Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G01245 Erythranthe guttata HOM05D000216 ORTHO05D000634 7.8e-64 246.9 119 100.0
Migut.D01341 Erythranthe guttata HOM05D000216 ORTHO05D000634 4.9e-42 174.5 92 94.6
MSTRG.17791 Avicennia marina HOM05D000216 ORTHO05D000634 4.8e-37 157.9 90 90.0
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 5.7e-30 134.4 92 76.1
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 2.1e-29 132.5 94 75.5
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.8e-29 131.3 94 74.5
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 6.2e-29 131.0 86 77.9
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 1.1e-28 130.2 92 72.8
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 2.4e-28 129.0 95 72.6
SGA_v2.0_scaffold132G34498 Striga asiatica HOM05D000216 ORTHO05D000634 2.9e-26 122.1 84 70.2
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 1.9e-25 119.4 92 67.4
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 2.5e-25 119.0 94 72.3
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 4.2e-25 118.2 87 71.3
HanXRQChr14g0455001 Helianthus annuus HOM05D000216 ORTHO05D000634 5.5e-25 117.9 88 71.6
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 1.2e-24 116.7 85 71.8
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 1.6e-24 116.3 93 68.8
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 6.1e-24 114.4 86 69.8
HanXRQChr00c0300g0573181 Helianthus annuus HOM05D000216 ORTHO05D000634 5.1e-23 111.3 88 69.3
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 5.1e-23 111.3 88 69.3
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 5.1e-23 111.3 88 69.3
HanXRQChr14g0436641 Helianthus annuus HOM05D000216 ORTHO05D000634 5.1e-23 111.3 88 69.3
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 5.1e-23 111.3 88 69.3
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 7.4e-22 107.5 92 60.9
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 6.3e-21 104.4 91 61.5
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 6.3e-21 104.4 92 65.2
Gohir.A07G183950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.1e-20 103.6 96 59.4
Solyc01g056330.2 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.8e-20 102.8 76 72.4
CsaV3_UNG207810 Cucumis sativus L. HOM05D000216 ORTHO05D000634 4.1e-20 101.7 91 61.5
Gorai.013G018800 Gossypium raimondii HOM05D000216 ORTHO05D000634 6.9e-20 100.9 83 67.5
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 1.5e-19 99.8 87 64.4
Potri.019G027720 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.5e-19 99.8 76 72.4
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 4.5e-19 98.2 89 60.7
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-19 98.2 90 56.7
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-19 98.2 90 56.7
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-19 98.2 90 56.7
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-19 98.2 90 56.7
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-19 98.2 90 56.7
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-19 98.2 90 56.7
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-19 98.2 90 56.7
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-19 98.2 90 56.7
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-19 98.2 90 56.7
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-19 98.2 90 56.7
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-19 98.2 90 56.7
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-19 98.2 90 56.7
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-19 98.2 90 56.7
Hund31462 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-19 98.2 90 56.7
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 2.2e-18 95.9 94 55.3
Hund04024 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.0e-18 94.7 88 56.8
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 8.5e-18 94.0 62 79.0
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 8.5e-18 94.0 62 79.0
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 8.5e-18 94.0 62 79.0
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 8.5e-18 94.0 62 79.0
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 2.1e-16 89.4 87 59.8
Hund15943 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.8e-15 86.3 90 52.2
Gohir.D13G016950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 3.0e-15 85.5 72 65.3
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 6.7e-15 84.3 92 56.5
Medtr7g116700 Medicago truncatula HOM05D000216 ORTHO05D000634 2.0e-14 82.8 74 56.8
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 9.7e-14 80.5 92 55.4
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 9.7e-14 80.5 92 55.4
BraSC140t45608Z Brassica rapa HOM05D000216 ORTHO05D000634 9.7e-14 80.5 92 55.4
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 9.7e-14 80.5 92 55.4
HanXRQChr00c0313g0573471 Helianthus annuus HOM05D000216 ORTHO05D000634 3.1e-12 75.5 66 65.2
Gorai.004G210400 Gossypium raimondii HOM05D000216 ORTHO05D000634 5.3e-12 74.7 77 58.4
Gohir.D08G199601 Gossypium hirsutum HOM05D000216 ORTHO05D000634 2.9e-10 68.9 79 53.2
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 8.5e-10 67.4 87 48.3
Zm00001eb314280 Zea mays HOM05D000216 ORTHO05D000634 1.4e-09 66.6 87 47.1
Zm00001eb434960 Zea mays HOM05D000216 ORTHO05D000634 1.4e-09 66.6 87 47.1
Zm00001eb435270 Zea mays HOM05D000216 ORTHO05D000634 1.4e-09 66.6 87 47.1
Zm00001eb435480 Zea mays HOM05D000216 ORTHO05D000634 1.4e-09 66.6 87 47.1
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 1.4e-09 66.6 87 47.1
Zm00001eb437260 Zea mays HOM05D000216 ORTHO05D000634 1.4e-09 66.6 87 47.1
Thhalv10023328m.g Eutrema salsugineum HOM05D000216 ORTHO05D000634 7.2e-09 64.3 90 42.2
TPR.G2741 Trifolium pratense HOM05D000216 ORTHO05D000634 7.2e-09 64.3 99 47.5
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 3.3e-06 55.5 87 44.8


User provided reference genes

Program Settings