e+00 1572.4 1330 60.7
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1572.0 1332 59.7
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1571.2 1322 61.1
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 0.0e+00 1570.1 1329 60.6
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 0.0e+00 1567.7 1328 59.8
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 0.0e+00 1558.9 1340 59.0
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1557.0 1249 62.9
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 0.0e+00 1540.4 1337 59.1
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 0.0e+00 1540.0 1328 58.7
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1539.6 1334 59.4
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 0.0e+00 1536.2 1331 59.4
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 0.0e+00 1535.4 1321 60.0
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 0.0e+00 1533.9 1332 59.5
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1523.8 1321 59.7
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1523.1 1329 58.6
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 0.0e+00 1522.7 1554 54.1
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 0.0e+00 1521.1 1324 58.7
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1514.2 1244 61.7
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 0.0e+00 1513.8 1311 58.8
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 0.0e+00 1512.7 1341 57.5
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 0.0e+00 1512.3 1334 58.8
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 0.0e+00 1509.2 1333 59.3
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 0.0e+00 1505.3 1274 61.2
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 0.0e+00 1504.2 1326 57.2
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1503.8 1333 58.5
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 0.0e+00 1501.9 1307 58.9
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1501.5 1250 60.5
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1494.6 1333 58.4
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 0.0e+00 1494.2 1322 58.1
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1489.6 1341 57.4
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 0.0e+00 1488.0 1333 57.5
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 0.0e+00 1480.3 1305 58.0
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 0.0e+00 1478.0 1314 58.1
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 0.0e+00 1475.3 1328 57.2
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 0.0e+00 1464.1 1260 58.9
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 0.0e+00 1463.0 1321 57.3
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 0.0e+00 1444.9 1281 60.0
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 0.0e+00 1434.5 1324 56.5
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 0.0e+00 1424.8 1324 56.6
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1421.0 1322 56.8
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 0.0e+00 1418.3 1323 56.8
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1413.7 1323 56.6
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 0.0e+00 1408.3 1327 56.3
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 0.0e+00 1405.6 1324 55.5
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1404.4 1194 59.5
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 0.0e+00 1402.9 1325 55.8
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 0.0e+00 1389.0 1324 55.3
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1381.3 1092 63.3
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 0.0e+00 1375.9 1353 53.2
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 0.0e+00 1373.2 1105 62.9
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 0.0e+00 1326.6 1330 54.1
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 0.0e+00 1321.2 1342 51.0
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 0.0e+00 1306.6 1327 50.9
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 0.0e+00 1285.4 1109 58.6
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1285.0 1135 57.9
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 0.0e+00 1257.3 1090 58.2
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 0.0e+00 1239.6 1144 56.8
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 0.0e+00 1238.0 1321 50.2
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 0.0e+00 1236.5 1353 49.8
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 0.0e+00 1194.5 1316 50.9
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 0.0e+00 1140.2 942 61.0
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 0.0e+00 1113.2 1332 47.7
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 0.0e+00 1100.9 859 64.6
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 3.9e-310 1068.5 904 59.0
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 1.3e-305 1053.5 1260 46.6
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 8.8e-294 1014.2 760 67.1
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 1.3e-289 1000.3 846 58.9
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 1.2e-245 854.4 1374 37.9
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 2.0e-229 800.4 1288 38.0
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 4.5e-221 772.7 1145 38.7
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 1.1e-219 768.1 1154 40.2
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 2.6e-200 703.7 806 49.9
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 3.8e-164 583.6 460 68.9
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 8.3e-151 539.3 1622 27.8
arahy.Tifrunner.gnm1.ann1.1A0WRJ Arachis hypogaea HOM05D006356 ORTHO05D007903 4.4e-128 463.8 378 60.3
Cpa.g.sc1.372 Carica papaya HOM05D006356 ORTHO05D007903 1.6e-122 445.3 356 64.0
Actinidia02967 Actinidia chinensis HOM05D006356 ORTHO05D007903 1.2e-88 332.8 315 57.1
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 5.9e-88 330.5 1449 26.4
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 2.3e-84 318.5 1526 25.2
Nn4g26017 Nelumbo nucifera HOM05D006356 ORTHO05D007903 4.8e-74 284.3 252 54.8
TAR225G0003 Trochodendron aralioides HOM05D002467 ORTHO05D003907 1.0e-60 240.0 1180 25.3
Psat2g034240 Pisum sativum HOM05D006356 ORTHO05D007903 2.6e-59 235.3 317 42.0
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 4.1e-57 228.0 196 62.2
PRCOL_00001522 Prasinoderma coloniale HOM05D006356 ORTHO05D007903 1.2e-51 209.9 1359 24.9
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 9.5e-46 190.3 147 66.7
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 1.2e-40 173.3 130 70.8
Psat0s3149g0040 Pisum sativum HOM05D006356 ORTHO05D007903 3.5e-40 171.8 198 45.5
Psat0s3149g0080 Pisum sativum HOM05D006356 ORTHO05D007903 3.6e-37 161.8 221 41.2
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 1.4e-36 159.8 121 69.4
Lj5g0016728 Lotus japonicus HOM05D006356 ORTHO05D007903 1.3e-26 126.7 278 36.3
AUR62038375 Chenopodium quinoa HOM05D006356 ORTHO05D007903 1.9e-25 122.9 136 52.2


User provided reference genes

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