Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E01408 Erythranthe guttata HOM05D006943 ORTHO05D008565 5.8e-164 580.9 301 100.0
Migut.E01420 Erythranthe guttata HOM05D006943 ORTHO05D008565 5.8e-164 580.9 301 100.0
SalBow8G0710 Salvia bowleyana HOM05D006943 ORTHO05D008565 3.2e-90 335.9 295 62.0
Oeu008780.1 Olea europaea HOM05D006943 ORTHO05D008565 6.3e-86 321.6 296 59.1
Cc10_g14290 Coffea canephora HOM05D006943 ORTHO05D008565 5.8e-55 218.8 305 44.6
MSTRG.13940 Avicennia marina HOM05D006943 ORTHO05D008565 1.6e-49 200.7 156 68.6
MSTRG.13929 Avicennia marina HOM05D006943 ORTHO05D008565 1.4e-48 197.6 148 70.3
Sopen08g022790 Solanum pennellii HOM05D006943 ORTHO05D008565 3.7e-46 189.5 337 40.1
Solyc08g069160.3 Solanum lycopersicum HOM05D006943 ORTHO05D008565 3.2e-45 186.4 337 39.8
Dinv37491 Davidia involucrata HOM05D006943 ORTHO05D008565 7.1e-45 185.3 304 40.8
Nitab4.5_0001942g0070 Nicotiana tabacum HOM05D006943 ORTHO05D008565 7.1e-45 185.3 338 39.6
PGSC0003DMG400029553 Solanum tuberosum HOM05D006943 ORTHO05D008565 1.2e-44 184.5 336 39.6
Nitab4.5_0005058g0010 Nicotiana tabacum HOM05D006943 ORTHO05D008565 4.3e-42 176.0 337 38.3
CAN.G480.10 Capsicum annuum HOM05D006943 ORTHO05D008565 3.8e-38 162.9 337 36.2
Peaxi162Scf00213g00939 Petunia axillaris HOM05D006943 ORTHO05D008565 1.9e-37 160.6 336 36.6
MSTRG.13928 Avicennia marina HOM05D006943 ORTHO05D008565 3.2e-37 159.8 141 58.9
MSTRG.13939 Avicennia marina HOM05D006943 ORTHO05D008565 9.2e-37 158.3 141 58.2
VMungo0647G1044 Vigna mungo HOM05D006943 ORTHO05D008565 3.5e-36 156.4 331 36.6
MSTRG.13927 Avicennia marina HOM05D006943 ORTHO05D008565 6.0e-36 155.6 138 58.7
MSTRG.13926 Avicennia marina HOM05D006943 ORTHO05D008565 1.0e-35 154.8 138 59.4
HanXRQChr03g0081291 Helianthus annuus HOM05D006943 ORTHO05D008565 1.3e-35 154.5 292 38.7
GSVIVG01035569001 Vitis vinifera HOM05D006943 ORTHO05D008565 5.1e-35 152.5 289 36.3
Lsat_1_v5_gn_3_68681 Lactuca sativa HOM05D006943 ORTHO05D008565 2.5e-34 150.2 285 40.7
Actinidia25739 Actinidia chinensis HOM05D006943 ORTHO05D008565 9.6e-34 148.3 289 37.4
ECA246G0365 Erigeron canadensis HOM05D006943 ORTHO05D008565 2.8e-33 146.7 281 37.7
Atru.chr7.2692 Acer truncatum HOM05D006943 ORTHO05D008565 4.0e-32 142.9 282 36.2
TAR636G0756 Trochodendron aralioides HOM05D006943 ORTHO05D008565 4.0e-32 142.9 288 32.6
Cpa.g.sc148.5 Carica papaya HOM05D006943 ORTHO05D008565 6.9e-32 142.1 313 32.6
Lsat_1_v5_gn_5_56401 Lactuca sativa HOM05D006943 ORTHO05D008565 1.2e-31 141.4 280 40.4
Phvul.001G077900 Phaseolus vulgaris HOM05D006943 ORTHO05D008565 5.8e-31 139.0 330 33.9
Ciclev10009072m.g Citrus clementina HOM05D006943 ORTHO05D008565 7.6e-31 138.7 309 35.0
TWI63G1698 Tripterygium wilfordii HOM05D006943 ORTHO05D008565 1.3e-30 137.9 289 34.9
Haze_21789 Corylus avellana HOM05D006943 ORTHO05D008565 2.9e-30 136.7 306 36.9
Psat6g033160 Pisum sativum HOM05D006943 ORTHO05D008565 2.9e-30 136.7 310 34.8
HanXRQChr17g0539241 Helianthus annuus HOM05D006943 ORTHO05D008565 2.4e-29 133.7 293 35.2
Medtr1g009220 Medicago truncatula HOM05D006943 ORTHO05D008565 2.4e-29 133.7 337 32.9
AT4G31270 Arabidopsis thaliana HOM05D006943 ORTHO05D008565 4.2e-29 132.9 324 32.4
AL7G20800 Arabidopsis lyrata HOM05D006943 ORTHO05D008565 3.5e-28 129.8 327 31.2
QL12p025818 Quercus lobata HOM05D006943 ORTHO05D008565 3.5e-28 129.8 329 34.0
AUR62038724 Chenopodium quinoa HOM05D006943 ORTHO05D008565 4.6e-28 129.4 288 34.4
AUR62043827 Chenopodium quinoa HOM05D006943 ORTHO05D008565 4.6e-28 129.4 288 34.4
Cfa013306 Carpinus fangiana HOM05D006943 ORTHO05D008565 6.0e-28 129.0 311 35.0
Sc06g0001270 Simmondsia chinensis HOM05D006943 ORTHO05D008565 6.0e-28 129.0 314 31.5
Ca_01518_v3 Cicer arietinum L. HOM05D006943 ORTHO05D008565 7.8e-28 128.6 332 32.2
Nn5g27072 Nelumbo nucifera HOM05D006943 ORTHO05D008565 3.0e-27 126.7 291 30.9
Duzib168G0749 Durio zibethinus HOM05D006943 ORTHO05D008565 5.1e-27 125.9 303 34.0
THA.LOC104803585 Tarenaya hassleriana HOM05D006943 ORTHO05D008565 6.6e-27 125.6 305 34.4
CANSAT35G2034 Cannabis sativa HOM05D006943 ORTHO05D008565 8.7e-27 125.2 327 32.4
Lalb_Chr22g0361191 Lupinus albus HOM05D006943 ORTHO05D008565 1.5e-26 124.4 355 31.0
AUR62020649 Chenopodium quinoa HOM05D006943 ORTHO05D008565 4.3e-26 122.9 288 33.7
ECA240G4190 Erigeron canadensis HOM05D006943 ORTHO05D008565 5.6e-26 122.5 289 35.3
Lj5g0018295 Lotus japonicus HOM05D006943 ORTHO05D008565 7.3e-26 122.1 346 28.9
ClCG05G026350 Citrullus lanatus HOM05D006943 ORTHO05D008565 1.3e-25 121.3 293 35.5
Carub.0007s0929 Capsella rubella HOM05D006943 ORTHO05D008565 1.6e-25 120.9 308 31.5
CARHR239150 Cardamine hirsuta HOM05D006943 ORTHO05D008565 4.8e-25 119.4 297 31.6
Dinv38807 Davidia involucrata HOM05D006943 ORTHO05D008565 4.8e-25 119.4 168 44.0
CsaV3_3G047250 Cucumis sativus L. HOM05D006943 ORTHO05D008565 6.2e-25 119.0 306 34.6
Aa31LG2G19090 Aethionema arabicum HOM05D006943 ORTHO05D008565 1.1e-24 118.2 309 32.7
MELO3C003604.2 Cucumis melo HOM05D006943 ORTHO05D008565 4.0e-24 116.3 300 33.7
DCAR_004562 Daucus carota HOM05D006943 ORTHO05D008565 6.9e-24 115.5 290 32.1
Sed0013911 Sechium edule HOM05D006943 ORTHO05D008565 1.5e-23 114.4 285 34.0
Thhalv10025787m.g Eutrema salsugineum HOM05D006943 ORTHO05D008565 2.6e-23 113.6 338 30.5
COL.COLO4_18631 Corchorus olitorius HOM05D006943 ORTHO05D008565 3.4e-23 113.2 325 31.1
Ah.11g044140 Amaranthus hybridus HOM05D006943 ORTHO05D008565 1.7e-22 110.9 301 31.2
EL10Ac2g03684 Beta vulgaris HOM05D006943 ORTHO05D008565 2.9e-22 110.2 299 33.1
Glyma.14G138000 Glycine max HOM05D006943 ORTHO05D008565 2.9e-22 110.2 327 30.9
Glyma.17G194700 Glycine max HOM05D006943 ORTHO05D008565 3.2e-21 106.7 323 30.7
BraA08t33836Z Brassica rapa HOM05D006943 ORTHO05D008565 7.1e-21 105.5 323 30.7
CSS0049214 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 7.1e-21 105.5 136 47.1
Sp7g29130 Schrenkiella parvula HOM05D006943 ORTHO05D008565 2.1e-20 104.0 151 41.1
CSS0017346 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 3.5e-20 103.2 136 46.3
CSS0048200 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 3.5e-20 103.2 136 46.3
BcaC01g01105 Brassica carinata HOM05D006943 ORTHO05D008565 6.0e-20 102.4 318 29.2
C03p88130 Brassica napus HOM05D006943 ORTHO05D008565 6.0e-20 102.4 318 29.2
HPP92_021992 Vanilla planifolia HOM05D006943 ORTHO05D008565 6.0e-20 102.4 311 27.3
A08p18750 Brassica napus HOM05D006943 ORTHO05D008565 1.8e-19 100.9 333 29.1
Eucgr.L02411 Eucalyptus grandis HOM05D006943 ORTHO05D008565 3.0e-19 100.1 150 42.7
arahy.Tifrunner.gnm1.ann1.X8DLDE Arachis hypogaea HOM05D006943 ORTHO05D008565 3.9e-19 99.8 373 26.5
Eucgr.C02135 Eucalyptus grandis HOM05D006943 ORTHO05D008565 3.9e-19 99.8 170 41.2
Manes.16G137900 Manihot esculenta HOM05D006943 ORTHO05D008565 3.9e-19 99.8 313 29.4
TPR.G11968 Trifolium pratense HOM05D006943 ORTHO05D008565 3.9e-19 99.8 166 43.4
BolC3t21121H Brassica oleracea HOM05D006943 ORTHO05D008565 5.1e-19 99.4 321 29.0
arahy.Tifrunner.gnm1.ann1.HML22G Arachis hypogaea HOM05D006943 ORTHO05D008565 1.1e-18 98.2 368 27.4
MD15G1104200 Malus domestica HOM05D006943 ORTHO05D008565 1.1e-18 98.2 315 31.1
BcaB03g12686 Brassica carinata HOM05D006943 ORTHO05D008565 2.5e-18 97.1 324 29.0
Prupe.1G456500 Prunus persica HOM05D006943 ORTHO05D008565 3.3e-18 96.7 324 30.2
Aqoxy7G02511 Aquilegia oxysepala HOM05D006943 ORTHO05D008565 2.1e-17 94.0 284 25.4
Hund03260 Selenicereus undatus HOM05D006943 ORTHO05D008565 1.4e-16 91.3 82 52.4
Potri.006G279100 Populus trichocarpa HOM05D006943 ORTHO05D008565 6.9e-16 89.0 73 53.4
MBI16_g00837_MAGBIO Magnolia biondii HOM05D006943 ORTHO05D008565 9.0e-16 88.6 297 28.3
FvH4_2g36510 Fragaria vesca HOM05D006943 ORTHO05D008565 2.0e-15 87.4 78 53.8
PSO170G5679 Papaver somniferum HOM05D006943 ORTHO05D008565 2.0e-15 87.4 134 35.8
PSO063G4511 Papaver somniferum HOM05D006943 ORTHO05D008565 2.6e-15 87.0 134 35.8
FAN27G2029 Fragaria x ananassa HOM05D006943 ORTHO05D008565 3.4e-15 86.7 84 50.0
CDE02G0425 Ceratophyllum demersum HOM05D006943 ORTHO05D008565 5.8e-15 85.9 308 24.7
RcHm_v2.0_Chr6g0305361 Rosa chinensis HOM05D006943 ORTHO05D008565 7.6e-15 85.5 78 52.6
FAN20G3130 Fragaria x ananassa HOM05D006943 ORTHO05D008565 2.9e-14 83.6 178 33.1
Potri.018G002801 Populus trichocarpa HOM05D006943 ORTHO05D008565 6.4e-14 82.4 72 51.4
FAN15G2754 Fragaria x ananassa HOM05D006943 ORTHO05D008565 8.4e-14 82.0 172 32.0
ATR0626G281 Amborella trichopoda HOM05D006943 ORTHO05D008565 1.4e-13 81.3 305 25.9
MD08G1124900 Malus domestica HOM05D006943 ORTHO05D008565 2.7e-12 77.0 311 28.3
Actinidia03335 Actinidia chinensis HOM05D006943 ORTHO05D008565 3.9e-11 73.2 267 29.2
Atru.chr6.219 Acer truncatum HOM05D006943 ORTHO05D008565 5.1e-11 72.8 61 54.1
Rhsim01G0256100 Rhododendron simsii HOM05D006943 ORTHO05D008565 1.5e-10 71.2 78 47.4
Zm00001eb233350 Zea mays HOM05D006943 ORTHO05D008565 2.8e-09 67.0 313 24.6
Thecc.09G002300 Theobroma cacao HOM05D006943 ORTHO05D008565 2.4e-08 63.9 63 46.0
VMungo0331G1831 Vigna mungo HOM05D006943 ORTHO05D008565 9.0e-08 62.0 186 30.6
CSS0045137 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 1.2e-07 61.6 135 35.6
VMungo0720G0266 Vigna mungo HOM05D006943 ORTHO05D008565 3.4e-07 60.1 179 30.7
Os02g0174300 Oryza sativa ssp. japonica HOM05D006943 ORTHO05D008565 8.4e-06 55.5 322 23.6


User provided reference genes

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