Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00070 Erythranthe guttata HOM05D001715 ORTHO05D004824 1.5e-147 526.2 269 100.0
MSTRG.24047 Avicennia marina HOM05D001715 ORTHO05D004824 5.6e-118 427.9 270 81.1
MSTRG.3136 Avicennia marina HOM05D001715 ORTHO05D004824 3.8e-114 415.2 269 80.3
SGA_v2.0_scaffold18G08270 Striga asiatica HOM05D001715 ORTHO05D004824 2.4e-113 412.5 255 83.9
Lsat_1_v5_gn_4_184360 Lactuca sativa HOM05D001715 ORTHO05D004824 1.0e-111 407.1 271 75.6
Cc07_g00030 Coffea canephora HOM05D001715 ORTHO05D004824 2.1e-109 399.4 271 74.9
HanXRQChr09g0255491 Helianthus annuus HOM05D001715 ORTHO05D004824 2.8e-109 399.1 272 73.9
CSS0010910 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 8.1e-109 397.5 272 73.9
Dinv33423 Davidia involucrata HOM05D001715 ORTHO05D004824 1.1e-108 397.1 271 74.5
unitig_748.g6979 Utricularia gibba HOM05D001715 ORTHO05D004824 3.4e-107 392.1 250 79.2
CANSAT64G1664 Cannabis sativa HOM05D001715 ORTHO05D004824 2.9e-106 389.0 273 72.5
Actinidia36126 Actinidia chinensis HOM05D001715 ORTHO05D004824 4.9e-106 388.3 272 72.4
Hma1.2p1_1747F.1_g300590 Hydrangea macrophylla HOM05D001715 ORTHO05D004824 1.4e-105 386.7 270 72.6
Actinidia05979 Actinidia chinensis HOM05D001715 ORTHO05D004824 2.4e-105 386.0 272 71.3
Potri.001G342700 Populus trichocarpa HOM05D001715 ORTHO05D004824 1.6e-104 383.3 272 72.4
PGSC0003DMG400012610 Solanum tuberosum HOM05D001715 ORTHO05D004824 1.6e-104 383.3 271 71.2
DCAR_015064 Daucus carota HOM05D001715 ORTHO05D004824 4.6e-104 381.7 269 69.5
Glyma.16G069000 Glycine max HOM05D001715 ORTHO05D004824 4.6e-104 381.7 272 70.2
Lju41A43T27 Lonicera japonica HOM05D001715 ORTHO05D004824 1.0e-103 380.6 284 69.4
Solyc02g093490.3 Solanum lycopersicum HOM05D001715 ORTHO05D004824 1.0e-103 380.6 271 70.5
Glyma.19G055900 Glycine max HOM05D001715 ORTHO05D004824 6.6e-103 377.9 274 69.7
Manes.17G110800 Manihot esculenta HOM05D001715 ORTHO05D004824 1.1e-102 377.1 272 71.0
Medtr7g033200 Medicago truncatula HOM05D001715 ORTHO05D004824 1.9e-102 376.3 271 69.7
Peaxi162Scf00420g00131 Petunia axillaris HOM05D001715 ORTHO05D004824 4.3e-102 375.2 297 66.3
Lalb_Chr24g0403561 Lupinus albus HOM05D001715 ORTHO05D004824 7.3e-102 374.4 275 68.7
Sopen02g038180 Solanum pennellii HOM05D001715 ORTHO05D004824 7.3e-102 374.4 271 70.1
Lalb_Chr22g0360701 Lupinus albus HOM05D001715 ORTHO05D004824 1.3e-101 373.6 275 68.7
TPR.G1113 Trifolium pratense HOM05D001715 ORTHO05D004824 1.3e-101 373.6 271 68.6
Lj1g0020864 Lotus japonicus HOM05D001715 ORTHO05D004824 2.1e-101 372.9 271 68.3
FAN19G0324 Fragaria x ananassa HOM05D001715 ORTHO05D004824 2.8e-101 372.5 272 70.2
FAN28G2154 Fragaria x ananassa HOM05D001715 ORTHO05D004824 3.6e-101 372.1 272 70.2
HanXRQChr15g0486831 Helianthus annuus HOM05D001715 ORTHO05D004824 3.6e-101 372.1 271 71.2
Atru.chr6.2434 Acer truncatum HOM05D001715 ORTHO05D004824 6.2e-101 371.3 271 70.5
MD17G1021800 Malus domestica HOM05D001715 ORTHO05D004824 1.8e-100 369.8 272 71.3
Phvul.001G096400 Phaseolus vulgaris HOM05D001715 ORTHO05D004824 1.8e-100 369.8 274 68.6
Psat3g166200 Pisum sativum HOM05D001715 ORTHO05D004824 1.8e-100 369.8 272 68.8
VMungo1383G3508 Vigna mungo HOM05D001715 ORTHO05D004824 4.0e-100 368.6 273 68.1
FvH4_1g25240 Fragaria vesca HOM05D001715 ORTHO05D004824 5.3e-100 368.2 272 70.2
Ca_10003_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 6.9e-100 367.9 273 68.5
TWI12G0372 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 2.6e-99 365.9 274 69.3
CiPaw.03G045800 Carya illinoinensis HOM05D001715 ORTHO05D004824 3.4e-99 365.5 272 68.4
Prupe.3G294200 Prunus persica HOM05D001715 ORTHO05D004824 7.6e-99 364.4 272 69.1
THA.LOC104825315 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 2.2e-98 362.8 274 69.0
RcHm_v2.0_Chr2g0123161 Rosa chinensis HOM05D001715 ORTHO05D004824 2.9e-98 362.5 272 69.5
TWI12G0250 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 2.9e-98 362.5 274 68.6
TWI12G0380 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 2.9e-98 362.5 274 68.6
COL.COLO4_29175 Corchorus olitorius HOM05D001715 ORTHO05D004824 3.8e-98 362.1 272 67.3
Duzib147G1449 Durio zibethinus HOM05D001715 ORTHO05D004824 3.8e-98 362.1 272 66.5
Ciclev10016259m.g Citrus clementina HOM05D001715 ORTHO05D004824 4.9e-98 361.7 271 68.6
MD09G1022400 Malus domestica HOM05D001715 ORTHO05D004824 6.4e-98 361.3 271 70.5
TWI12G0217 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 6.4e-98 361.3 274 68.6
THA.LOC104805361 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 8.4e-98 360.9 274 69.0
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 1.9e-97 359.8 275 69.5
Thecc.04G019800 Theobroma cacao HOM05D001715 ORTHO05D004824 2.4e-97 359.4 272 66.5
AL5G16870 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 4.2e-97 358.6 273 69.6
FAN23G2554 Fragaria x ananassa HOM05D001715 ORTHO05D004824 5.4e-97 358.2 283 66.8
GSVIVG01032368001 Vitis vinifera HOM05D001715 ORTHO05D004824 5.4e-97 358.2 284 66.9
CARHR148830 Cardamine hirsuta HOM05D001715 ORTHO05D004824 9.3e-97 357.5 272 69.5
BcaC06g33817 Brassica carinata HOM05D001715 ORTHO05D004824 1.6e-96 356.7 271 68.3
Cfa007336 Carpinus fangiana HOM05D001715 ORTHO05D004824 2.1e-96 356.3 275 67.3
Dinv25723 Davidia involucrata HOM05D001715 ORTHO05D004510 2.7e-96 355.9 258 72.1
Carub.0005s0587 Capsella rubella HOM05D001715 ORTHO05D004824 3.5e-96 355.5 273 69.6
Eucgr.J02260 Eucalyptus grandis HOM05D001715 ORTHO05D004824 3.5e-96 355.5 271 66.1
Gohir.D11G070100 Gossypium hirsutum HOM05D001715 ORTHO05D004824 3.5e-96 355.5 272 65.4
Gorai.007G075200 Gossypium raimondii HOM05D001715 ORTHO05D004824 3.5e-96 355.5 272 65.4
Sabra16G0222300 Salix brachista HOM05D001715 ORTHO05D004824 7.9e-96 354.4 299 63.5
Sp2g16670 Schrenkiella parvula HOM05D001715 ORTHO05D004824 1.0e-95 354.0 271 69.0
BcaC06g30988 Brassica carinata HOM05D001715 ORTHO05D004824 1.3e-95 353.6 273 67.8
Carub.0007s3497 Capsella rubella HOM05D001715 ORTHO05D004824 1.3e-95 353.6 275 67.6
vmacro07988 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 1.3e-95 353.6 287 65.9
arahy.Tifrunner.gnm1.ann1.VP8W98 Arachis hypogaea HOM05D001715 ORTHO05D004824 1.8e-95 353.2 272 68.8
A06p41160 Brassica napus HOM05D001715 ORTHO05D003849 2.3e-95 352.8 273 67.8
Aa31LG2G5160 Aethionema arabicum HOM05D001715 ORTHO05D004824 5.1e-95 351.7 271 67.9
C07p36500 Brassica napus HOM05D001715 ORTHO05D003849 5.1e-95 351.7 273 67.8
BolC7t44170H Brassica oleracea HOM05D001715 ORTHO05D004824 5.1e-95 351.7 273 67.8
AT5G40550 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 6.7e-95 351.3 273 67.4
Lj7A601T103 Lonicera japonica HOM05D001715 ORTHO05D004824 6.7e-95 351.3 294 60.9
TAR374G1502 Trochodendron aralioides HOM05D001715 ORTHO05D004824 6.7e-95 351.3 273 66.7
Gohir.A07G224000 Gossypium hirsutum HOM05D001715 ORTHO05D004824 8.7e-95 350.9 272 64.7
CARHR261430 Cardamine hirsuta HOM05D001715 ORTHO05D004824 1.1e-94 350.5 272 67.3
Gohir.D07G231300 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.5e-94 350.1 272 64.7
Gorai.001G266400 Gossypium raimondii HOM05D001715 ORTHO05D004824 1.5e-94 350.1 272 64.7
Rhsim10G0014300 Rhododendron simsii HOM05D001715 ORTHO05D004824 4.3e-94 348.6 278 66.5
arahy.Tifrunner.gnm1.ann1.Q5RJ9B Arachis hypogaea HOM05D001715 ORTHO05D004824 5.6e-94 348.2 274 68.2
AL7G49260 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 1.6e-93 346.7 275 66.9
MD17G1021900 Malus domestica HOM05D001715 ORTHO05D004824 1.6e-93 346.7 271 67.5
Gorai.012G065400 Gossypium raimondii HOM05D001715 ORTHO05D004824 6.2e-93 344.7 272 63.6
PGR083G0973 Punica granatum HOM05D001715 ORTHO05D004824 6.2e-93 344.7 272 64.7
Gohir.D04G058700 Gossypium hirsutum HOM05D001715 ORTHO05D004824 8.1e-93 344.4 272 64.0
PGR142G0496 Punica granatum HOM05D001715 ORTHO05D004824 1.1e-92 344.0 271 65.7
QL05p032480 Quercus lobata HOM05D001715 ORTHO05D004824 1.1e-92 344.0 308 60.1
QL05p033603 Quercus lobata HOM05D001715 ORTHO05D004824 1.1e-92 344.0 308 60.1
Gohir.A05G354400 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.4e-92 343.6 272 64.0
Duzib187G0323 Durio zibethinus HOM05D001715 ORTHO05D004824 1.8e-92 343.2 272 63.2
Aqoxy5G03737 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 5.3e-92 341.7 275 65.8
Thhalv10004728m.g Eutrema salsugineum HOM05D001715 ORTHO05D004824 9.0e-92 340.9 286 64.0
Ca_12396_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 4.5e-91 338.6 344 54.1
TAR622G0120 Trochodendron aralioides HOM05D001715 ORTHO05D004824 4.5e-91 338.6 275 65.5
Haze_14762 Corylus avellana HOM05D001715 ORTHO05D004824 2.2e-90 336.3 331 56.5
Oeu035801.2 Olea europaea HOM05D001715 ORTHO05D004824 6.4e-90 334.7 235 71.9
PSO063G0233 Papaver somniferum HOM05D001715 ORTHO05D004824 1.9e-89 333.2 274 63.9
PSO754G0079 Papaver somniferum HOM05D001715 ORTHO05D004824 1.9e-89 333.2 274 63.9
Ah.02g128230 Amaranthus hybridus HOM05D001715 ORTHO05D004824 2.4e-89 332.8 273 63.4
CAN.G473.27 Capsicum annuum HOM05D001715 ORTHO05D004824 7.1e-89 331.3 237 70.0
ClCG10G013770 Citrullus lanatus HOM05D001715 ORTHO05D004824 9.3e-89 330.9 274 66.4
CsaV3_3G042890 Cucumis sativus L. HOM05D001715 ORTHO05D004824 9.3e-89 330.9 274 66.1
Manes.15G152100 Manihot esculenta HOM05D001715 ORTHO05D004824 9.3e-89 330.9 240 70.4
THA.LOC104823958 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 9.3e-89 330.9 274 63.5
Hund15533 Selenicereus undatus HOM05D001715 ORTHO05D004824 3.5e-88 328.9 275 64.0
CDE04G1703 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 6.7e-87 324.7 274 63.1
CDE07G0729 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 1.5e-86 323.6 274 63.1
MELO3C026589.2 Cucumis melo HOM05D001715 ORTHO05D004824 1.3e-85 320.5 274 65.3
A02p35490 Brassica napus HOM05D001715 ORTHO05D003849 8.1e-85 317.8 272 62.1
C02p54210 Brassica napus HOM05D001715 ORTHO05D003849 1.8e-84 316.6 272 62.1
SHI03767 Sapria himalayana HOM05D001715 ORTHO05D004824 3.1e-84 315.8 271 60.9
Cpa.g.sc108.80 Carica papaya HOM05D001715 ORTHO05D004824 1.2e-83 313.9 234 67.1
AT3G27460 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 1.5e-83 313.5 234 68.8
HPP92_019596 Vanilla planifolia HOM05D001715 ORTHO05D004824 7.6e-83 311.2 274 61.7
Gohir.A11G065900 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.7e-82 310.1 235 64.3
Zm00001eb409000 Zea mays HOM05D001715 ORTHO05D004824 3.8e-82 308.9 268 60.1
ATR0824G003 Amborella trichopoda HOM05D001715 ORTHO05D004824 1.4e-81 307.0 278 62.2
BraA06t27038Z Brassica rapa HOM05D001715 ORTHO05D004824 2.5e-81 306.2 236 66.9
AUR62033204 Chenopodium quinoa HOM05D001715 ORTHO05D004824 3.0e-79 299.3 333 52.3
BcaB07g30155 Brassica carinata HOM05D001715 ORTHO05D004824 6.7e-79 298.1 277 61.0
BolC2t11484H Brassica oleracea HOM05D001715 ORTHO05D004824 1.9e-78 296.6 276 60.1
Nitab4.5_0006683g0120 Nicotiana tabacum HOM05D001715 ORTHO05D004824 5.7e-78 295.0 271 60.1
Os12g0290600 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D004824 1.6e-77 293.5 268 59.3
SGA_v2.0_scaffold47G17520 Striga asiatica HOM05D001715 ORTHO05D004824 2.1e-77 293.1 235 68.1
BraA02t08550Z Brassica rapa HOM05D001715 ORTHO05D003849 2.8e-77 292.7 317 53.9
MBI11_g21317_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D004824 2.2e-74 283.1 360 48.1
Sed0015141 Sechium edule HOM05D001715 ORTHO05D004824 2.9e-74 282.7 237 64.6
QL02p073949 Quercus lobata HOM05D001715 ORTHO05D004824 5.0e-74 282.0 352 48.0
BcaC03g17465 Brassica carinata HOM05D001715 ORTHO05D003849 1.0e-71 274.2 264 58.7
Nn4g22578 Nelumbo nucifera HOM05D001715 ORTHO05D004824 5.7e-70 268.5 237 61.6
Sc03g0007260 Simmondsia chinensis HOM05D001715 ORTHO05D004824 5.7e-70 268.5 232 61.2
arahy.Tifrunner.gnm1.ann1.3H0FM5 Arachis hypogaea HOM05D001715 ORTHO05D004824 4.1e-68 262.3 280 53.2
Peaxi162Scf00700g00435 Petunia axillaris HOM05D001715 ORTHO05D004824 9.1e-68 261.2 230 60.4
FAN26G1929 Fragaria x ananassa HOM05D001715 ORTHO05D004824 1.1e-65 254.2 285 51.2
Rhsim08G0048300 Rhododendron simsii HOM05D001715 ORTHO05D004824 7.2e-65 251.5 273 51.3
CSS0002803 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 1.3e-61 240.7 177 70.1
Duzib264G0165 Durio zibethinus HOM05D001715 ORTHO05D004824 6.3e-61 238.4 185 63.8
Nitab4.5_0001562g0140 Nicotiana tabacum HOM05D001715 ORTHO05D004824 2.9e-58 229.6 166 70.5
SEGI_05213 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 3.8e-58 229.2 268 50.7
AUR62041236 Chenopodium quinoa HOM05D001715 ORTHO05D004824 5.0e-58 228.8 205 59.0
Pp3c21_7830 Physcomitrium patens HOM05D001715 ORTHO05D004824 2.5e-57 226.5 262 49.6
Pp3c18_8800 Physcomitrium patens HOM05D001715 ORTHO05D004824 9.4e-57 224.6 262 49.6
Mapoly0074s0018 Marchantia polymorpha HOM05D001715 ORTHO05D004824 3.0e-55 219.5 271 48.7
Medtr7g033170 Medicago truncatula HOM05D001715 ORTHO05D004824 3.9e-55 219.2 176 64.2
Duzib187G0149 Durio zibethinus HOM05D001715 ORTHO05D004824 2.6e-54 216.5 175 61.7
SMO119G0416 Selaginella moellendorffii HOM05D001715 ORTHO05D004824 9.7e-54 214.5 277 46.6
ECA232G3480 Erigeron canadensis HOM05D001715 ORTHO05D004824 2.0e-51 206.8 134 74.6
SGA_v2.0_scaffold135G34914 Striga asiatica HOM05D001715 ORTHO05D004824 8.5e-50 201.4 133 81.2
Gorai.001G266500 Gossypium raimondii HOM05D001715 ORTHO05D004824 1.6e-48 197.2 177 58.2
PSO478G2184 Papaver somniferum HOM05D001715 ORTHO05D004824 2.3e-47 193.4 165 62.4
vmacro18295 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 6.3e-45 185.3 205 50.2
BolC2t11492H Brassica oleracea HOM05D001715 ORTHO05D004824 7.0e-44 181.8 150 65.3
Rhsim10G0017400 Rhododendron simsii HOM05D001715 ORTHO05D004824 9.1e-44 181.4 258 45.0
EL10As9g23941 Beta vulgaris HOM05D001715 ORTHO05D004824 1.1e-41 174.5 171 56.7
Cc07_g20220 Coffea canephora HOM05D001715 ORTHO05D004824 1.5e-41 174.1 217 48.4
C02p54270 Brassica napus HOM05D001715 ORTHO05D004824 2.5e-41 173.3 143 66.4
AagrBONN_evm.TU.Sc2ySwM_344.5345 Anthoceros agrestis HOM05D001715 ORTHO05D004824 7.2e-41 171.8 262 42.0
Gohir.D07G231366 Gossypium hirsutum HOM05D001715 ORTHO05D004824 4.4e-38 162.5 119 67.2
CBR_g1018 Chara braunii HOM05D001161 ORTHO05D000497 1.7e-37 160.6 152 59.9
Aa31LG9G1060 Aethionema arabicum HOM05D004782 ORTHO05D005498 6.3e-37 158.7 236 41.5
vmacro18298 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 4.1e-36 156.0 186 46.8
SGA_v2.0_scaffold131G34424 Striga asiatica HOM05D001715 ORTHO05D004824 3.2e-33 146.4 272 41.2
vmacro18296 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 4.2e-33 146.0 166 46.4
SEGI_27231 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 8.0e-32 141.7 143 54.5
CiPaw.15G158300 Carya illinoinensis HOM05D001715 ORTHO05D004824 1.8e-23 114.0 74 75.7
Aqoxy3G03035 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 4.0e-23 112.8 147 46.9
Oeu033726.1 Olea europaea HOM05D001715 ORTHO05D004824 4.0e-23 112.8 86 69.8
Oeu021199.1 Olea europaea HOM05D001715 ORTHO05D004824 2.4e-20 103.6 75 69.3
CiPaw.15G157800 Carya illinoinensis HOM05D001715 ORTHO05D004824 5.4e-20 102.4 64 76.6
vmacro18297 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 2.3e-18 97.1 67 68.7
Oeu043035.1 Olea europaea HOM05D001715 ORTHO05D004824 2.5e-17 93.6 78 62.8
Mapoly0009s0091 Marchantia polymorpha HOM05D001715 ORTHO05D004824 4.7e-16 89.4 256 31.6
CSS0016932 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 9.5e-09 65.1 42 73.8


User provided reference genes

Program Settings